RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 UBR1Q8IWV7 1749 aa0.27□□□□□ -2.37
SNRPF-202ENST00000549580 ANKRD17O75179 2603 aaKnown RBP0.27□□□□□ -2.37
SNRPF-202ENST00000549580 SNRPFP62306 86 aaKnown RBP0.27□□□□□ -2.37
SNRPF-202ENST00000549580 DEFB112Q30KQ8 113 aa0.27□□□□□ -2.37
SNRPF-202ENST00000549580 PKD1L3Q7Z443 1732 aa0.27□□□□□ -2.37
SNRPF-202ENST00000549580 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
SNRPF-202ENST00000549580 SPTY2D1-AS1A0A0U1RR47 76 aa0.26□□□□□ -2.37
SNRPF-202ENST00000549580 APLNQ9ULZ1 77 aa0.26□□□□□ -2.37
SNRPF-202ENST00000549580 NKTRP30414 1462 aaKnown RBP0.26□□□□□ -2.37
SNRPF-202ENST00000549580 NEXMIFQ5QGS0 1516 aa0.26□□□□□ -2.37
SNRPF-202ENST00000549580 A0A1B0GUT8 65 aa0.25□□□□□ -2.37
SNRPF-202ENST00000549580 IQCF6A8MYZ5 107 aa0.25□□□□□ -2.37
SNRPF-202ENST00000549580 PIEZO2Q9H5I5 2752 aa0.25□□□□□ -2.37
SNRPF-202ENST00000549580 COL14A1Q05707 1796 aaKnown RBP0.24□□□□□ -2.37
SNRPF-202ENST00000549580 ALKQ9UM73 1620 aa0.24□□□□□ -2.37
SNRPF-202ENST00000549580 RB1CC1Q8TDY2 1594 aa0.24□□□□□ -2.37
SNRPF-202ENST00000549580 MYMXA0A1B0GTQ4 84 aa0.24□□□□□ -2.37
SNRPF-202ENST00000549580 KLK9Q2XQG4 91 aa0.24□□□□□ -2.37
SNRPF-202ENST00000549580 LINC00643Q86TS7 51 aa0.24□□□□□ -2.37
SNRPF-202ENST00000549580 PPLO60437 1756 aa0.24□□□□□ -2.37
SNRPF-202ENST00000549580 UACAQ9BZF9 1416 aa0.23□□□□□ -2.37
SNRPF-202ENST00000549580 HIVEP3Q5T1R4 2406 aa0.23□□□□□ -2.37
SNRPF-202ENST00000549580 ATP7BP35670 1465 aa0.22□□□□□ -2.37
SNRPF-202ENST00000549580 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
SNRPF-202ENST00000549580 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
SNRPF-202ENST00000549580 HRNRQ86YZ3 2850 aaPredicted RBP0.22□□□□□ -2.37
SNRPF-202ENST00000549580 ACYP1P07311 99 aa0.22□□□□□ -2.37
SNRPF-202ENST00000549580 MRPL34Q9BQ48 92 aaKnown RBP0.22□□□□□ -2.37
SNRPF-202ENST00000549580 CCL22O00626 93 aa0.21□□□□□ -2.38
SNRPF-202ENST00000549580 CLIP1P30622 1438 aa0.21□□□□□ -2.38
SNRPF-202ENST00000549580 NCOR1O75376 2440 aa0.21□□□□□ -2.38
SNRPF-202ENST00000549580 GVINP1Q7Z2Y8 2422 aa0.21□□□□□ -2.38
SNRPF-202ENST00000549580 KIF14Q15058 1648 aa0.2□□□□□ -2.38
SNRPF-202ENST00000549580 UBR3Q6ZT12 1888 aa0.2□□□□□ -2.38
SNRPF-202ENST00000549580 MAP3K4Q9Y6R4 1608 aa0.2□□□□□ -2.38
SNRPF-202ENST00000549580 KANTRA0A1W2PQU2 76 aa0.2□□□□□ -2.38
SNRPF-202ENST00000549580 LOC730098B7Z3J9 87 aa0.2□□□□□ -2.38
SNRPF-202ENST00000549580 ABCA2Q9BZC7 2435 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 MAGI2Q86UL8 1455 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 CEBPZOSA8MTT3 80 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 COX7BP24311 80 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 TDRG1Q3Y452 100 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 H1FX-AS1Q4G0G2 97 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 GAFA1Q96PS6 74 aa0.19□□□□□ -2.38
SNRPF-202ENST00000549580 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
SNRPF-202ENST00000549580 QSER1Q2KHR3 1735 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 LRRC7Q96NW7 1537 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 TENM4Q6N022 2769 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 MACF1Q9UPN3 7388 aaKnown RBP0.18□□□□□ -2.38
SNRPF-202ENST00000549580 CSMD3Q7Z407 3707 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 PTPN13Q12923 2485 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 RPL38P63173 70 aaKnown RBP0.18□□□□□ -2.38
SNRPF-202ENST00000549580 RGPD2P0DJD1 1756 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 VWFP04275 2813 aa0.18□□□□□ -2.38
SNRPF-202ENST00000549580 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
SNRPF-202ENST00000549580 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
SNRPF-202ENST00000549580 PRM1P04553 51 aa0.17□□□□□ -2.38
SNRPF-202ENST00000549580 SUPT6HQ7KZ85 1726 aaKnown RBP0.17□□□□□ -2.38
SNRPF-202ENST00000549580 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
SNRPF-202ENST00000549580 CSPG4Q6UVK1 2322 aa0.16□□□□□ -2.38
SNRPF-202ENST00000549580 MED14O60244 1454 aa0.16□□□□□ -2.38
SNRPF-202ENST00000549580 LRRC9Q6ZRR7 1453 aa0.16□□□□□ -2.38
SNRPF-202ENST00000549580 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
SNRPF-202ENST00000549580 HEPN1Q6WQI6 88 aa0.16□□□□□ -2.38
SNRPF-202ENST00000549580 TMEM131LA2VDJ0 1609 aa0.16□□□□□ -2.38
SNRPF-202ENST00000549580 RGPD1P0DJD0 1748 aa0.16□□□□□ -2.38
SNRPF-202ENST00000549580 S100A13Q99584 98 aa0.15□□□□□ -2.39
SNRPF-202ENST00000549580 CHD6Q8TD26 2715 aa0.15□□□□□ -2.39
SNRPF-202ENST00000549580 CCDC18Q5T9S5 1454 aa0.15□□□□□ -2.39
SNRPF-202ENST00000549580 TRAV21A0A0B4J279 112 aa0.14□□□□□ -2.39
SNRPF-202ENST00000549580 NDUFB1O75438 58 aa0.14□□□□□ -2.39
SNRPF-202ENST00000549580 ADIRFQ15847 76 aa0.14□□□□□ -2.39
SNRPF-202ENST00000549580 WFDC9Q8NEX5 89 aa0.14□□□□□ -2.39
SNRPF-202ENST00000549580 ST20Q9HBF5 79 aa0.14□□□□□ -2.39
SNRPF-202ENST00000549580 CDKN2A-AS1Q9UH64 79 aa0.14□□□□□ -2.39
SNRPF-202ENST00000549580 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
SNRPF-202ENST00000549580 SPRR2DP22532 72 aa0.13□□□□□ -2.39
SNRPF-202ENST00000549580 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
SNRPF-202ENST00000549580 URB2Q14146 1524 aaKnown RBP0.11□□□□□ -2.39
SNRPF-202ENST00000549580 CACNA1AO00555 2505 aa0.11□□□□□ -2.39
SNRPF-202ENST00000549580 RGPD8O14715 1765 aaPredicted RBP0.1□□□□□ -2.39
SNRPF-202ENST00000549580 LTN1O94822 1766 aa0.1□□□□□ -2.39
SNRPF-202ENST00000549580 RGPD5Q99666 1765 aa0.1□□□□□ -2.39
SNRPF-202ENST00000549580 SPTA1P02549 2419 aa0.1□□□□□ -2.39
SNRPF-202ENST00000549580 PREX1Q8TCU6 1659 aa0.1□□□□□ -2.39
SNRPF-202ENST00000549580 M0R2T5 61 aa0.09□□□□□ -2.4
SNRPF-202ENST00000549580 LELP1Q5T871 98 aa0.08□□□□□ -2.4
SNRPF-202ENST00000549580 COX6B2Q6YFQ2 88 aa0.08□□□□□ -2.4
SNRPF-202ENST00000549580 POLR1AO95602 1720 aaPredicted RBP0.07□□□□□ -2.4
SNRPF-202ENST00000549580 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
SNRPF-202ENST00000549580 WFDC13Q8IUB5 93 aa0.07□□□□□ -2.4
SNRPF-202ENST00000549580 NCOA2Q15596 1464 aa0.07□□□□□ -2.4
SNRPF-202ENST00000549580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.07□□□□□ -2.4
SNRPF-202ENST00000549580 COL7A1Q02388 2944 aa0.07□□□□□ -2.4
SNRPF-202ENST00000549580 PKD1L1Q8TDX9 2849 aa0.06□□□□□ -2.4
SNRPF-202ENST00000549580 ATRQ13535 2644 aa0.06□□□□□ -2.4
SNRPF-202ENST00000549580 USP32Q8NFA0 1604 aa0.06□□□□□ -2.4
SNRPF-202ENST00000549580 HUWE1Q7Z6Z7 4374 aaKnown RBP0.05□□□□□ -2.4
SNRPF-202ENST00000549580 ERVK-7P63135 1459 aa0.05□□□□□ -2.4
SNRPF-202ENST00000549580 DCAF1Q9Y4B6 1507 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms