RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 CFC1P0CG37 223 aa4.38□□□□□ -1.71
COX6A1-202ENST00000549525 SCGB1C2P0DMR2 95 aa4.38□□□□□ -1.71
COX6A1-202ENST00000549525 Q6ZR54 194 aa4.38□□□□□ -1.71
COX6A1-202ENST00000549525 IGLV4-60A0A075B6I1 120 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 IGKV2D-24A0A075B6R9 120 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 A0A087WZ39 114 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 TRAV13-1A0A0B4J241 112 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 TRBV30A0A0K0K1B3 111 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 M0R2N4 97 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 APOMO95445 188 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 CXCL5P42830 114 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
COX6A1-202ENST00000549525 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 MEIG1Q5JSS6 88 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 LINC00336Q6ZUF6 198 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 Q9HAA7 133 aa4.37□□□□□ -1.71
COX6A1-202ENST00000549525 TRAV13-2A0A0B4J235 113 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 IGHV3OR16-9A0A0B4J2B5 98 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 LINC00959A0A1B0GUT2 108 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 SMIM1B2RUZ4 78 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 SPINK8P0C7L1 97 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 PSMB2P49721 201 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 COX17Q14061 63 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 CD164L2Q6UWJ8 174 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 ENHOQ6UWT2 76 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 SMIM29Q86T20 159 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 LYSTQ99698 3801 aa4.36□□□□□ -1.71
COX6A1-202ENST00000549525 LOC107984156A0A0G2JMH3 177 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 COX7A2LO14548 114 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 ATXN8Q156A1 80 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 OCIAD2Q56VL3 154 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 C6orf226Q5I0X4 101 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 ARL17AQ8IVW1 177 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 Q8IZM0 81 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
COX6A1-202ENST00000549525 CHCHD10Q8WYQ3 142 aaPredicted RBP4.35□□□□□ -1.71
COX6A1-202ENST00000549525 IGHV3-64A0A075B6Q5 118 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 F8WDY8 70 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 H3BMG7 143 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 K7ERJ3 54 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 SNCGO76070 127 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 TSPAN13O95857 204 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 XCL1P47992 114 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 COX6A2Q02221 97 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 Q1RN00 199 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 RNASE13Q5GAN3 156 aaKnown RBP4.34□□□□□ -1.71
COX6A1-202ENST00000549525 CLPSL2Q6UWE3 100 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
COX6A1-202ENST00000549525 LINC01600Q96MT4 127 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 LITAFQ99732 161 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
COX6A1-202ENST00000549525 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.72
COX6A1-202ENST00000549525 IGLV10-54A0A075B6I4 117 aa4.33□□□□□ -1.72
COX6A1-202ENST00000549525 LINC00308Q8TCZ7 52 aa4.33□□□□□ -1.72
COX6A1-202ENST00000549525 MT3P25713 68 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 CKS1BP61024 79 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 GAGE2AQ6NT46 116 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 CARD19Q96LW7 228 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
COX6A1-202ENST00000549525 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
COX6A1-202ENST00000549525 H0YGX0 51 aa4.31□□□□□ -1.72
COX6A1-202ENST00000549525 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
COX6A1-202ENST00000549525 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 H3BT86 120 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 NDUFC2O95298 119 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 LINC00158P58513 81 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
COX6A1-202ENST00000549525 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 TEN1Q86WV5 123 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 PPDPFLQ8WWR9 84 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 VPS25Q9BRG1 176 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 ALMS1Q8TCU4 4167 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
COX6A1-202ENST00000549525 A0A087WTM6 91 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 GVQW2A0A096LPI5 108 aaPredicted RBP4.29□□□□□ -1.72
COX6A1-202ENST00000549525 H3BQ85 93 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 TCL1BO95988 128 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
COX6A1-202ENST00000549525 Q8N814 137 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
COX6A1-202ENST00000549525 TOMM7Q9P0U1 55 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
COX6A1-202ENST00000549525 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 A0A1B0GX51 115 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 LRCOL1A6NCL2 159 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 RTL8CO15255 209 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 SLC25A20O43772 301 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 TRACP01848 142 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
COX6A1-202ENST00000549525 RPL28P46779 137 aaKnown RBP4.28□□□□□ -1.72
COX6A1-202ENST00000549525 WFDC2Q14508 124 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
COX6A1-202ENST00000549525 ANKRD29Q8N6D5 301 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms