RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 SERTAD4-AS1Q5TG53 156 aa5.52□□□□□ -1.53
SMARCC2-205ENST00000548130 ZNF625Q96I27 306 aaPredicted RBP5.52□□□□□ -1.53
SMARCC2-205ENST00000548130 M0QXV9 152 aa5.51□□□□□ -1.53
SMARCC2-205ENST00000548130 PFN2P35080 140 aa5.51□□□□□ -1.53
SMARCC2-205ENST00000548130 KRTAP11-1Q8IUC1 163 aa5.51□□□□□ -1.53
SMARCC2-205ENST00000548130 MAP1LC3CQ9BXW4 147 aa5.51□□□□□ -1.53
SMARCC2-205ENST00000548130 HERC1Q15751 4861 aa5.5□□□□□ -1.53
SMARCC2-205ENST00000548130 ERG28Q9UKR5 140 aa5.5□□□□□ -1.53
SMARCC2-205ENST00000548130 DPM2O94777 84 aa5.49□□□□□ -1.53
SMARCC2-205ENST00000548130 PLNP26678 52 aa5.49□□□□□ -1.53
SMARCC2-205ENST00000548130 UBE2BP63146 152 aa5.49□□□□□ -1.53
SMARCC2-205ENST00000548130 COA6Q5JTJ3 125 aaKnown RBP5.49□□□□□ -1.53
SMARCC2-205ENST00000548130 PSORS1C2Q9UIG4 136 aa5.49□□□□□ -1.53
SMARCC2-205ENST00000548130 C22orf24Q9Y442 160 aa5.49□□□□□ -1.53
SMARCC2-205ENST00000548130 A0A0U1RRA0 63 aa5.48□□□□□ -1.53
SMARCC2-205ENST00000548130 SYS1-DBNDD2H3BUS1 97 aa5.48□□□□□ -1.53
SMARCC2-205ENST00000548130 IGKCP01834 107 aa5.48□□□□□ -1.53
SMARCC2-205ENST00000548130 C1orf137Q5JT78 98 aa5.48□□□□□ -1.53
SMARCC2-205ENST00000548130 SRRM2Q9UQ35 2752 aaKnown RBP5.48□□□□□ -1.53
SMARCC2-205ENST00000548130 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 LEPROTO15243 131 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 LINC00158P58513 81 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 TSPEAR-AS2P59090 65 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 HERVK_113P61574 105 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 SFTA2Q6UW10 78 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 SND1-IT1Q9HBX3 110 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 NDUFA12Q9UI09 145 aa5.47□□□□□ -1.53
SMARCC2-205ENST00000548130 MYCBP2O75592 4640 aa5.46□□□□□ -1.53
SMARCC2-205ENST00000548130 GAGE10A6NGK3 116 aa5.46□□□□□ -1.54
SMARCC2-205ENST00000548130 KRTDAPP60985 99 aa5.46□□□□□ -1.54
SMARCC2-205ENST00000548130 LBHQ53QV2 105 aaPredicted RBP5.46□□□□□ -1.54
SMARCC2-205ENST00000548130 MEIG1Q5JSS6 88 aa5.46□□□□□ -1.54
SMARCC2-205ENST00000548130 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
SMARCC2-205ENST00000548130 DMBT1Q9UGM3 2413 aaPredicted RBP5.46□□□□□ -1.54
SMARCC2-205ENST00000548130 MYMXA0A1B0GTQ4 84 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 OXTP01178 125 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 HERV-K104P63124 156 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 COX17Q14061 63 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 LINC01545Q5VT33 79 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 PET117Q6UWS5 81 aa5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 MRPL55Q7Z7F7 128 aaKnown RBP5.45□□□□□ -1.54
SMARCC2-205ENST00000548130 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 IGLV5-37A0A075B6J1 123 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 J3QQQ9 107 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 LGALS3P17931 250 aaKnown RBP5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 SPINK6Q6UWN8 80 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 NKAPP1Q8N9T2 125 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 Q8NDZ9 215 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 LINC00167Q96N53 147 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 TP73-AS1Q9UF72 201 aa5.44□□□□□ -1.54
SMARCC2-205ENST00000548130 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
SMARCC2-205ENST00000548130 VPREB1P12018 145 aa5.43□□□□□ -1.54
SMARCC2-205ENST00000548130 MIR7-3HGQ8N6C7 128 aa5.43□□□□□ -1.54
SMARCC2-205ENST00000548130 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
SMARCC2-205ENST00000548130 E9PLD3 99 aa5.42□□□□□ -1.54
SMARCC2-205ENST00000548130 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
SMARCC2-205ENST00000548130 HIST3H2BBQ8N257 126 aa5.42□□□□□ -1.54
SMARCC2-205ENST00000548130 C20orf202A1L168 122 aa5.41□□□□□ -1.54
SMARCC2-205ENST00000548130 LINC00587B1AMM8 73 aa5.41□□□□□ -1.54
SMARCC2-205ENST00000548130 NMUP48645 174 aa5.41□□□□□ -1.54
SMARCC2-205ENST00000548130 BOD1L2Q8IYS8 172 aa5.41□□□□□ -1.54
SMARCC2-205ENST00000548130 DAND5Q8N907 189 aa5.41□□□□□ -1.54
SMARCC2-205ENST00000548130 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
SMARCC2-205ENST00000548130 IGKV2-28A0A075B6P5 120 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 IGKV2D-26A0A0A0MRZ7 120 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 IGKV2D-28P01615 120 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 S100A6P06703 90 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 S100A2P29034 98 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 REG3GQ6UW15 175 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 ATOH7Q8N100 152 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 HIST1H2BLQ99880 126 aa5.4□□□□□ -1.54
SMARCC2-205ENST00000548130 A0A0J9YXY3 114 aa5.39□□□□□ -1.55
SMARCC2-205ENST00000548130 BCE1O60756 84 aa5.39□□□□□ -1.55
SMARCC2-205ENST00000548130 DIRC1Q969H9 104 aa5.39□□□□□ -1.55
SMARCC2-205ENST00000548130 LINC01600Q96MT4 127 aa5.39□□□□□ -1.55
SMARCC2-205ENST00000548130 TTTY13Q9BZ97 58 aa5.39□□□□□ -1.55
SMARCC2-205ENST00000548130 IGLV1-50A0A075B6I6 118 aa5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 TMEM238C9JI98 176 aa5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 H0Y9J4 135 aa5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 NCR3O14931 201 aa5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 ZNF861PO60384 105 aa5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 NPC2P61916 151 aa5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
SMARCC2-205ENST00000548130 LOC105371267A0A1B0GV96 52 aa5.37□□□□□ -1.55
SMARCC2-205ENST00000548130 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
SMARCC2-205ENST00000548130 M0R378 163 aa5.37□□□□□ -1.55
SMARCC2-205ENST00000548130 ADAMTSL4-AS1Q5T5F5 129 aa5.37□□□□□ -1.55
SMARCC2-205ENST00000548130 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
SMARCC2-205ENST00000548130 UBE2AP49459 152 aa5.36□□□□□ -1.55
SMARCC2-205ENST00000548130 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
SMARCC2-205ENST00000548130 LOC107984156A0A0G2JMH3 177 aa5.35□□□□□ -1.55
SMARCC2-205ENST00000548130 PRLHP81277 87 aa5.35□□□□□ -1.55
SMARCC2-205ENST00000548130 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
SMARCC2-205ENST00000548130 ARL17AQ8IVW1 177 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms