RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 EPG5Q9HCE0 2579 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 CLTCQ00610 1675 aaKnown RBP-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 TEX14Q8IWB6 1497 aa-0.41□□□□□ -2.48
LEMD3-206ENST00000545026 TRAV30A0A087WSZ9 112 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 UQCRHP07919 91 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 TCEAL7Q9BRU2 100 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 PCLOQ9Y6V0 5065 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 FANCAO15360 1455 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 ALKQ9UM73 1620 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 NBASA2RRP1 2371 aa-0.42□□□□□ -2.48
LEMD3-206ENST00000545026 ANKRD36BQ8N2N9 1353 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 CPSF4LA6NMK7 179 aaKnown RBP-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 I3L3M4 83 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 ATOX1O00244 68 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 S100PP25815 95 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 SPRR2AP35326 72 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 CRIPTQ9P021 101 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 APLNQ9ULZ1 77 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 COL14A1Q05707 1796 aaKnown RBP-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 FAT1Q14517 4588 aa-0.43□□□□□ -2.48
LEMD3-206ENST00000545026 SPG11Q96JI7 2443 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 CNTLNQ9NXG0 1405 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 TMEM218A2RU14 115 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 CCL22O00626 93 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 GNGT2O14610 69 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 KRTAP20-2Q3LI61 65 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 KRTAP6-2Q3LI66 62 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 DEFB107AQ8IZN7 70 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 PMCHL2Q9BQD1 86 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 AP4S1Q9Y587 144 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 SPTBN4Q9H254 2564 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 QSER1Q2KHR3 1735 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 CRYBG1Q9Y4K1 1723 aa-0.44□□□□□ -2.48
LEMD3-206ENST00000545026 USP9YO00507 2555 aaPredicted RBP-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 HERC2O95714 4834 aa-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 NRXN1Q9ULB1 1477 aa-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 GNGT1P63211 74 aa-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 TRGV9Q99603 122 aa-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 PKD1L3Q7Z443 1732 aa-0.45□□□□□ -2.48
LEMD3-206ENST00000545026 KNL1Q8NG31 2342 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 NBPF19A0A087WUL8 3843 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 BCORQ6W2J9 1755 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 ARMS2P0C7Q2 107 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 ASIPP42127 132 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 HMGN3Q15651 99 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 DEFB135Q30KP9 77 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 H1FX-AS1Q4G0G2 97 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 SERP2Q8N6R1 65 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 C14orf144Q96I85 54 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 PTPN23Q9H3S7 1636 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 PREX1Q8TCU6 1659 aa-0.46□□□□□ -2.48
LEMD3-206ENST00000545026 ANKRD26Q9UPS8 1709 aa-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 ADAMTS12P58397 1594 aa-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 MT-ATP8P03928 68 aa-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 LINC00032P0C843 101 aa-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 MRPL34Q9BQ48 92 aaKnown RBP-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 ANKRD36A6QL64 1941 aa-0.47□□□□□ -2.48
LEMD3-206ENST00000545026 HIVEP1P15822 2718 aa-0.47□□□□□ -2.49
LEMD3-206ENST00000545026 CLIP1P30622 1438 aa-0.47□□□□□ -2.49
LEMD3-206ENST00000545026 MYO3AQ8NEV4 1616 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 SPTY2D1-AS1A0A0U1RR47 76 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 ALKAL2Q6UX46 152 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 C9orf62Q8N4C0 152 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 HECTD1Q9ULT8 2610 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 RGPD2P0DJD1 1756 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 KIF20BQ96Q89 1820 aa-0.48□□□□□ -2.49
LEMD3-206ENST00000545026 STARD9Q9P2P6 4700 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 TRBV7-7A0A0K0K1E9 115 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 MT4P47944 62 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 S100A10P60903 97 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 ETDBQ3ZM63 59 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 ZNF720Q7Z2F6 126 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 ACBD7Q8N6N7 88 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 ITPR3Q14573 2671 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 VPS8Q8N3P4 1428 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 UBR4Q5T4S7 5183 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 USH2AO75445 5202 aa-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 SONP18583 2426 aaKnown RBP-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 FASNP49327 2511 aaKnown RBP-0.49□□□□□ -2.49
LEMD3-206ENST00000545026 FAT3Q8TDW7 4589 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 DOPEY1Q5JWR5 2465 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 UQCRHLA0A096LP55 91 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 RBP2P50120 134 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 DEFB112Q30KQ8 113 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 DPY30Q9C005 99 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 TROQ12816 1431 aaPredicted RBP-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 PKD1P98161 4303 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 ATP10BO94823 1461 aa-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.5□□□□□ -2.49
LEMD3-206ENST00000545026 MYO18BQ8IUG5 2567 aa-0.51□□□□□ -2.49
LEMD3-206ENST00000545026 TEP1Q99973 2627 aaKnown RBP-0.51□□□□□ -2.49
LEMD3-206ENST00000545026 TACC2O95359 2948 aa-0.51□□□□□ -2.49
LEMD3-206ENST00000545026 TIAM2Q8IVF5 1701 aa-0.51□□□□□ -2.49
LEMD3-206ENST00000545026 DNAH6Q9C0G6 4158 aa-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 MAGI2Q86UL8 1455 aa-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 UBE2D4Q9Y2X8 147 aa-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 PRRC2CQ9Y520 2896 aaKnown RBP-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms