RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 Q6ZRU5 148 aa3.95□□□□□ -1.78
VPS50-220ENST00000544910 A0A096LNI7 61 aa3.95□□□□□ -1.78
VPS50-220ENST00000544910 C6orf48Q9UBA6 75 aa3.95□□□□□ -1.78
VPS50-220ENST00000544910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.95□□□□□ -1.782e-6■■■■□ 23.8
VPS50-220ENST00000544910 CD164Q04900 197 aa3.95□□□□□ -1.78
VPS50-220ENST00000544910 TLN1Q9Y490 2541 aaKnown RBP3.95□□□□□ -1.78
VPS50-220ENST00000544910 EYSQ5T1H1 3165 aa3.95□□□□□ -1.78
VPS50-220ENST00000544910 SMCR5Q8TEV8 140 aa3.94□□□□□ -1.78
VPS50-220ENST00000544910 SPATA3Q8NHX4 192 aa3.94□□□□□ -1.78
VPS50-220ENST00000544910 TRIOO75962 3097 aa3.94□□□□□ -1.78
VPS50-220ENST00000544910 MYO15AQ9UKN7 3530 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 CYP4F30PQ9H0H9 118 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 ANKRD11Q6UB99 2663 aaPredicted RBP3.93□□□□□ -1.78
VPS50-220ENST00000544910 Q6ZQT0 140 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 C1orf64Q8NEQ6 169 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 LINC01556Q5JQF7 62 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 HIVEP3Q5T1R4 2406 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 NOTCH3Q9UM47 2321 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 GVQW2A0A096LPI5 108 aaPredicted RBP3.93□□□□□ -1.78
VPS50-220ENST00000544910 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
VPS50-220ENST00000544910 LINC00474Q9P2X8 69 aa3.92□□□□□ -1.78
VPS50-220ENST00000544910 ATRXP46100 2492 aa3.92□□□□□ -1.78
VPS50-220ENST00000544910 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
VPS50-220ENST00000544910 REG3GQ6UW15 175 aa3.92□□□□□ -1.78
VPS50-220ENST00000544910 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
VPS50-220ENST00000544910 PIEZO1Q92508 2521 aa3.92□□□□□ -1.78
VPS50-220ENST00000544910 KLKP1Q107X0 134 aa3.92□□□□□ -1.78
VPS50-220ENST00000544910 SPAG11AQ6PDA7 123 aa3.91□□□□□ -1.78
VPS50-220ENST00000544910 CR1P17927 2039 aa3.91□□□□□ -1.78
VPS50-220ENST00000544910 C8orf87E5RJ46 101 aa3.91□□□□□ -1.78
VPS50-220ENST00000544910 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
VPS50-220ENST00000544910 IGLV6-57P01721 117 aa3.91□□□□□ -1.78
VPS50-220ENST00000544910 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.91□□□□□ -1.78
VPS50-220ENST00000544910 WDFY3Q8IZQ1 3526 aa3.91□□□□□ -1.78
VPS50-220ENST00000544910 KIAA0087Q14695 138 aa3.9□□□□□ -1.78
VPS50-220ENST00000544910 A0A087WSZ3 146 aa3.9□□□□□ -1.79
VPS50-220ENST00000544910 LINC00336Q6ZUF6 198 aa3.9□□□□□ -1.79
VPS50-220ENST00000544910 TM2D3Q9BRN9 247 aa3.9□□□□□ -1.79
VPS50-220ENST00000544910 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 LINC00167Q96N53 147 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 A0A1B0GU69 56 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 Q9BRP9 147 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 PRR34Q9NV39 138 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 FREM2Q5SZK8 3169 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 C7orf33Q8WU49 177 aa3.89□□□□□ -1.79
VPS50-220ENST00000544910 SPEGQ15772 3267 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 ACYP2P14621 99 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 IGHV6-1A0A0B4J1U7 121 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 KRTAP24-1Q3LI83 254 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 FAM208BQ5VWN6 2430 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 ABCA2Q9BZC7 2435 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 NCOR2Q9Y618 2525 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 ATP11AUNQ6ZP68 121 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 C22orf24Q9Y442 160 aa3.88□□□□□ -1.79
VPS50-220ENST00000544910 AKAP13Q12802 2813 aa3.87□□□□□ -1.79
VPS50-220ENST00000544910 RETNLBQ9BQ08 111 aa3.87□□□□□ -1.79
VPS50-220ENST00000544910 CEP295Q9C0D2 2601 aa3.87□□□□□ -1.79
VPS50-220ENST00000544910 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
VPS50-220ENST00000544910 CSPG4Q6UVK1 2322 aa3.87□□□□□ -1.79
VPS50-220ENST00000544910 NUPR2A6NF83 97 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 COL6A3P12111 3177 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 H7BZZ5 65 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 Q6ZRP5 223 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 HIVEP2P31629 2446 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 OBSCN-AS1Q96MR7 158 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 DNAH10OSP0CZ25 163 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 C15orf56Q8N910 161 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 Q8NBF4 154 aa3.86□□□□□ -1.79
VPS50-220ENST00000544910 LINC00588Q9Y4M8 146 aa3.85□□□□□ -1.79
VPS50-220ENST00000544910 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
VPS50-220ENST00000544910 PRR15Q8IV56 129 aa3.85□□□□□ -1.79
VPS50-220ENST00000544910 A8MUN3 132 aa3.85□□□□□ -1.79
VPS50-220ENST00000544910 C7orf65Q6ZTY9 151 aa3.85□□□□□ -1.79
VPS50-220ENST00000544910 Q6ZRX8 168 aa3.85□□□□□ -1.79
VPS50-220ENST00000544910 CELSR3Q9NYQ7 3312 aa3.85□□□□□ -1.79
VPS50-220ENST00000544910 TRAV22A0A0B4J277 110 aa3.84□□□□□ -1.79
VPS50-220ENST00000544910 SORL1Q92673 2214 aa3.84□□□□□ -1.79
VPS50-220ENST00000544910 LCA10Q71F78 164 aa3.84□□□□□ -1.79
VPS50-220ENST00000544910 SPG11Q96JI7 2443 aa3.84□□□□□ -1.79
VPS50-220ENST00000544910 M0R2N4 97 aa3.84□□□□□ -1.79
VPS50-220ENST00000544910 NAV2Q8IVL1 2488 aa3.84□□□□□ -1.8
VPS50-220ENST00000544910 DEFB116Q30KQ4 102 aa3.84□□□□□ -1.8
VPS50-220ENST00000544910 LOC101927531A0A1B0GV80 90 aa3.83□□□□□ -1.8
VPS50-220ENST00000544910 PRRC2CQ9Y520 2896 aaKnown RBP3.83□□□□□ -1.8
VPS50-220ENST00000544910 WNK1Q9H4A3 2382 aa3.83□□□□□ -1.8
VPS50-220ENST00000544910 DOPEY1Q5JWR5 2465 aa3.83□□□□□ -1.8
VPS50-220ENST00000544910 ANKRD17O75179 2603 aaKnown RBP3.83□□□□□ -1.8
VPS50-220ENST00000544910 KCNQ1DNQ9H478 68 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 VPS13AQ96RL7 3174 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 DMDP11532 3685 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 TRBV7-4A0A0J9YYF1 115 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 PRLHP81277 87 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 LINC00528Q8N1L1 170 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
VPS50-220ENST00000544910 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 COA5Q86WW8 74 aa3.81□□□□□ -1.8
VPS50-220ENST00000544910 CFAP54Q96N23 3096 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms