RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 SOSTDC1Q6X4U4 206 aa3.25□□□□□ -1.89
CNGA1-209ENST00000544810 C20orf197Q8N268 126 aa3.25□□□□□ -1.89
CNGA1-209ENST00000544810 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
CNGA1-209ENST00000544810 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
CNGA1-209ENST00000544810 C14orf132Q9NPU4 83 aa3.25□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV3-66A0A0C4DH42 116 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 NDUFA4O00483 81 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 CRPP02741 224 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 SAA4P35542 130 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 C6orf226Q5I0X4 101 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 CLEC19AQ6UXS0 136 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 Q8N9W7 124 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 ZNF625Q96I27 306 aaPredicted RBP3.24□□□□□ -1.89
CNGA1-209ENST00000544810 PKIGQ9Y2B9 76 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 LYSTQ99698 3801 aa3.24□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV3OR16-8A0A075B7F1 116 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 CHCHD7Q9BUK0 85 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV3-35A0A0C4DH35 117 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 BLCAPP62952 87 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 UBL5Q9BZL1 73 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 Q9HAA7 133 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 CDKN2A-AS1Q9UH64 79 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 STARD9Q9P2P6 4700 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 DNAH7Q8WXX0 4024 aa3.23□□□□□ -1.89
CNGA1-209ENST00000544810 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 TRBV7-6A0A0J9YX20 115 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 IBA57-AS1B1ANH7 110 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 ORMDL1Q9P0S3 153 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 HUWE1Q7Z6Z7 4374 aaKnown RBP3.22□□□□□ -1.89
CNGA1-209ENST00000544810 TRAV23DV6A0A075B6W5 121 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV1OR15-1A0A075B7D0 117 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 SMIM1B2RUZ4 78 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 H3BUA1 57 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 ATP6V0E1O15342 81 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 SS18Q15532 418 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 ECSCRQ19T08 205 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV3OR16-13A0A075B7E8 117 aa3.21□□□□□ -1.89
CNGA1-209ENST00000544810 A0A087WYN8 130 aa3.21□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.89
CNGA1-209ENST00000544810 IGHV4-30-4P0DP06 118 aa3.21□□□□□ -1.89
CNGA1-209ENST00000544810 C9orf129Q5T035 196 aaKnown RBP3.21□□□□□ -1.89
CNGA1-209ENST00000544810 Q6ZRU5 148 aa3.21□□□□□ -1.89
CNGA1-209ENST00000544810 BRK1Q8WUW1 75 aa3.21□□□□□ -1.89
CNGA1-209ENST00000544810 TMEM256-PLSCR3K7ERE1 68 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 C10orf25Q5T742 122 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 LINC00337Q8N6G1 96 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 PRR26Q8N8Z3 221 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 SMIM11BQ8TCY0 68 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 IGHV3-49A0A0A0MS15 119 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 PLAC8L1A1L4L8 177 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 IGKV2-29A2NJV5 120 aaPredicted RBP3.21□□□□□ -1.9
CNGA1-209ENST00000544810 A6NDX4 124 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 F8WEM9 126 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 K7EMT4 169 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 CXCL6P80162 114 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 LINC00242Q5T6M2 205 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 ENHOQ6UWT2 76 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 MIR7-3HGQ8N6C7 128 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 TM2D3Q9BRN9 247 aa3.21□□□□□ -1.9
CNGA1-209ENST00000544810 NCR3O14931 201 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 RBM3P98179 157 aaKnown RBP3.2□□□□□ -1.9
CNGA1-209ENST00000544810 FAM19A1Q7Z5A9 133 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 USMG5Q96IX5 58 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 LOC110117498A0A087WWA1 95 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 TRBV7-4A0A0J9YYF1 115 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 F6UB75 175 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 H3BQ85 93 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 LECT2O14960 151 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 SND1-IT1Q9HBX3 110 aa3.2□□□□□ -1.9
CNGA1-209ENST00000544810 PLECQ15149 4684 aaKnown RBP3.19□□□□□ -1.9
CNGA1-209ENST00000544810 LY6G6CO95867 125 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 PDE6GP18545 87 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 COX6A2Q02221 97 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 C9orf66Q5T8R8 295 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 C10orf99Q6UWK7 81 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 LINC00467Q9BRT7 94 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 MOB4Q9Y3A3 225 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 IGLV5-52A0A0A0MRZ9 124 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 IGHV3-53P01767 116 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 MIFP14174 115 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 UNQ9165/PRO28630Q6UXU0 137 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 RHPN1-AS1Q9BWJ2 59 aa3.19□□□□□ -1.9
CNGA1-209ENST00000544810 G3V318 75 aa3.18□□□□□ -1.9
CNGA1-209ENST00000544810 CD164Q04900 197 aa3.18□□□□□ -1.9
CNGA1-209ENST00000544810 RNASE13Q5GAN3 156 aaKnown RBP3.18□□□□□ -1.9
CNGA1-209ENST00000544810 C5orf56Q8N8D9 126 aa3.18□□□□□ -1.9
CNGA1-209ENST00000544810 DYNLRB2Q8TF09 96 aa3.18□□□□□ -1.9
CNGA1-209ENST00000544810 RMI2Q96E14 147 aa3.18□□□□□ -1.9
CNGA1-209ENST00000544810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.18□□□□□ -1.9
CNGA1-209ENST00000544810 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms