RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 E9PLD3 99 aa8.45□□□□□ -1.06
LTBR-213ENST00000544454 S100A6P06703 90 aa8.45□□□□□ -1.06
LTBR-213ENST00000544454 NMUP48645 174 aa8.45□□□□□ -1.06
LTBR-213ENST00000544454 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
LTBR-213ENST00000544454 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
LTBR-213ENST00000544454 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
LTBR-213ENST00000544454 LRP1Q07954 4544 aaKnown RBP8.44□□□□□ -1.06
LTBR-213ENST00000544454 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
LTBR-213ENST00000544454 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
LTBR-213ENST00000544454 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
LTBR-213ENST00000544454 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
LTBR-213ENST00000544454 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
LTBR-213ENST00000544454 SPINK6Q6UWN8 80 aa8.44□□□□□ -1.06
LTBR-213ENST00000544454 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
LTBR-213ENST00000544454 HIST3H2BBQ8N257 126 aa8.44□□□□□ -1.06
LTBR-213ENST00000544454 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
LTBR-213ENST00000544454 C20orf202A1L168 122 aa8.43□□□□□ -1.06
LTBR-213ENST00000544454 OXTP01178 125 aa8.43□□□□□ -1.06
LTBR-213ENST00000544454 S100A2P29034 98 aa8.43□□□□□ -1.06
LTBR-213ENST00000544454 AKR1D1P51857 326 aa8.43□□□□□ -1.06
LTBR-213ENST00000544454 RPL24P83731 157 aaKnown RBP8.43□□□□□ -1.06
LTBR-213ENST00000544454 FAT3Q8TDW7 4589 aa8.42□□□□□ -1.06
LTBR-213ENST00000544454 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
LTBR-213ENST00000544454 LINC00167Q96N53 147 aa8.42□□□□□ -1.06
LTBR-213ENST00000544454 HIST1H2BLQ99880 126 aa8.42□□□□□ -1.06
LTBR-213ENST00000544454 VPREB1P12018 145 aa8.41□□□□□ -1.06
LTBR-213ENST00000544454 MIR7-3HGQ8N6C7 128 aa8.41□□□□□ -1.06
LTBR-213ENST00000544454 IGLV7-43P04211 117 aa8.4□□□□□ -1.06
LTBR-213ENST00000544454 DMBT1Q9UGM3 2413 aaPredicted RBP8.39□□□□□ -1.07
LTBR-213ENST00000544454 J3QL48 77 aa8.39□□□□□ -1.07
LTBR-213ENST00000544454 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
LTBR-213ENST00000544454 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
LTBR-213ENST00000544454 SNRPEP62304 92 aaKnown RBP8.38□□□□□ -1.07
LTBR-213ENST00000544454 LOC107984156A0A0G2JMH3 177 aa8.37□□□□□ -1.07
LTBR-213ENST00000544454 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
LTBR-213ENST00000544454 C5orf52A6NGY3 159 aa8.37□□□□□ -1.07
LTBR-213ENST00000544454 ARL17AQ8IVW1 177 aa8.37□□□□□ -1.07
LTBR-213ENST00000544454 Q8NDZ9 215 aa8.37□□□□□ -1.07
LTBR-213ENST00000544454 HERC1Q15751 4861 aa8.37□□□□□ -1.07
LTBR-213ENST00000544454 IGKV2D-26A0A0A0MRZ7 120 aa8.36□□□□□ -1.07
LTBR-213ENST00000544454 LCE2BO14633 110 aa8.36□□□□□ -1.07
LTBR-213ENST00000544454 REG3GQ6UW15 175 aa8.36□□□□□ -1.07
LTBR-213ENST00000544454 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
LTBR-213ENST00000544454 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
LTBR-213ENST00000544454 IGLV1-50A0A075B6I6 118 aa8.35□□□□□ -1.07
LTBR-213ENST00000544454 M0R378 163 aa8.35□□□□□ -1.07
LTBR-213ENST00000544454 BCE1O60756 84 aa8.35□□□□□ -1.07
LTBR-213ENST00000544454 ZNF815PA8K554 130 aa8.34□□□□□ -1.07
LTBR-213ENST00000544454 ZNF861PO60384 105 aa8.34□□□□□ -1.07
LTBR-213ENST00000544454 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
LTBR-213ENST00000544454 DAND5Q8N907 189 aa8.34□□□□□ -1.07
LTBR-213ENST00000544454 IGKV2-28A0A075B6P5 120 aa8.33□□□□□ -1.08
LTBR-213ENST00000544454 TIMM17BO60830 172 aa8.33□□□□□ -1.08
LTBR-213ENST00000544454 IGKV2D-28P01615 120 aa8.33□□□□□ -1.08
LTBR-213ENST00000544454 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
LTBR-213ENST00000544454 LINC01600Q96MT4 127 aa8.33□□□□□ -1.08
LTBR-213ENST00000544454 MIEN1Q9BRT3 115 aa8.33□□□□□ -1.08
LTBR-213ENST00000544454 H0Y9J4 135 aa8.32□□□□□ -1.08
LTBR-213ENST00000544454 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
LTBR-213ENST00000544454 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
LTBR-213ENST00000544454 LITAFQ99732 161 aa8.31□□□□□ -1.08
LTBR-213ENST00000544454 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
LTBR-213ENST00000544454 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
LTBR-213ENST00000544454 NDUFC2O95298 119 aa8.3□□□□□ -1.08
LTBR-213ENST00000544454 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
LTBR-213ENST00000544454 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
LTBR-213ENST00000544454 HSBP1L1C9JCN9 74 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 NCR3O14931 201 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 SCGB1D1O95968 90 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
LTBR-213ENST00000544454 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
LTBR-213ENST00000544454 UBE2AP49459 152 aa8.27□□□□□ -1.09
LTBR-213ENST00000544454 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
LTBR-213ENST00000544454 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
LTBR-213ENST00000544454 LINC00308Q8TCZ7 52 aa8.27□□□□□ -1.09
LTBR-213ENST00000544454 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
LTBR-213ENST00000544454 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
LTBR-213ENST00000544454 NPC2P61916 151 aa8.26□□□□□ -1.09
LTBR-213ENST00000544454 S100A12P80511 92 aa8.26□□□□□ -1.09
LTBR-213ENST00000544454 TNXBP22105 4242 aa8.26□□□□□ -1.09
LTBR-213ENST00000544454 TRBV10-3A0A0K0K1G6 114 aa8.25□□□□□ -1.09
LTBR-213ENST00000544454 PRYO14603 147 aa8.25□□□□□ -1.09
LTBR-213ENST00000544454 DDTP30046 118 aa8.24□□□□□ -1.09
LTBR-213ENST00000544454 Q6ZVH6 145 aa8.24□□□□□ -1.09
LTBR-213ENST00000544454 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
LTBR-213ENST00000544454 COPS9Q8WXC6 57 aa8.24□□□□□ -1.09
LTBR-213ENST00000544454 SPANXDQ9BXN6 97 aa8.24□□□□□ -1.09
LTBR-213ENST00000544454 SPANXCQ9NY87 97 aa8.24□□□□□ -1.09
LTBR-213ENST00000544454 IGLV6-57P01721 117 aa8.23□□□□□ -1.09
LTBR-213ENST00000544454 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
LTBR-213ENST00000544454 SPRR1AP35321 89 aa8.23□□□□□ -1.09
LTBR-213ENST00000544454 S100A7L2Q5SY68 101 aa8.23□□□□□ -1.09
LTBR-213ENST00000544454 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
LTBR-213ENST00000544454 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
LTBR-213ENST00000544454 IFITM1P13164 125 aa8.22□□□□□ -1.09
LTBR-213ENST00000544454 PRLHP81277 87 aa8.22□□□□□ -1.09
LTBR-213ENST00000544454 LINC00518Q8N0U6 118 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms