RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NDUFC2O95298 119 aa19.71■□□□□ 0.75
CCM2-219ENST00000544363 Q8N814 137 aa19.71■□□□□ 0.75
CCM2-219ENST00000544363 IGKV2-28A0A075B6P5 120 aa19.7■□□□□ 0.74
CCM2-219ENST00000544363 IGKV2D-28P01615 120 aa19.7■□□□□ 0.74
CCM2-219ENST00000544363 RPL18AQ02543 176 aaKnown RBP19.69■□□□□ 0.74
CCM2-219ENST00000544363 A0A1B0GV90 55 aa19.69■□□□□ 0.74
CCM2-219ENST00000544363 LOC107984640A0A0U1RRK4 108 aa19.68■□□□□ 0.74
CCM2-219ENST00000544363 H3BUT2 72 aa19.68■□□□□ 0.74
CCM2-219ENST00000544363 TSPAN13O95857 204 aa19.68■□□□□ 0.74
CCM2-219ENST00000544363 NAA38Q9BRA0 125 aaKnown RBP19.68■□□□□ 0.74
CCM2-219ENST00000544363 Q8NDZ9 215 aa19.66■□□□□ 0.74
CCM2-219ENST00000544363 TRAV13-2A0A0B4J235 113 aa19.65■□□□□ 0.74
CCM2-219ENST00000544363 LINC00337Q8N6G1 96 aa19.65■□□□□ 0.74
CCM2-219ENST00000544363 RPL13AP40429 203 aaKnown RBP19.65■□□□□ 0.74
CCM2-219ENST00000544363 H7C2G1 150 aa19.64■□□□□ 0.73
CCM2-219ENST00000544363 PRR3P79522 188 aaKnown RBP19.63■□□□□ 0.73
CCM2-219ENST00000544363 C9orf129Q5T035 196 aaKnown RBP19.63■□□□□ 0.73
CCM2-219ENST00000544363 LCE6AA0A183 80 aa19.62■□□□□ 0.73
CCM2-219ENST00000544363 GAGE2BQ13066 116 aa19.61■□□□□ 0.73
CCM2-219ENST00000544363 C9orf163Q8N9P6 203 aa19.61■□□□□ 0.73
CCM2-219ENST00000544363 Q1RN00 199 aa19.6■□□□□ 0.73
CCM2-219ENST00000544363 HYDINQ4G0P3 5121 aa19.58■□□□□ 0.73
CCM2-219ENST00000544363 A0A1W2PPM0 123 aa19.58■□□□□ 0.73
CCM2-219ENST00000544363 RTL8CO15255 209 aa19.58■□□□□ 0.73
CCM2-219ENST00000544363 DNAH17Q9UFH2 4485 aa19.58■□□□□ 0.72
CCM2-219ENST00000544363 NCR3O14931 201 aa19.58■□□□□ 0.72
CCM2-219ENST00000544363 VPREB1P12018 145 aa19.57■□□□□ 0.72
CCM2-219ENST00000544363 TNP2Q05952 138 aa19.56■□□□□ 0.72
CCM2-219ENST00000544363 OR13C6PQ8NH95 151 aa19.55■□□□□ 0.72
CCM2-219ENST00000544363 FRAS1Q86XX4 4008 aa19.55■□□□□ 0.72
CCM2-219ENST00000544363 TRBV10-2A0A0K0K1G8 114 aa19.54■□□□□ 0.72
CCM2-219ENST00000544363 SACSQ9NZJ4 4579 aa19.54■□□□□ 0.72
CCM2-219ENST00000544363 C16orf90A8MZG2 172 aa19.54■□□□□ 0.72
CCM2-219ENST00000544363 PKIGQ9Y2B9 76 aa19.54■□□□□ 0.72
CCM2-219ENST00000544363 FABP2P12104 132 aa19.53■□□□□ 0.72
CCM2-219ENST00000544363 PLA2G2DQ9UNK4 145 aa19.53■□□□□ 0.72
CCM2-219ENST00000544363 PSMB2P49721 201 aa19.52■□□□□ 0.72
CCM2-219ENST00000544363 A0A096LNI7 61 aa19.51■□□□□ 0.71
CCM2-219ENST00000544363 VAMP3Q15836 100 aa19.51■□□□□ 0.71
CCM2-219ENST00000544363 TMEM126AQ9H061 195 aa19.5■□□□□ 0.71
CCM2-219ENST00000544363 LINC01620Q4KN68 170 aa19.48■□□□□ 0.71
CCM2-219ENST00000544363 S100A7L2Q5SY68 101 aa19.48■□□□□ 0.71
CCM2-219ENST00000544363 SERTAD4-AS1Q5TG53 156 aa19.48■□□□□ 0.71
CCM2-219ENST00000544363 SDIM1Q6ZPB5 146 aa19.48■□□□□ 0.71
CCM2-219ENST00000544363 TRIAP1O43715 76 aa19.47■□□□□ 0.71
CCM2-219ENST00000544363 M0R378 163 aa19.47■□□□□ 0.71
CCM2-219ENST00000544363 IGKV2-24A0A0C4DH68 120 aa19.46■□□□□ 0.71
CCM2-219ENST00000544363 FAM168BA1KXE4 195 aa19.45■□□□□ 0.7
CCM2-219ENST00000544363 RPL28P46779 137 aaKnown RBP19.45■□□□□ 0.7
CCM2-219ENST00000544363 SMIM11BQ8TCY0 68 aa19.45■□□□□ 0.7
CCM2-219ENST00000544363 IGLV6-57P01721 117 aa19.44■□□□□ 0.7
CCM2-219ENST00000544363 SCGB1C2P0DMR2 95 aa19.44■□□□□ 0.7
CCM2-219ENST00000544363 LYRM7Q5U5X0 104 aa19.44■□□□□ 0.7
CCM2-219ENST00000544363 HECTD4Q9Y4D8 3996 aa19.44■□□□□ 0.7
CCM2-219ENST00000544363 IGLV5-37A0A075B6J1 123 aa19.43■□□□□ 0.7
CCM2-219ENST00000544363 FUSP35637 526 aaKnown RBP eCLIP19.43■□□□□ 0.7
CCM2-219ENST00000544363 NKAPP1Q8N9T2 125 aa19.43■□□□□ 0.7
CCM2-219ENST00000544363 SPCS1Q9Y6A9 102 aa19.43■□□□□ 0.7
CCM2-219ENST00000544363 IGLV5-52A0A0A0MRZ9 124 aa19.42■□□□□ 0.7
CCM2-219ENST00000544363 COX6CP09669 75 aa19.41■□□□□ 0.7
CCM2-219ENST00000544363 KRTAP7-1Q8IUC3 87 aa19.41■□□□□ 0.7
CCM2-219ENST00000544363 TRBV10-3A0A0K0K1G6 114 aa19.4■□□□□ 0.7
CCM2-219ENST00000544363 GAGE10A6NGK3 116 aa19.4■□□□□ 0.7
CCM2-219ENST00000544363 CHTF8P0CG12 524 aa19.4■□□□□ 0.7
CCM2-219ENST00000544363 K7EP34 96 aa19.39■□□□□ 0.69
CCM2-219ENST00000544363 FAM19A5Q7Z5A7 132 aaPredicted RBP19.39■□□□□ 0.69
CCM2-219ENST00000544363 LINC00474Q9P2X8 69 aa19.38■□□□□ 0.69
CCM2-219ENST00000544363 GTF2H5Q6ZYL4 71 aa19.36■□□□□ 0.69
CCM2-219ENST00000544363 C7orf33Q8WU49 177 aa19.36■□□□□ 0.69
CCM2-219ENST00000544363 C22orf24Q9Y442 160 aa19.36■□□□□ 0.69
CCM2-219ENST00000544363 A0A1W2PNN7 141 aa19.34■□□□□ 0.69
CCM2-219ENST00000544363 TRBV20-1A0A075B6N2 111 aa19.33■□□□□ 0.69
CCM2-219ENST00000544363 TCL1BO95988 128 aa19.33■□□□□ 0.69
CCM2-219ENST00000544363 FAT2Q9NYQ8 4349 aa19.33■□□□□ 0.68
CCM2-219ENST00000544363 UBE2V1Q13404 147 aa19.33■□□□□ 0.68
CCM2-219ENST00000544363 KRTAP10-2P60368 255 aa19.32■□□□□ 0.68
CCM2-219ENST00000544363 TRAV23DV6A0A075B6W5 121 aa19.3■□□□□ 0.68
CCM2-219ENST00000544363 MRPL55Q7Z7F7 128 aaKnown RBP19.3■□□□□ 0.68
CCM2-219ENST00000544363 DNAH11Q96DT5 4516 aa19.3■□□□□ 0.68
CCM2-219ENST00000544363 PANO1I0J062 215 aa19.29■□□□□ 0.68
CCM2-219ENST00000544363 CBY1Q9Y3M2 126 aa19.29■□□□□ 0.68
CCM2-219ENST00000544363 CLEC2BQ92478 149 aa19.29■□□□□ 0.68
CCM2-219ENST00000544363 LINC00167Q96N53 147 aa19.29■□□□□ 0.68
CCM2-219ENST00000544363 SPACA4Q8TDM5 124 aa19.28■□□□□ 0.68
CCM2-219ENST00000544363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP19.28■□□□□ 0.68
CCM2-219ENST00000544363 M0QXV9 152 aa19.27■□□□□ 0.68
CCM2-219ENST00000544363 C6orf99Q4VX62 202 aa19.27■□□□□ 0.68
CCM2-219ENST00000544363 H0YGX0 51 aa19.26■□□□□ 0.67
CCM2-219ENST00000544363 LINC00336Q6ZUF6 198 aa19.26■□□□□ 0.67
CCM2-219ENST00000544363 H3BMG7 143 aa19.25■□□□□ 0.67
CCM2-219ENST00000544363 ATXN8Q156A1 80 aa19.25■□□□□ 0.67
CCM2-219ENST00000544363 DPH3Q96FX2 82 aa19.25■□□□□ 0.67
CCM2-219ENST00000544363 IGLV1-50A0A075B6I6 118 aa19.24■□□□□ 0.67
CCM2-219ENST00000544363 KCNQ1DNQ9H478 68 aa19.24■□□□□ 0.67
CCM2-219ENST00000544363 RPL37AP8A6NKH3 93 aa19.23■□□□□ 0.67
CCM2-219ENST00000544363 ZNF73O43830 326 aaPredicted RBP19.23■□□□□ 0.67
CCM2-219ENST00000544363 LST1O00453 97 aa19.22■□□□□ 0.67
CCM2-219ENST00000544363 DIRC1Q969H9 104 aa19.22■□□□□ 0.67
CCM2-219ENST00000544363 RYR2Q92736 4967 aa19.21■□□□□ 0.67
CCM2-219ENST00000544363 FAM218AQ96MZ4 157 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms