RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TOMM6Q96B49 74 aa7.14□□□□□ -1.27
GABPB1-206ENST00000543881 CDKN2A-AS1Q9UH64 79 aa7.14□□□□□ -1.27
GABPB1-206ENST00000543881 TRAV9-1A0A075B6T8 112 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 PRSS2P07478 247 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 UBE2BP63146 152 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 C6orf226Q5I0X4 101 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 Q8IZM0 81 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 TIMM17AQ99595 171 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
GABPB1-206ENST00000543881 CKS1BP61024 79 aa7.12□□□□□ -1.27
GABPB1-206ENST00000543881 HERVK_113P63121 156 aa7.12□□□□□ -1.27
GABPB1-206ENST00000543881 PRR4Q16378 134 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 BATFQ16520 125 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 XAGE1AQ9HD64 81 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 SEC11AP67812 179 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 ERASQ7Z444 233 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 GEMIN7Q9H840 131 aaKnown RBP7.11□□□□□ -1.27
GABPB1-206ENST00000543881 C22orf24Q9Y442 160 aa7.11□□□□□ -1.27
GABPB1-206ENST00000543881 F8VRH5 84 aa7.1□□□□□ -1.27
GABPB1-206ENST00000543881 SCGB3A1Q96QR1 104 aa7.1□□□□□ -1.27
GABPB1-206ENST00000543881 LINC01546A6NGU7 62 aa7.09□□□□□ -1.27
GABPB1-206ENST00000543881 SMIM1B2RUZ4 78 aa7.09□□□□□ -1.27
GABPB1-206ENST00000543881 VAMP3Q15836 100 aa7.09□□□□□ -1.27
GABPB1-206ENST00000543881 PMCHL1Q16048 86 aa7.09□□□□□ -1.27
GABPB1-206ENST00000543881 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.27
GABPB1-206ENST00000543881 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
GABPB1-206ENST00000543881 SPATA45Q537H7 98 aa7.08□□□□□ -1.28
GABPB1-206ENST00000543881 GNB1LQ9BYB4 327 aa7.08□□□□□ -1.28
GABPB1-206ENST00000543881 IGLV5-45A0A087WSX0 123 aa7.07□□□□□ -1.28
GABPB1-206ENST00000543881 TINCRA0A1B0GVN0 87 aa7.07□□□□□ -1.28
GABPB1-206ENST00000543881 ZNF861PO60384 105 aa7.07□□□□□ -1.28
GABPB1-206ENST00000543881 TAX1BP3O14907 124 aa7.06□□□□□ -1.28
GABPB1-206ENST00000543881 CXCL5P42830 114 aa7.06□□□□□ -1.28
GABPB1-206ENST00000543881 TSPAN13O95857 204 aa7.05□□□□□ -1.28
GABPB1-206ENST00000543881 COX19Q49B96 90 aa7.05□□□□□ -1.28
GABPB1-206ENST00000543881 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
GABPB1-206ENST00000543881 COX7B2Q8TF08 81 aa7.05□□□□□ -1.28
GABPB1-206ENST00000543881 TP73-AS1Q9UF72 201 aa7.05□□□□□ -1.28
GABPB1-206ENST00000543881 NUPR1O60356 82 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 SPINK8P0C7L1 97 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 SIGMAR1Q99720 223 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
GABPB1-206ENST00000543881 TRAPPC1Q9Y5R8 145 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 PMVKQ15126 192 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 LINC00167Q96N53 147 aa7.04□□□□□ -1.28
GABPB1-206ENST00000543881 LINC01549A6NIU2 74 aa7.03□□□□□ -1.28
GABPB1-206ENST00000543881 RPL37AP8A6NKH3 93 aa7.03□□□□□ -1.28
GABPB1-206ENST00000543881 LINC00310P59036 64 aa7.03□□□□□ -1.28
GABPB1-206ENST00000543881 FA2HQ7L5A8 372 aa7.03□□□□□ -1.28
GABPB1-206ENST00000543881 A0A096LNJ9 63 aa7.02□□□□□ -1.29
GABPB1-206ENST00000543881 BCE1O60756 84 aa7.02□□□□□ -1.29
GABPB1-206ENST00000543881 RPL13AP40429 203 aaKnown RBP7.02□□□□□ -1.29
GABPB1-206ENST00000543881 HINT1P49773 126 aaPredicted RBP7.02□□□□□ -1.29
GABPB1-206ENST00000543881 GAGE10A6NGK3 116 aa7.01□□□□□ -1.29
GABPB1-206ENST00000543881 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
GABPB1-206ENST00000543881 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
GABPB1-206ENST00000543881 A0A087X002 238 aa7□□□□□ -1.29
GABPB1-206ENST00000543881 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
GABPB1-206ENST00000543881 SERF1AO75920 110 aa6.99□□□□□ -1.29
GABPB1-206ENST00000543881 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
GABPB1-206ENST00000543881 RPL28P46779 137 aaKnown RBP6.99□□□□□ -1.29
GABPB1-206ENST00000543881 BVES-AS1Q5T3Y7 98 aa6.99□□□□□ -1.29
GABPB1-206ENST00000543881 PMCHL2Q9BQD1 86 aa6.99□□□□□ -1.29
GABPB1-206ENST00000543881 J3QR89 54 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 ZNF22P17026 224 aaPredicted RBP6.98□□□□□ -1.29
GABPB1-206ENST00000543881 HSD52Q0P140 79 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 C18orf32Q8TCD1 76 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 H3BRM9 83 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 ATP5LO75964 103 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 PFN2P35080 140 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 ANAPC11Q9NYG5 84 aa6.98□□□□□ -1.29
GABPB1-206ENST00000543881 K7EP34 96 aa6.97□□□□□ -1.29
GABPB1-206ENST00000543881 C3orf79P0CE67 100 aa6.96□□□□□ -1.3
GABPB1-206ENST00000543881 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
GABPB1-206ENST00000543881 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 A6NDN8 102 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 CRYGAP11844 174 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 VPREB1P12018 145 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 KRTDAPP60985 99 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 Q6ZVH6 145 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 BAGE3Q86Y29 109 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 Q8NDZ9 215 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 SND1-IT1Q9HBX3 110 aa6.95□□□□□ -1.3
GABPB1-206ENST00000543881 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
GABPB1-206ENST00000543881 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
GABPB1-206ENST00000543881 HBDP02042 147 aa6.94□□□□□ -1.3
GABPB1-206ENST00000543881 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
GABPB1-206ENST00000543881 TYMSOSQ8TAI1 123 aa6.94□□□□□ -1.3
GABPB1-206ENST00000543881 ZNF625Q96I27 306 aaPredicted RBP6.94□□□□□ -1.3
GABPB1-206ENST00000543881 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
GABPB1-206ENST00000543881 UBE2AP49459 152 aa6.93□□□□□ -1.3
GABPB1-206ENST00000543881 SLC25A34Q6PIV7 304 aa6.92□□□□□ -1.3
GABPB1-206ENST00000543881 PRLHP81277 87 aa6.92□□□□□ -1.3
GABPB1-206ENST00000543881 COX17Q14061 63 aa6.92□□□□□ -1.3
GABPB1-206ENST00000543881 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms