RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TRBV7-4A0A0J9YYF1 115 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 PLAC8L1A1L4L8 177 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 CXCL6P80162 114 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 ESRGQ1W209 222 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 PRR15Q8IV56 129 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 GCN1Q92616 2671 aaKnown RBP8.66□□□□□ -1.02
SMG8-202ENST00000543872 FLNCQ14315 2725 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 CCDC168Q8NDH2 2452 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 GYPEP15421 78 aa8.66□□□□□ -1.02
SMG8-202ENST00000543872 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.02
SMG8-202ENST00000543872 C16orf74Q96GX8 76 aa8.65□□□□□ -1.03
SMG8-202ENST00000543872 CACNA1AO00555 2505 aa8.65□□□□□ -1.03
SMG8-202ENST00000543872 MYO18BQ8IUG5 2567 aa8.64□□□□□ -1.03
SMG8-202ENST00000543872 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.63□□□□□ -1.03
SMG8-202ENST00000543872 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 ABCA12Q86UK0 2595 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 PKD1L2Q7Z442 2459 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
SMG8-202ENST00000543872 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMG8-202ENST00000543872 KIAA0087Q14695 138 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 Q6ZRU5 148 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 LINC01356Q8N9X3 169 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 LINC01006Q8NI28 216 aa8.63□□□□□ -1.03
SMG8-202ENST00000543872 CHCHD10Q8WYQ3 142 aaPredicted RBP8.62□□□□□ -1.03
SMG8-202ENST00000543872 ANGP03950 147 aaKnown RBP8.62□□□□□ -1.03
SMG8-202ENST00000543872 CD164Q04900 197 aa8.62□□□□□ -1.03
SMG8-202ENST00000543872 PDE6GP18545 87 aa8.61□□□□□ -1.03
SMG8-202ENST00000543872 Q6YL49 198 aa8.61□□□□□ -1.03
SMG8-202ENST00000543872 BBC3Q96PG8 261 aaPredicted RBP8.61□□□□□ -1.03
SMG8-202ENST00000543872 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
SMG8-202ENST00000543872 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
SMG8-202ENST00000543872 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
SMG8-202ENST00000543872 PRYO14603 147 aa8.6□□□□□ -1.03
SMG8-202ENST00000543872 COX17Q14061 63 aa8.6□□□□□ -1.03
SMG8-202ENST00000543872 PSPHP1O15172 72 aa8.59□□□□□ -1.03
SMG8-202ENST00000543872 CD164L2Q6UWJ8 174 aa8.59□□□□□ -1.04
SMG8-202ENST00000543872 C9orf66Q5T8R8 295 aa8.58□□□□□ -1.04
SMG8-202ENST00000543872 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
SMG8-202ENST00000543872 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
SMG8-202ENST00000543872 DIRC1Q969H9 104 aa8.57□□□□□ -1.04
SMG8-202ENST00000543872 C3orf84H3BNL1 204 aa8.57□□□□□ -1.04
SMG8-202ENST00000543872 CCL24O00175 119 aa8.57□□□□□ -1.04
SMG8-202ENST00000543872 PRB2P02812 416 aaPredicted RBP8.57□□□□□ -1.04
SMG8-202ENST00000543872 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
SMG8-202ENST00000543872 Q6ZTC4 211 aa8.56□□□□□ -1.04
SMG8-202ENST00000543872 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
SMG8-202ENST00000543872 REG3AQ06141 175 aa8.56□□□□□ -1.04
SMG8-202ENST00000543872 A0A1B0GUV1 79 aa8.56□□□□□ -1.04
SMG8-202ENST00000543872 A8MU10 97 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 CYSRT1A8MQ03 144 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 COX7BP24311 80 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 FAM30AQ9NZY2 134 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 MTORP42345 2549 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 IGLV6-57P01721 117 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 Q6ZRP5 223 aa8.55□□□□□ -1.04
SMG8-202ENST00000543872 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
SMG8-202ENST00000543872 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
SMG8-202ENST00000543872 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
SMG8-202ENST00000543872 IGKV4-1P06312 121 aa8.53□□□□□ -1.04
SMG8-202ENST00000543872 ZNF73O43830 326 aaPredicted RBP8.53□□□□□ -1.04
SMG8-202ENST00000543872 PRR4Q16378 134 aa8.53□□□□□ -1.04
SMG8-202ENST00000543872 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
SMG8-202ENST00000543872 DEFB4AO15263 64 aa8.52□□□□□ -1.05
SMG8-202ENST00000543872 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
SMG8-202ENST00000543872 CSNK1G2-AS1Q8NCQ2 148 aa8.51□□□□□ -1.05
SMG8-202ENST00000543872 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
SMG8-202ENST00000543872 PRO0255Q9UI72 69 aa8.5□□□□□ -1.05
SMG8-202ENST00000543872 hDV103S1A0JD37 113 aa8.49□□□□□ -1.05
SMG8-202ENST00000543872 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
SMG8-202ENST00000543872 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
SMG8-202ENST00000543872 HIVEP2P31629 2446 aa8.49□□□□□ -1.05
SMG8-202ENST00000543872 H3BQ85 93 aa8.48□□□□□ -1.05
SMG8-202ENST00000543872 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
SMG8-202ENST00000543872 DSCR9P59020 149 aa8.48□□□□□ -1.05
SMG8-202ENST00000543872 Q1T7F1 81 aa8.47□□□□□ -1.05
SMG8-202ENST00000543872 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.05
SMG8-202ENST00000543872 HTN3P15516 51 aa8.46□□□□□ -1.05
SMG8-202ENST00000543872 F8P00451 2351 aa8.46□□□□□ -1.05
SMG8-202ENST00000543872 IGHV4-31P0DP07 118 aa8.46□□□□□ -1.05
SMG8-202ENST00000543872 C1orf64Q8NEQ6 169 aa8.46□□□□□ -1.05
SMG8-202ENST00000543872 ACANP16112 2415 aa8.46□□□□□ -1.06
SMG8-202ENST00000543872 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
SMG8-202ENST00000543872 ELOF1P60002 83 aaKnown RBP8.45□□□□□ -1.06
SMG8-202ENST00000543872 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
SMG8-202ENST00000543872 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
SMG8-202ENST00000543872 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
SMG8-202ENST00000543872 A8MUN3 132 aa8.44□□□□□ -1.06
SMG8-202ENST00000543872 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
SMG8-202ENST00000543872 FSHBP01225 129 aa8.44□□□□□ -1.06
SMG8-202ENST00000543872 IGHV4-30-4P0DP06 118 aa8.44□□□□□ -1.06
SMG8-202ENST00000543872 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
SMG8-202ENST00000543872 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
SMG8-202ENST00000543872 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
SMG8-202ENST00000543872 KTN1-AS1Q86SY8 53 aa8.4□□□□□ -1.06
SMG8-202ENST00000543872 USP24Q9UPU5 2620 aa8.4□□□□□ -1.06
SMG8-202ENST00000543872 IGLV1-51P01701 117 aa8.39□□□□□ -1.07
SMG8-202ENST00000543872 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms