RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 IGHV4-30-4P0DP06 118 aa9.35□□□□□ -0.91
VPS33A-208ENST00000543633 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
VPS33A-208ENST00000543633 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
VPS33A-208ENST00000543633 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
VPS33A-208ENST00000543633 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
VPS33A-208ENST00000543633 NIPBLQ6KC79 2804 aaeCLIP9.33□□□□□ -0.92
VPS33A-208ENST00000543633 A0A096LPF7 62 aa9.33□□□□□ -0.92
VPS33A-208ENST00000543633 PDE6GP18545 87 aa9.33□□□□□ -0.92
VPS33A-208ENST00000543633 SPAG11BQ08648 103 aa9.33□□□□□ -0.92
VPS33A-208ENST00000543633 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
VPS33A-208ENST00000543633 Q6ZQT0 140 aa9.33□□□□□ -0.92
VPS33A-208ENST00000543633 IGLV6-57P01721 117 aa9.32□□□□□ -0.92
VPS33A-208ENST00000543633 APOC4P55056 127 aa9.32□□□□□ -0.92
VPS33A-208ENST00000543633 DAD1P61803 113 aa9.32□□□□□ -0.92
VPS33A-208ENST00000543633 RBM3P98179 157 aaKnown RBP9.32□□□□□ -0.92
VPS33A-208ENST00000543633 LELP1Q5T871 98 aa9.32□□□□□ -0.92
VPS33A-208ENST00000543633 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
VPS33A-208ENST00000543633 Q8NDZ9 215 aa9.31□□□□□ -0.92
VPS33A-208ENST00000543633 IGLV10-54A0A075B6I4 117 aa9.31□□□□□ -0.92
VPS33A-208ENST00000543633 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
VPS33A-208ENST00000543633 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
VPS33A-208ENST00000543633 MIFP14174 115 aa9.3□□□□□ -0.92
VPS33A-208ENST00000543633 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
VPS33A-208ENST00000543633 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
VPS33A-208ENST00000543633 GHRHP01286 108 aa9.29□□□□□ -0.92
VPS33A-208ENST00000543633 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
VPS33A-208ENST00000543633 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
VPS33A-208ENST00000543633 TRBV7-6A0A0J9YX20 115 aa9.27□□□□□ -0.93
VPS33A-208ENST00000543633 DEFB135Q30KP9 77 aa9.27□□□□□ -0.93
VPS33A-208ENST00000543633 C10orf25Q5T742 122 aa9.27□□□□□ -0.93
VPS33A-208ENST00000543633 ENHOQ6UWT2 76 aa9.27□□□□□ -0.93
VPS33A-208ENST00000543633 Q8N3U1 123 aa9.27□□□□□ -0.93
VPS33A-208ENST00000543633 Q8NAQ8 132 aa9.27□□□□□ -0.93
VPS33A-208ENST00000543633 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.26□□□□□ -0.93
VPS33A-208ENST00000543633 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
VPS33A-208ENST00000543633 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
VPS33A-208ENST00000543633 DPH3Q96FX2 82 aa9.26□□□□□ -0.93
VPS33A-208ENST00000543633 DSCR8Q96T75 97 aa9.26□□□□□ -0.93
VPS33A-208ENST00000543633 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
VPS33A-208ENST00000543633 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
VPS33A-208ENST00000543633 TRAV23DV6A0A075B6W5 121 aa9.24□□□□□ -0.93
VPS33A-208ENST00000543633 CXCL6P80162 114 aa9.24□□□□□ -0.93
VPS33A-208ENST00000543633 TENM1Q9UKZ4 2725 aa9.24□□□□□ -0.93
VPS33A-208ENST00000543633 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
VPS33A-208ENST00000543633 CELA1Q9UNI1 258 aa9.24□□□□□ -0.93
VPS33A-208ENST00000543633 Q6ZQY7 126 aa9.23□□□□□ -0.93
VPS33A-208ENST00000543633 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
VPS33A-208ENST00000543633 Q6ZVQ6 151 aa9.22□□□□□ -0.93
VPS33A-208ENST00000543633 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
VPS33A-208ENST00000543633 TEP1Q99973 2627 aaKnown RBP9.22□□□□□ -0.93
VPS33A-208ENST00000543633 LINC01547P58512 204 aaPredicted RBP9.22□□□□□ -0.93
VPS33A-208ENST00000543633 WFDC9Q8NEX5 89 aa9.22□□□□□ -0.93
VPS33A-208ENST00000543633 DEFB4AO15263 64 aa9.21□□□□□ -0.93
VPS33A-208ENST00000543633 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.93
VPS33A-208ENST00000543633 KLK12Q9UKR0 248 aa9.21□□□□□ -0.93
VPS33A-208ENST00000543633 TRBV7-4A0A0J9YYF1 115 aa9.21□□□□□ -0.94
VPS33A-208ENST00000543633 ELOF1P60002 83 aaKnown RBP9.21□□□□□ -0.94
VPS33A-208ENST00000543633 COX7BP24311 80 aa9.2□□□□□ -0.94
VPS33A-208ENST00000543633 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-208ENST00000543633 VWFP04275 2813 aa9.19□□□□□ -0.94
VPS33A-208ENST00000543633 H3BNG1 76 aa9.18□□□□□ -0.94
VPS33A-208ENST00000543633 EGFEM1PQ0D2K5 195 aa9.18□□□□□ -0.94
VPS33A-208ENST00000543633 FBN1P35555 2871 aaKnown RBP9.18□□□□□ -0.94
VPS33A-208ENST00000543633 ATRQ13535 2644 aa9.17□□□□□ -0.94
VPS33A-208ENST00000543633 MAST4O15021 2626 aa9.17□□□□□ -0.94
VPS33A-208ENST00000543633 F8WDY8 70 aa9.17□□□□□ -0.94
VPS33A-208ENST00000543633 VPREB1P12018 145 aa9.17□□□□□ -0.94
VPS33A-208ENST00000543633 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
VPS33A-208ENST00000543633 M0R378 163 aa9.16□□□□□ -0.94
VPS33A-208ENST00000543633 SPATA3Q8NHX4 192 aa9.16□□□□□ -0.94
VPS33A-208ENST00000543633 M0R2N4 97 aa9.15□□□□□ -0.94
VPS33A-208ENST00000543633 WIPF1O43516 503 aa9.15□□□□□ -0.94
VPS33A-208ENST00000543633 HTN3P15516 51 aa9.15□□□□□ -0.94
VPS33A-208ENST00000543633 HAMPP81172 84 aa9.15□□□□□ -0.94
VPS33A-208ENST00000543633 KLKP1Q107X0 134 aa9.15□□□□□ -0.94
VPS33A-208ENST00000543633 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
VPS33A-208ENST00000543633 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
VPS33A-208ENST00000543633 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
VPS33A-208ENST00000543633 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
VPS33A-208ENST00000543633 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
VPS33A-208ENST00000543633 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
VPS33A-208ENST00000543633 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
VPS33A-208ENST00000543633 OXTP01178 125 aa9.12□□□□□ -0.95
VPS33A-208ENST00000543633 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
VPS33A-208ENST00000543633 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
VPS33A-208ENST00000543633 H7BZZ5 65 aa9.1□□□□□ -0.95
VPS33A-208ENST00000543633 NDUFC1O43677 76 aa9.09□□□□□ -0.95
VPS33A-208ENST00000543633 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
VPS33A-208ENST00000543633 Q6ZRU5 148 aa9.09□□□□□ -0.95
VPS33A-208ENST00000543633 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
VPS33A-208ENST00000543633 TRRAPQ9Y4A5 3859 aa9.08□□□□□ -0.96
VPS33A-208ENST00000543633 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
VPS33A-208ENST00000543633 ERC2-IT1O76042 136 aa9.07□□□□□ -0.96
VPS33A-208ENST00000543633 HIGD2BQ4VC39 106 aa9.07□□□□□ -0.96
VPS33A-208ENST00000543633 WFDC10BQ8IUB3 73 aa9.07□□□□□ -0.96
VPS33A-208ENST00000543633 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
VPS33A-208ENST00000543633 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
VPS33A-208ENST00000543633 Q5XG85 94 aa9.05□□□□□ -0.96
VPS33A-208ENST00000543633 A0A1B0GW54 56 aa9.05□□□□□ -0.96
VPS33A-208ENST00000543633 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms