RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 BCE1O60756 84 aa13.51□□□□□ -0.25
SUDS3-204ENST00000543473 IL17DQ8TAD2 202 aa13.51□□□□□ -0.25
SUDS3-204ENST00000543473 SPATA3Q8NHX4 192 aa13.51□□□□□ -0.25
SUDS3-204ENST00000543473 PRR15LQ9BU68 103 aa13.49□□□□□ -0.25
SUDS3-204ENST00000543473 CENPEQ02224 2701 aa13.48□□□□□ -0.25
SUDS3-204ENST00000543473 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
SUDS3-204ENST00000543473 TRAV10A0A0B4J240 114 aa13.47□□□□□ -0.25
SUDS3-204ENST00000543473 CASC2Q6XLA1 102 aa13.47□□□□□ -0.25
SUDS3-204ENST00000543473 C4orf48Q5BLP8 95 aa13.47□□□□□ -0.25
SUDS3-204ENST00000543473 ZNF292O60281 2723 aa13.46□□□□□ -0.25
SUDS3-204ENST00000543473 EIF4EBP3O60516 100 aaPredicted RBP13.44□□□□□ -0.26
SUDS3-204ENST00000543473 SPINK6Q6UWN8 80 aa13.44□□□□□ -0.26
SUDS3-204ENST00000543473 TRIOO75962 3097 aa13.43□□□□□ -0.26
SUDS3-204ENST00000543473 Q6ZQT0 140 aa13.42□□□□□ -0.26
SUDS3-204ENST00000543473 RETNQ9HD89 108 aa13.42□□□□□ -0.26
SUDS3-204ENST00000543473 A0A087WSZ3 146 aa13.41□□□□□ -0.26
SUDS3-204ENST00000543473 Q6ZRU5 148 aa13.41□□□□□ -0.26
SUDS3-204ENST00000543473 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
SUDS3-204ENST00000543473 REG3GQ6UW15 175 aa13.4□□□□□ -0.26
SUDS3-204ENST00000543473 DEFB116Q30KQ4 102 aa13.39□□□□□ -0.27
SUDS3-204ENST00000543473 MGAQ8IWI9 3026 aa13.39□□□□□ -0.27
SUDS3-204ENST00000543473 COL27A1Q8IZC6 1860 aaPredicted RBP13.39□□□□□ -0.27
SUDS3-204ENST00000543473 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
SUDS3-204ENST00000543473 CDH23Q9H251 3354 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 HCG22E2RYF7 251 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 IGLV9-49A0A0B4J1Y8 123 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 SMIM29Q86T20 159 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 WDFY4Q6ZS81 3184 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 PLAC8L1A1L4L8 177 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 LYPD5Q6UWN5 251 aa13.38□□□□□ -0.27
SUDS3-204ENST00000543473 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
SUDS3-204ENST00000543473 LOC110117498A0A087WWA1 95 aa13.36□□□□□ -0.27
SUDS3-204ENST00000543473 H0Y9P7 68 aa13.36□□□□□ -0.27
SUDS3-204ENST00000543473 Q6ZTC4 211 aa13.35□□□□□ -0.27
SUDS3-204ENST00000543473 TM2D3Q9BRN9 247 aa13.35□□□□□ -0.27
SUDS3-204ENST00000543473 KIAA0087Q14695 138 aa13.34□□□□□ -0.27
SUDS3-204ENST00000543473 F8WDY8 70 aa13.33□□□□□ -0.28
SUDS3-204ENST00000543473 PCOTHQ58A44 107 aa13.33□□□□□ -0.28
SUDS3-204ENST00000543473 hDV103S1A0JD37 113 aa13.32□□□□□ -0.28
SUDS3-204ENST00000543473 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
SUDS3-204ENST00000543473 ZNF706Q9Y5V0 76 aaPredicted RBP13.31□□□□□ -0.28
SUDS3-204ENST00000543473 Q9BRP9 147 aa13.31□□□□□ -0.28
SUDS3-204ENST00000543473 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
SUDS3-204ENST00000543473 FSHBP01225 129 aa13.28□□□□□ -0.28
SUDS3-204ENST00000543473 ELOF1P60002 83 aaKnown RBP13.28□□□□□ -0.28
SUDS3-204ENST00000543473 HELZ2Q9BYK8 2649 aaKnown RBP13.28□□□□□ -0.28
SUDS3-204ENST00000543473 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
SUDS3-204ENST00000543473 C7orf33Q8WU49 177 aa13.26□□□□□ -0.29
SUDS3-204ENST00000543473 M0R2N4 97 aa13.25□□□□□ -0.29
SUDS3-204ENST00000543473 FLNAP21333 2647 aaKnown RBP13.25□□□□□ -0.29
SUDS3-204ENST00000543473 LIMD2Q9BT23 127 aa13.23□□□□□ -0.29
SUDS3-204ENST00000543473 LINC00474Q9P2X8 69 aa13.23□□□□□ -0.29
SUDS3-204ENST00000543473 IGHV6-1A0A0B4J1U7 121 aa13.23□□□□□ -0.29
SUDS3-204ENST00000543473 C1orf64Q8NEQ6 169 aa13.23□□□□□ -0.29
SUDS3-204ENST00000543473 C22orf24Q9Y442 160 aa13.22□□□□□ -0.29
SUDS3-204ENST00000543473 PRLHP81277 87 aa13.22□□□□□ -0.29
SUDS3-204ENST00000543473 USP24Q9UPU5 2620 aa13.21□□□□□ -0.3
SUDS3-204ENST00000543473 A0A1B0GW54 56 aa13.21□□□□□ -0.3
SUDS3-204ENST00000543473 K7ERS5 55 aa13.21□□□□□ -0.3
SUDS3-204ENST00000543473 ITPR3Q14573 2671 aa13.2□□□□□ -0.3
SUDS3-204ENST00000543473 ZNF575Q86XF7 245 aa13.19□□□□□ -0.3
SUDS3-204ENST00000543473 MGAM2Q2M2H8 2515 aa13.17□□□□□ -0.3
SUDS3-204ENST00000543473 Q8NBF4 154 aa13.17□□□□□ -0.3
SUDS3-204ENST00000543473 X6R8D5 127 aa13.17□□□□□ -0.3
SUDS3-204ENST00000543473 LINC00167Q96N53 147 aa13.16□□□□□ -0.3
SUDS3-204ENST00000543473 A0A096LNT2 108 aa13.15□□□□□ -0.3
SUDS3-204ENST00000543473 LY6G6CO95867 125 aa13.15□□□□□ -0.3
SUDS3-204ENST00000543473 KRTAP24-1Q3LI83 254 aa13.15□□□□□ -0.3
SUDS3-204ENST00000543473 KLKP1Q107X0 134 aa13.15□□□□□ -0.3
SUDS3-204ENST00000543473 DSPP15924 2871 aaKnown RBP13.14□□□□□ -0.31
SUDS3-204ENST00000543473 IGLV6-57P01721 117 aa13.14□□□□□ -0.31
SUDS3-204ENST00000543473 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
SUDS3-204ENST00000543473 ATRQ13535 2644 aa13.13□□□□□ -0.31
SUDS3-204ENST00000543473 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
SUDS3-204ENST00000543473 C9orf129Q5T035 196 aaKnown RBP13.12□□□□□ -0.31
SUDS3-204ENST00000543473 ERC2-IT1O76042 136 aa13.11□□□□□ -0.31
SUDS3-204ENST00000543473 LINC01556Q5JQF7 62 aa13.1□□□□□ -0.31
SUDS3-204ENST00000543473 Q6ZRX8 168 aa13.09□□□□□ -0.31
SUDS3-204ENST00000543473 LINC00336Q6ZUF6 198 aa13.09□□□□□ -0.31
SUDS3-204ENST00000543473 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
SUDS3-204ENST00000543473 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
SUDS3-204ENST00000543473 H7BZZ5 65 aa13.09□□□□□ -0.31
SUDS3-204ENST00000543473 NUPR2A6NF83 97 aa13.09□□□□□ -0.31
SUDS3-204ENST00000543473 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.32
SUDS3-204ENST00000543473 LINC00476Q8WZB0 136 aa13.06□□□□□ -0.32
SUDS3-204ENST00000543473 VPREB1P12018 145 aa13.06□□□□□ -0.32
SUDS3-204ENST00000543473 CIRBP-AS1Q8TBR5 109 aa13.06□□□□□ -0.32
SUDS3-204ENST00000543473 ST20-AS1Q8NBB2 130 aa13.05□□□□□ -0.32
SUDS3-204ENST00000543473 H3BPC8 53 aa13.02□□□□□ -0.32
SUDS3-204ENST00000543473 MAST4O15021 2626 aa13.02□□□□□ -0.33
SUDS3-204ENST00000543473 TRBV7-4A0A0J9YYF1 115 aa13□□□□□ -0.33
SUDS3-204ENST00000543473 SPAG11AQ6PDA7 123 aa13□□□□□ -0.33
SUDS3-204ENST00000543473 TP53AIP1Q9HCN2 124 aa12.99□□□□□ -0.33
SUDS3-204ENST00000543473 Q6ZRP5 223 aa12.99□□□□□ -0.33
SUDS3-204ENST00000543473 RETNLBQ9BQ08 111 aa12.99□□□□□ -0.33
SUDS3-204ENST00000543473 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
SUDS3-204ENST00000543473 MAP1AP78559 2803 aaPredicted RBP12.97□□□□□ -0.33
SUDS3-204ENST00000543473 TRAV22A0A0B4J277 110 aa12.97□□□□□ -0.33
SUDS3-204ENST00000543473 H3BNG1 76 aa12.97□□□□□ -0.33
SUDS3-204ENST00000543473 K7EQZ3 153 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms