RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 UBE2BP63146 152 aa11.34□□□□□ -0.59
COPS7A-216ENST00000543170 MRPL55Q7Z7F7 128 aaKnown RBP11.34□□□□□ -0.59
COPS7A-216ENST00000543170 LRP1Q07954 4544 aaKnown RBP11.34□□□□□ -0.59
COPS7A-216ENST00000543170 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
COPS7A-216ENST00000543170 LINC00158P58513 81 aa11.33□□□□□ -0.6
COPS7A-216ENST00000543170 MEIG1Q5JSS6 88 aa11.33□□□□□ -0.6
COPS7A-216ENST00000543170 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
COPS7A-216ENST00000543170 C20orf202A1L168 122 aa11.32□□□□□ -0.6
COPS7A-216ENST00000543170 C1orf137Q5JT78 98 aa11.32□□□□□ -0.6
COPS7A-216ENST00000543170 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
COPS7A-216ENST00000543170 OXTP01178 125 aa11.31□□□□□ -0.6
COPS7A-216ENST00000543170 S100A6P06703 90 aa11.31□□□□□ -0.6
COPS7A-216ENST00000543170 AKR1D1P51857 326 aa11.31□□□□□ -0.6
COPS7A-216ENST00000543170 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
COPS7A-216ENST00000543170 SPINK6Q6UWN8 80 aa11.31□□□□□ -0.6
COPS7A-216ENST00000543170 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
COPS7A-216ENST00000543170 VPREB1P12018 145 aa11.3□□□□□ -0.6
COPS7A-216ENST00000543170 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
COPS7A-216ENST00000543170 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
COPS7A-216ENST00000543170 DMBT1Q9UGM3 2413 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-216ENST00000543170 S100A2P29034 98 aa11.29□□□□□ -0.6
COPS7A-216ENST00000543170 IGLV7-43P04211 117 aa11.28□□□□□ -0.6
COPS7A-216ENST00000543170 HIST1H2BLQ99880 126 aa11.28□□□□□ -0.6
COPS7A-216ENST00000543170 A0A0U1RRA0 63 aa11.27□□□□□ -0.61
COPS7A-216ENST00000543170 MIR7-3HGQ8N6C7 128 aa11.27□□□□□ -0.61
COPS7A-216ENST00000543170 LINC00167Q96N53 147 aa11.27□□□□□ -0.61
COPS7A-216ENST00000543170 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
COPS7A-216ENST00000543170 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
COPS7A-216ENST00000543170 Q8NDZ9 215 aa11.24□□□□□ -0.61
COPS7A-216ENST00000543170 J3QL48 77 aa11.23□□□□□ -0.61
COPS7A-216ENST00000543170 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
COPS7A-216ENST00000543170 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
COPS7A-216ENST00000543170 REG3GQ6UW15 175 aa11.22□□□□□ -0.61
COPS7A-216ENST00000543170 HERC1Q15751 4861 aa11.21□□□□□ -0.61
COPS7A-216ENST00000543170 IGKV2D-26A0A0A0MRZ7 120 aa11.21□□□□□ -0.61
COPS7A-216ENST00000543170 C5orf52A6NGY3 159 aa11.21□□□□□ -0.61
COPS7A-216ENST00000543170 RPL37AP8A6NKH3 93 aa11.21□□□□□ -0.61
COPS7A-216ENST00000543170 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
COPS7A-216ENST00000543170 BOD1L2Q8IYS8 172 aa11.21□□□□□ -0.61
COPS7A-216ENST00000543170 IGLV1-50A0A075B6I6 118 aa11.2□□□□□ -0.62
COPS7A-216ENST00000543170 BCE1O60756 84 aa11.2□□□□□ -0.62
COPS7A-216ENST00000543170 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
COPS7A-216ENST00000543170 DAND5Q8N907 189 aa11.19□□□□□ -0.62
COPS7A-216ENST00000543170 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
COPS7A-216ENST00000543170 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
COPS7A-216ENST00000543170 H0Y9J4 135 aa11.18□□□□□ -0.62
COPS7A-216ENST00000543170 M0R378 163 aa11.18□□□□□ -0.62
COPS7A-216ENST00000543170 TIMM17BO60830 172 aa11.18□□□□□ -0.62
COPS7A-216ENST00000543170 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
COPS7A-216ENST00000543170 ZNF861PO60384 105 aa11.17□□□□□ -0.62
COPS7A-216ENST00000543170 ANKRD39Q53RE8 183 aa11.17□□□□□ -0.62
COPS7A-216ENST00000543170 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
COPS7A-216ENST00000543170 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
COPS7A-216ENST00000543170 MIEN1Q9BRT3 115 aa11.17□□□□□ -0.62
COPS7A-216ENST00000543170 TNXBP22105 4242 aa11.16□□□□□ -0.62
COPS7A-216ENST00000543170 LITAFQ99732 161 aa11.16□□□□□ -0.62
COPS7A-216ENST00000543170 MT1HL1P0DM35 61 aa11.15□□□□□ -0.62
COPS7A-216ENST00000543170 RPL28P46779 137 aaKnown RBP11.15□□□□□ -0.62
COPS7A-216ENST00000543170 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.62
COPS7A-216ENST00000543170 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
COPS7A-216ENST00000543170 NDUFC2O95298 119 aa11.14□□□□□ -0.63
COPS7A-216ENST00000543170 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
COPS7A-216ENST00000543170 TMEM126AQ9H061 195 aa11.14□□□□□ -0.63
COPS7A-216ENST00000543170 NCR3O14931 201 aa11.13□□□□□ -0.63
COPS7A-216ENST00000543170 KRTAP13-1Q8IUC0 172 aa11.13□□□□□ -0.63
COPS7A-216ENST00000543170 SPANXB1Q9NS25 103 aaPredicted RBP11.13□□□□□ -0.63
COPS7A-216ENST00000543170 SOSTDC1Q6X4U4 206 aa11.11□□□□□ -0.63
COPS7A-216ENST00000543170 HSBP1L1C9JCN9 74 aa11.1□□□□□ -0.63
COPS7A-216ENST00000543170 TMEM238C9JI98 176 aa11.1□□□□□ -0.63
COPS7A-216ENST00000543170 PRYO14603 147 aa11.1□□□□□ -0.63
COPS7A-216ENST00000543170 UBE2AP49459 152 aa11.1□□□□□ -0.63
COPS7A-216ENST00000543170 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
COPS7A-216ENST00000543170 LINC00308Q8TCZ7 52 aa11.09□□□□□ -0.63
COPS7A-216ENST00000543170 KCNQ1DNQ9H478 68 aa11.09□□□□□ -0.63
COPS7A-216ENST00000543170 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
COPS7A-216ENST00000543170 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
COPS7A-216ENST00000543170 SPANXDQ9BXN6 97 aa11.08□□□□□ -0.64
COPS7A-216ENST00000543170 SPANXCQ9NY87 97 aa11.08□□□□□ -0.64
COPS7A-216ENST00000543170 TRBV10-3A0A0K0K1G6 114 aa11.07□□□□□ -0.64
COPS7A-216ENST00000543170 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
COPS7A-216ENST00000543170 SPRR1AP35321 89 aa11.07□□□□□ -0.64
COPS7A-216ENST00000543170 NPC2P61916 151 aa11.07□□□□□ -0.64
COPS7A-216ENST00000543170 FAM19A1Q7Z5A9 133 aa11.07□□□□□ -0.64
COPS7A-216ENST00000543170 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
COPS7A-216ENST00000543170 SCGB1D1O95968 90 aa11.06□□□□□ -0.64
COPS7A-216ENST00000543170 KRTAP10-8P60410 259 aa11.06□□□□□ -0.64
COPS7A-216ENST00000543170 S100A12P80511 92 aa11.06□□□□□ -0.64
COPS7A-216ENST00000543170 DDTP30046 118 aa11.05□□□□□ -0.64
COPS7A-216ENST00000543170 Q6ZVH6 145 aa11.05□□□□□ -0.64
COPS7A-216ENST00000543170 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
COPS7A-216ENST00000543170 IGLV6-57P01721 117 aa11.04□□□□□ -0.64
COPS7A-216ENST00000543170 PRLHP81277 87 aa11.04□□□□□ -0.64
COPS7A-216ENST00000543170 COPS9Q8WXC6 57 aa11.04□□□□□ -0.64
COPS7A-216ENST00000543170 KRTAP4-16G5E9R7 235 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-216ENST00000543170 IFITM1P13164 125 aa11.02□□□□□ -0.65
COPS7A-216ENST00000543170 S100A7L2Q5SY68 101 aa11.02□□□□□ -0.65
COPS7A-216ENST00000543170 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
COPS7A-216ENST00000543170 ETDCA0A1B0GVM5 59 aa10.99□□□□□ -0.65
COPS7A-216ENST00000543170 TRAV23DV6A0A075B6W5 121 aa10.98□□□□□ -0.65
COPS7A-216ENST00000543170 RPL13AP40429 203 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 291.4 ms