RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PHF5AQ7RTV0 110 aaKnown RBP12.1□□□□□ -0.47
DDX55-207ENST00000540763 IGLV5-37A0A075B6J1 123 aa12.09□□□□□ -0.47
DDX55-207ENST00000540763 SMIM13P0DJ93 91 aa12.08□□□□□ -0.48
DDX55-207ENST00000540763 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
DDX55-207ENST00000540763 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
DDX55-207ENST00000540763 C22orf24Q9Y442 160 aa12.07□□□□□ -0.48
DDX55-207ENST00000540763 HERC1Q15751 4861 aa12.07□□□□□ -0.48
DDX55-207ENST00000540763 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
DDX55-207ENST00000540763 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
DDX55-207ENST00000540763 MRPL55Q7Z7F7 128 aaKnown RBP12.05□□□□□ -0.48
DDX55-207ENST00000540763 ATOH7Q8N100 152 aa12.05□□□□□ -0.48
DDX55-207ENST00000540763 MIR7-3HGQ8N6C7 128 aa12.05□□□□□ -0.48
DDX55-207ENST00000540763 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
DDX55-207ENST00000540763 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
DDX55-207ENST00000540763 A0A0J9YXY3 114 aa12.03□□□□□ -0.48
DDX55-207ENST00000540763 VPREB1P12018 145 aa12.03□□□□□ -0.48
DDX55-207ENST00000540763 UBE2BP63146 152 aa12.03□□□□□ -0.48
DDX55-207ENST00000540763 PSORS1C2Q9UIG4 136 aa12.03□□□□□ -0.48
DDX55-207ENST00000540763 SRRM2Q9UQ35 2752 aaKnown RBP12.03□□□□□ -0.48
DDX55-207ENST00000540763 LOC107984156A0A0G2JMH3 177 aa12.02□□□□□ -0.49
DDX55-207ENST00000540763 ZNF815PA8K554 130 aa12.02□□□□□ -0.49
DDX55-207ENST00000540763 ANKRD39Q53RE8 183 aa12.02□□□□□ -0.49
DDX55-207ENST00000540763 ARL17AQ8IVW1 177 aa12.02□□□□□ -0.49
DDX55-207ENST00000540763 TIMM17BO60830 172 aa12.01□□□□□ -0.49
DDX55-207ENST00000540763 HSBP1L1C9JCN9 74 aa11.99□□□□□ -0.49
DDX55-207ENST00000540763 KRTAP11-1Q8IUC1 163 aa11.99□□□□□ -0.49
DDX55-207ENST00000540763 SCGB1D1O95968 90 aa11.98□□□□□ -0.49
DDX55-207ENST00000540763 LINC00167Q96N53 147 aa11.98□□□□□ -0.49
DDX55-207ENST00000540763 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
DDX55-207ENST00000540763 BOD1L2Q8IYS8 172 aa11.97□□□□□ -0.49
DDX55-207ENST00000540763 Q8NDZ9 215 aa11.97□□□□□ -0.49
DDX55-207ENST00000540763 TTTY13Q9BZ97 58 aa11.97□□□□□ -0.49
DDX55-207ENST00000540763 PKHD1L1Q86WI1 4243 aa11.96□□□□□ -0.49
DDX55-207ENST00000540763 C1orf137Q5JT78 98 aa11.96□□□□□ -0.49
DDX55-207ENST00000540763 DAND5Q8N907 189 aa11.96□□□□□ -0.49
DDX55-207ENST00000540763 LITAFQ99732 161 aa11.96□□□□□ -0.49
DDX55-207ENST00000540763 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
DDX55-207ENST00000540763 MYCBP2O75592 4640 aa11.96□□□□□ -0.5
DDX55-207ENST00000540763 ADAMTSL4-AS1Q5T5F5 129 aa11.94□□□□□ -0.5
DDX55-207ENST00000540763 TMA7Q9Y2S6 64 aaKnown RBP11.94□□□□□ -0.5
DDX55-207ENST00000540763 M0R378 163 aa11.93□□□□□ -0.5
DDX55-207ENST00000540763 NDUFC2O95298 119 aa11.93□□□□□ -0.5
DDX55-207ENST00000540763 IGLV7-43P04211 117 aa11.93□□□□□ -0.5
DDX55-207ENST00000540763 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■■□ 21.5
DDX55-207ENST00000540763 SPINK6Q6UWN8 80 aa11.93□□□□□ -0.5
DDX55-207ENST00000540763 IGLV1-50A0A075B6I6 118 aa11.92□□□□□ -0.5
DDX55-207ENST00000540763 GAGE10A6NGK3 116 aa11.92□□□□□ -0.5
DDX55-207ENST00000540763 TMEM238C9JI98 176 aa11.92□□□□□ -0.5
DDX55-207ENST00000540763 JOSD1Q15040 202 aaPredicted RBP11.92□□□□□ -0.5
DDX55-207ENST00000540763 SCGB1D4Q6XE38 83 aa11.92□□□□□ -0.5
DDX55-207ENST00000540763 PCP2Q8IVA1 136 aa11.92□□□□□ -0.5
DDX55-207ENST00000540763 RPL37AP8A6NKH3 93 aa11.91□□□□□ -0.5
DDX55-207ENST00000540763 J3QL48 77 aa11.91□□□□□ -0.5
DDX55-207ENST00000540763 TRBV10-2A0A0K0K1G8 114 aa11.9□□□□□ -0.5
DDX55-207ENST00000540763 SPANXDQ9BXN6 97 aa11.9□□□□□ -0.5
DDX55-207ENST00000540763 PPDPFQ9H3Y8 114 aa11.9□□□□□ -0.5
DDX55-207ENST00000540763 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
DDX55-207ENST00000540763 SOSTDC1Q6X4U4 206 aa11.89□□□□□ -0.51
DDX55-207ENST00000540763 Q6ZVH6 145 aa11.89□□□□□ -0.51
DDX55-207ENST00000540763 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
DDX55-207ENST00000540763 SPANXB1Q9NS25 103 aaPredicted RBP11.89□□□□□ -0.51
DDX55-207ENST00000540763 IGKV2-28A0A075B6P5 120 aa11.88□□□□□ -0.51
DDX55-207ENST00000540763 BCE1O60756 84 aa11.88□□□□□ -0.51
DDX55-207ENST00000540763 IGKV2D-28P01615 120 aa11.88□□□□□ -0.51
DDX55-207ENST00000540763 COPS9Q8WXC6 57 aa11.88□□□□□ -0.51
DDX55-207ENST00000540763 NCR3O14931 201 aa11.87□□□□□ -0.51
DDX55-207ENST00000540763 OXTP01178 125 aa11.86□□□□□ -0.51
DDX55-207ENST00000540763 KRTAP29-1A8MX34 341 aaPredicted RBP11.85□□□□□ -0.51
DDX55-207ENST00000540763 EIF4EBP3O60516 100 aaPredicted RBP11.85□□□□□ -0.51
DDX55-207ENST00000540763 IFITM1P13164 125 aa11.85□□□□□ -0.51
DDX55-207ENST00000540763 NPC2P61916 151 aa11.85□□□□□ -0.51
DDX55-207ENST00000540763 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
DDX55-207ENST00000540763 ZNF861PO60384 105 aa11.84□□□□□ -0.51
DDX55-207ENST00000540763 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
DDX55-207ENST00000540763 TMEM126AQ9H061 195 aa11.84□□□□□ -0.51
DDX55-207ENST00000540763 PRYO14603 147 aa11.83□□□□□ -0.52
DDX55-207ENST00000540763 COX8AP10176 69 aa11.83□□□□□ -0.52
DDX55-207ENST00000540763 VAMP8Q9BV40 100 aa11.83□□□□□ -0.52
DDX55-207ENST00000540763 DLEU1O43261 78 aa11.82□□□□□ -0.52
DDX55-207ENST00000540763 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
DDX55-207ENST00000540763 S100A12P80511 92 aa11.82□□□□□ -0.52
DDX55-207ENST00000540763 KCNQ1DNQ9H478 68 aa11.82□□□□□ -0.52
DDX55-207ENST00000540763 H0Y9J4 135 aa11.81□□□□□ -0.52
DDX55-207ENST00000540763 TRBV10-3A0A0K0K1G6 114 aa11.8□□□□□ -0.52
DDX55-207ENST00000540763 DDTP30046 118 aa11.8□□□□□ -0.52
DDX55-207ENST00000540763 SPATA45Q537H7 98 aa11.8□□□□□ -0.52
DDX55-207ENST00000540763 PYY3Q5JQD4 70 aa11.8□□□□□ -0.52
DDX55-207ENST00000540763 KRTAP13-1Q8IUC0 172 aa11.8□□□□□ -0.52
DDX55-207ENST00000540763 PAM16Q9Y3D7 125 aa11.8□□□□□ -0.52
DDX55-207ENST00000540763 IGLV6-57P01721 117 aa11.79□□□□□ -0.52
DDX55-207ENST00000540763 SPRR1AP35321 89 aa11.79□□□□□ -0.52
DDX55-207ENST00000540763 LINC00518Q8N0U6 118 aa11.79□□□□□ -0.52
DDX55-207ENST00000540763 CBY1Q9Y3M2 126 aa11.79□□□□□ -0.52
DDX55-207ENST00000540763 UBE2AP49459 152 aa11.78□□□□□ -0.52
DDX55-207ENST00000540763 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
DDX55-207ENST00000540763 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
DDX55-207ENST00000540763 FAM19A1Q7Z5A9 133 aa11.76□□□□□ -0.53
DDX55-207ENST00000540763 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
DDX55-207ENST00000540763 LINC01600Q96MT4 127 aa11.75□□□□□ -0.53
DDX55-207ENST00000540763 KRTAP4-16G5E9R7 235 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms