RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ACYP2P14621 99 aa6.96□□□□□ -1.3
COL4A6-208ENST00000538570 RAI1Q7Z5J4 1906 aaPredicted RBP6.96□□□□□ -1.3
COL4A6-208ENST00000538570 SPATA3Q8NHX4 192 aa6.96□□□□□ -1.3
COL4A6-208ENST00000538570 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
COL4A6-208ENST00000538570 KRTAP10-9P60411 292 aa6.95□□□□□ -1.3
COL4A6-208ENST00000538570 IGLV8-61A0A075B6I0 122 aa6.94□□□□□ -1.3
COL4A6-208ENST00000538570 IGLV5-39A0A0G2JS06 123 aa6.94□□□□□ -1.3
COL4A6-208ENST00000538570 LINC01546A6NGU7 62 aa6.94□□□□□ -1.3
COL4A6-208ENST00000538570 LRP4O75096 1905 aa6.93□□□□□ -1.3
COL4A6-208ENST00000538570 EXPH5Q8NEV8 1989 aa6.93□□□□□ -1.3
COL4A6-208ENST00000538570 TRAV22A0A0B4J277 110 aa6.93□□□□□ -1.3
COL4A6-208ENST00000538570 JMJD1CQ15652 2540 aa6.93□□□□□ -1.3
COL4A6-208ENST00000538570 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
COL4A6-208ENST00000538570 FAM218AQ96MZ4 157 aa6.92□□□□□ -1.3
COL4A6-208ENST00000538570 PTPRSQ13332 1948 aa6.92□□□□□ -1.3
COL4A6-208ENST00000538570 ANKRD11Q6UB99 2663 aaPredicted RBP6.92□□□□□ -1.3
COL4A6-208ENST00000538570 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
COL4A6-208ENST00000538570 USP9XQ93008 2570 aaPredicted RBP6.91□□□□□ -1.3
COL4A6-208ENST00000538570 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
COL4A6-208ENST00000538570 AGRNO00468 2067 aa6.91□□□□□ -1.3
COL4A6-208ENST00000538570 DOPEY1Q5JWR5 2465 aa6.91□□□□□ -1.3
COL4A6-208ENST00000538570 ERC2-IT1O76042 136 aa6.91□□□□□ -1.3
COL4A6-208ENST00000538570 TLN2Q9Y4G6 2542 aa6.9□□□□□ -1.3
COL4A6-208ENST00000538570 C11orf72Q8NBR9 251 aa6.9□□□□□ -1.3
COL4A6-208ENST00000538570 FHL3Q13643 280 aa6.9□□□□□ -1.31
COL4A6-208ENST00000538570 CPAMD8Q8IZJ3 1885 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 ABCA12Q86UK0 2595 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 A0A1B0GW54 56 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 IGHV3OR16-9A0A0B4J2B5 98 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 MOBPQ13875 183 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 COA5Q86WW8 74 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 ZFYVE26Q68DK2 2539 aa6.89□□□□□ -1.31
COL4A6-208ENST00000538570 Q6ZQT0 140 aa6.88□□□□□ -1.31
COL4A6-208ENST00000538570 SPACA4Q8TDM5 124 aa6.88□□□□□ -1.31
COL4A6-208ENST00000538570 H3BPC8 53 aa6.88□□□□□ -1.31
COL4A6-208ENST00000538570 A0A1W2PPR1 153 aa6.87□□□□□ -1.31
COL4A6-208ENST00000538570 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
COL4A6-208ENST00000538570 USP9YO00507 2555 aaPredicted RBP6.87□□□□□ -1.31
COL4A6-208ENST00000538570 CHD8Q9HCK8 2581 aa6.87□□□□□ -1.31
COL4A6-208ENST00000538570 COL5A1P20908 1838 aaPredicted RBP6.86□□□□□ -1.31
COL4A6-208ENST00000538570 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
COL4A6-208ENST00000538570 LOC110117498A0A087WWA1 95 aa6.85□□□□□ -1.31
COL4A6-208ENST00000538570 UQCR11O14957 56 aa6.85□□□□□ -1.31
COL4A6-208ENST00000538570 IGLV5-45A0A087WSX0 123 aa6.85□□□□□ -1.31
COL4A6-208ENST00000538570 LINC00315P59091 139 aa6.84□□□□□ -1.31
COL4A6-208ENST00000538570 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
COL4A6-208ENST00000538570 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.32
COL4A6-208ENST00000538570 H7BZZ5 65 aa6.83□□□□□ -1.32
COL4A6-208ENST00000538570 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
COL4A6-208ENST00000538570 Q8NBF4 154 aa6.83□□□□□ -1.32
COL4A6-208ENST00000538570 LINC00313P59037 77 aa6.83□□□□□ -1.32
COL4A6-208ENST00000538570 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
COL4A6-208ENST00000538570 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
COL4A6-208ENST00000538570 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
COL4A6-208ENST00000538570 SPTBN4Q9H254 2564 aa6.82□□□□□ -1.32
COL4A6-208ENST00000538570 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
COL4A6-208ENST00000538570 SETD2Q9BYW2 2564 aaPredicted RBP6.82□□□□□ -1.32
COL4A6-208ENST00000538570 Q6ZRX8 168 aa6.82□□□□□ -1.32
COL4A6-208ENST00000538570 FN1P02751 2386 aaKnown RBP6.81□□□□□ -1.32
COL4A6-208ENST00000538570 H3BNG1 76 aa6.8□□□□□ -1.32
COL4A6-208ENST00000538570 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
COL4A6-208ENST00000538570 CENPFP49454 3210 aa6.79□□□□□ -1.32
COL4A6-208ENST00000538570 EPM2AB3EWF7 344 aa6.78□□□□□ -1.32
COL4A6-208ENST00000538570 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
COL4A6-208ENST00000538570 TET2Q6N021 2002 aaPredicted RBP6.77□□□□□ -1.33
COL4A6-208ENST00000538570 ST20-AS1Q8NBB2 130 aa6.77□□□□□ -1.33
COL4A6-208ENST00000538570 Q5XG85 94 aa6.77□□□□□ -1.33
COL4A6-208ENST00000538570 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
COL4A6-208ENST00000538570 LRRK2Q5S007 2527 aa6.77□□□□□ -1.33
COL4A6-208ENST00000538570 C16orf90A8MZG2 172 aa6.76□□□□□ -1.33
COL4A6-208ENST00000538570 ZNF462Q96JM2 2506 aa6.76□□□□□ -1.33
COL4A6-208ENST00000538570 MUC4Q99102 2169 aa6.76□□□□□ -1.33
COL4A6-208ENST00000538570 CHTF8P0CG12 524 aa6.76□□□□□ -1.33
COL4A6-208ENST00000538570 Q6ZRP5 223 aa6.76□□□□□ -1.33
COL4A6-208ENST00000538570 RTL8CO15255 209 aa6.75□□□□□ -1.33
COL4A6-208ENST00000538570 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
COL4A6-208ENST00000538570 Q96NJ1 140 aa6.74□□□□□ -1.33
COL4A6-208ENST00000538570 FASNP49327 2511 aaKnown RBP6.73□□□□□ -1.33
COL4A6-208ENST00000538570 A8MWP4 228 aa6.73□□□□□ -1.33
COL4A6-208ENST00000538570 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
COL4A6-208ENST00000538570 Q1T7F1 81 aa6.73□□□□□ -1.33
COL4A6-208ENST00000538570 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
COL4A6-208ENST00000538570 LITAFQ99732 161 aa6.73□□□□□ -1.33
COL4A6-208ENST00000538570 PKD1L2Q7Z442 2459 aa6.72□□□□□ -1.33
COL4A6-208ENST00000538570 LUZP6Q538Z0 58 aa6.72□□□□□ -1.33
COL4A6-208ENST00000538570 MTORP42345 2549 aa6.72□□□□□ -1.33
COL4A6-208ENST00000538570 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
COL4A6-208ENST00000538570 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
COL4A6-208ENST00000538570 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
COL4A6-208ENST00000538570 K7EQZ3 153 aa6.7□□□□□ -1.34
COL4A6-208ENST00000538570 IGLV6-57P01721 117 aa6.7□□□□□ -1.34
COL4A6-208ENST00000538570 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
COL4A6-208ENST00000538570 LINC00588Q9Y4M8 146 aa6.69□□□□□ -1.34
COL4A6-208ENST00000538570 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
COL4A6-208ENST00000538570 Q8NAQ8 132 aa6.67□□□□□ -1.34
COL4A6-208ENST00000538570 PTPRBP23467 1997 aa6.66□□□□□ -1.34
COL4A6-208ENST00000538570 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
COL4A6-208ENST00000538570 POLQO75417 2590 aa6.64□□□□□ -1.35
COL4A6-208ENST00000538570 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms