RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 FAM19A3Q7Z5A8 133 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 NKAPP1Q8N9T2 125 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 GEMIN7Q9H840 131 aaKnown RBP3.08□□□□□ -1.92
SNHG1-207ENST00000537965 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 SRP19P09132 144 aaKnown RBP3.07□□□□□ -1.92
SNHG1-207ENST00000537965 RPL23P62829 140 aaKnown RBP3.07□□□□□ -1.92
SNHG1-207ENST00000537965 ADIRFQ15847 76 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 ORMDL2Q53FV1 153 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 C2orf66Q6UXQ4 117 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 FP248Q71RG6 208 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-207ENST00000537965 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 ATP5L2Q7Z4Y8 100 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 AMELXQ99217 191 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 RETNLBQ9BQ08 111 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 GNB1LQ9BYB4 327 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 MAP1LC3AQ9H492 121 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 NAT8Q9UHE5 227 aa3.07□□□□□ -1.92
SNHG1-207ENST00000537965 LINC01549A6NIU2 74 aa3.06□□□□□ -1.92
SNHG1-207ENST00000537965 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
SNHG1-207ENST00000537965 ZC2HC1BQ5TFG8 222 aa3.06□□□□□ -1.92
SNHG1-207ENST00000537965 MRPL54Q6P161 138 aaKnown RBP3.06□□□□□ -1.92
SNHG1-207ENST00000537965 Q8N8P6 123 aa3.06□□□□□ -1.92
SNHG1-207ENST00000537965 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
SNHG1-207ENST00000537965 LOC389332A0A1B0GUA5 103 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 A0A1B0GVG6 124 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 PEA15Q15121 130 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 KIAA1644Q3SXP7 199 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 PDZD11Q5EBL8 140 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 KRTAP13-1Q8IUC0 172 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 NXT2Q9NPJ8 142 aaKnown RBP3.05□□□□□ -1.92
SNHG1-207ENST00000537965 CDKN2A-AS1Q9UH64 79 aa3.05□□□□□ -1.92
SNHG1-207ENST00000537965 IGIPA6NJ69 53 aa3.04□□□□□ -1.92
SNHG1-207ENST00000537965 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
SNHG1-207ENST00000537965 FAM19A1Q7Z5A9 133 aa3.04□□□□□ -1.92
SNHG1-207ENST00000537965 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
SNHG1-207ENST00000537965 TIMM17AQ99595 171 aa3.04□□□□□ -1.92
SNHG1-207ENST00000537965 NDUFA12Q9UI09 145 aa3.04□□□□□ -1.92
SNHG1-207ENST00000537965 FAT4Q6V0I7 4981 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 TINCRA0A1B0GVN0 87 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 ATP5LO75964 103 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 SPINK1P00995 79 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 RAB5BP61020 215 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 COX17Q14061 63 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 ERASQ7Z444 233 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 AKAP14Q86UN6 197 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 CBLN2Q8IUK8 224 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 PLEKHB2Q96CS7 222 aa3.03□□□□□ -1.92
SNHG1-207ENST00000537965 ZNF706Q9Y5V0 76 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-207ENST00000537965 H3BRM9 83 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 SFTA2Q6UW10 78 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 FAM19A2Q8N3H0 131 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 DAND5Q8N907 189 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 TOMM6Q96B49 74 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 TMEM126AQ9H061 195 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
SNHG1-207ENST00000537965 MT-ND4LP03901 98 aa3.01□□□□□ -1.93
SNHG1-207ENST00000537965 HERV-K104P63124 156 aa3.01□□□□□ -1.93
SNHG1-207ENST00000537965 PRLHP81277 87 aa3.01□□□□□ -1.93
SNHG1-207ENST00000537965 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
SNHG1-207ENST00000537965 C3orf22Q8N5N4 141 aa3.01□□□□□ -1.93
SNHG1-207ENST00000537965 HIGD2AQ9BW72 106 aa3.01□□□□□ -1.93
SNHG1-207ENST00000537965 A0A0U1RRA0 63 aa3□□□□□ -1.93
SNHG1-207ENST00000537965 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SNHG1-207ENST00000537965 PFN2P35080 140 aa3□□□□□ -1.93
SNHG1-207ENST00000537965 PMVKQ15126 192 aa3□□□□□ -1.93
SNHG1-207ENST00000537965 TMEM238C9JI98 176 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 C9JQL5 133 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 M0R378 163 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 SPINK8P0C7L1 97 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 RAB14P61106 215 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
SNHG1-207ENST00000537965 S100A12P80511 92 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 Q6ZVQ6 151 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 SPRR4Q96PI1 79 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 CST9LQ9H4G1 147 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 SND1-IT1Q9HBX3 110 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 ERG28Q9UKR5 140 aa2.99□□□□□ -1.93
SNHG1-207ENST00000537965 KRTAP16-1A8MUX0 517 aa2.98□□□□□ -1.93
SNHG1-207ENST00000537965 SLC25A20O43772 301 aa2.98□□□□□ -1.93
SNHG1-207ENST00000537965 SCO1O75880 301 aa2.98□□□□□ -1.93
SNHG1-207ENST00000537965 SSBP3-AS1Q7Z2R9 100 aa2.98□□□□□ -1.93
SNHG1-207ENST00000537965 Q8NBF4 154 aa2.98□□□□□ -1.93
SNHG1-207ENST00000537965 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
SNHG1-207ENST00000537965 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
SNHG1-207ENST00000537965 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
SNHG1-207ENST00000537965 SMCO4Q9NRQ5 59 aa2.97□□□□□ -1.93
SNHG1-207ENST00000537965 TRAV9-1A0A075B6T8 112 aa2.96□□□□□ -1.94
SNHG1-207ENST00000537965 ETDCA0A1B0GVM5 59 aa2.96□□□□□ -1.94
SNHG1-207ENST00000537965 LINC01546A6NGU7 62 aa2.96□□□□□ -1.94
SNHG1-207ENST00000537965 LINC00587B1AMM8 73 aa2.96□□□□□ -1.94
SNHG1-207ENST00000537965 IGLC3P0DOY3 106 aa2.96□□□□□ -1.94
SNHG1-207ENST00000537965 ADCYAP1P18509 176 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms