RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 VPREB1P12018 145 aa6.95□□□□□ -1.3
TNFRSF1A-208ENST00000536194 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
TNFRSF1A-208ENST00000536194 TP73-AS1Q9UF72 201 aa6.95□□□□□ -1.3
TNFRSF1A-208ENST00000536194 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
TNFRSF1A-208ENST00000536194 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
TNFRSF1A-208ENST00000536194 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
TNFRSF1A-208ENST00000536194 UBE2BP63146 152 aa6.94□□□□□ -1.3
TNFRSF1A-208ENST00000536194 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
TNFRSF1A-208ENST00000536194 MEIG1Q5JSS6 88 aa6.94□□□□□ -1.3
TNFRSF1A-208ENST00000536194 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
TNFRSF1A-208ENST00000536194 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF1A-208ENST00000536194 NMUP48645 174 aa6.93□□□□□ -1.3
TNFRSF1A-208ENST00000536194 SNRPEP62304 92 aaKnown RBP6.93□□□□□ -1.3
TNFRSF1A-208ENST00000536194 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
TNFRSF1A-208ENST00000536194 LINC00167Q96N53 147 aa6.93□□□□□ -1.3
TNFRSF1A-208ENST00000536194 LRP1Q07954 4544 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 C5orf52A6NGY3 159 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 RPL37AP8A6NKH3 93 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 S100A6P06703 90 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 S100A2P29034 98 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 ATOH7Q8N100 152 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
TNFRSF1A-208ENST00000536194 C20orf202A1L168 122 aa6.91□□□□□ -1.3
TNFRSF1A-208ENST00000536194 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
TNFRSF1A-208ENST00000536194 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
TNFRSF1A-208ENST00000536194 DAND5Q8N907 189 aa6.91□□□□□ -1.3
TNFRSF1A-208ENST00000536194 NKAPP1Q8N9T2 125 aa6.91□□□□□ -1.3
TNFRSF1A-208ENST00000536194 A0A0J9YXY3 114 aa6.9□□□□□ -1.3
TNFRSF1A-208ENST00000536194 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
TNFRSF1A-208ENST00000536194 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
TNFRSF1A-208ENST00000536194 SPINK6Q6UWN8 80 aa6.9□□□□□ -1.3
TNFRSF1A-208ENST00000536194 FAT3Q8TDW7 4589 aa6.89□□□□□ -1.31
TNFRSF1A-208ENST00000536194 OXTP01178 125 aa6.89□□□□□ -1.31
TNFRSF1A-208ENST00000536194 ADAMTSL4-AS1Q5T5F5 129 aa6.89□□□□□ -1.31
TNFRSF1A-208ENST00000536194 IGLV1-50A0A075B6I6 118 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 RPL24P83731 157 aaKnown RBP6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 LITAFQ99732 161 aa6.88□□□□□ -1.31
TNFRSF1A-208ENST00000536194 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
TNFRSF1A-208ENST00000536194 MT1HL1P0DM35 61 aa6.87□□□□□ -1.31
TNFRSF1A-208ENST00000536194 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
TNFRSF1A-208ENST00000536194 J3QL48 77 aa6.86□□□□□ -1.31
TNFRSF1A-208ENST00000536194 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
TNFRSF1A-208ENST00000536194 M0R378 163 aa6.85□□□□□ -1.31
TNFRSF1A-208ENST00000536194 NCR3O14931 201 aa6.85□□□□□ -1.31
TNFRSF1A-208ENST00000536194 BCE1O60756 84 aa6.85□□□□□ -1.31
TNFRSF1A-208ENST00000536194 NPC2P61916 151 aa6.85□□□□□ -1.31
TNFRSF1A-208ENST00000536194 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
TNFRSF1A-208ENST00000536194 H0Y9J4 135 aa6.84□□□□□ -1.31
TNFRSF1A-208ENST00000536194 ZNF861PO60384 105 aa6.84□□□□□ -1.31
TNFRSF1A-208ENST00000536194 TIMM17BO60830 172 aa6.84□□□□□ -1.31
TNFRSF1A-208ENST00000536194 AKR1D1P51857 326 aa6.84□□□□□ -1.31
TNFRSF1A-208ENST00000536194 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
TNFRSF1A-208ENST00000536194 LINC01600Q96MT4 127 aa6.84□□□□□ -1.31
TNFRSF1A-208ENST00000536194 REG3GQ6UW15 175 aa6.83□□□□□ -1.32
TNFRSF1A-208ENST00000536194 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
TNFRSF1A-208ENST00000536194 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
TNFRSF1A-208ENST00000536194 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
TNFRSF1A-208ENST00000536194 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
TNFRSF1A-208ENST00000536194 TRBV10-3A0A0K0K1G6 114 aa6.81□□□□□ -1.32
TNFRSF1A-208ENST00000536194 NDUFC2O95298 119 aa6.81□□□□□ -1.32
TNFRSF1A-208ENST00000536194 PRLHP81277 87 aa6.81□□□□□ -1.32
TNFRSF1A-208ENST00000536194 LINC00308Q8TCZ7 52 aa6.81□□□□□ -1.32
TNFRSF1A-208ENST00000536194 MIEN1Q9BRT3 115 aa6.81□□□□□ -1.32
TNFRSF1A-208ENST00000536194 TRBV10-2A0A0K0K1G8 114 aa6.8□□□□□ -1.32
TNFRSF1A-208ENST00000536194 SCGB1D1O95968 90 aa6.8□□□□□ -1.32
TNFRSF1A-208ENST00000536194 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
TNFRSF1A-208ENST00000536194 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
TNFRSF1A-208ENST00000536194 SPRR1AP35321 89 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 UBE2AP49459 152 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 SPANXDQ9BXN6 97 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 SPANXCQ9NY87 97 aa6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-208ENST00000536194 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF1A-208ENST00000536194 PRYO14603 147 aa6.78□□□□□ -1.32
TNFRSF1A-208ENST00000536194 HSBP1L1C9JCN9 74 aa6.77□□□□□ -1.33
TNFRSF1A-208ENST00000536194 IGLV6-57P01721 117 aa6.77□□□□□ -1.33
TNFRSF1A-208ENST00000536194 DDTP30046 118 aa6.77□□□□□ -1.33
TNFRSF1A-208ENST00000536194 PRR26Q8N8Z3 221 aa6.77□□□□□ -1.33
TNFRSF1A-208ENST00000536194 HERC1Q15751 4861 aa6.77□□□□□ -1.33
TNFRSF1A-208ENST00000536194 TNXBP22105 4242 aa6.76□□□□□ -1.33
TNFRSF1A-208ENST00000536194 JOSD1Q15040 202 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF1A-208ENST00000536194 LINC00337Q8N6G1 96 aa6.75□□□□□ -1.33
TNFRSF1A-208ENST00000536194 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
TNFRSF1A-208ENST00000536194 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
TNFRSF1A-208ENST00000536194 A0A087X002 238 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 COX8AP10176 69 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 IFITM1P13164 125 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 Q6ZVH6 145 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms