RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ORMDL1Q9P0S3 153 aa12.41□□□□□ -0.42
RAB40C-203ENST00000535977 LINC00959A0A1B0GUT2 108 aa12.41□□□□□ -0.42
RAB40C-203ENST00000535977 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
RAB40C-203ENST00000535977 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
RAB40C-203ENST00000535977 SMIM26A0A096LP01 95 aa12.39□□□□□ -0.43
RAB40C-203ENST00000535977 CCL18P55774 89 aa12.38□□□□□ -0.43
RAB40C-203ENST00000535977 LINC00158P58513 81 aa12.38□□□□□ -0.43
RAB40C-203ENST00000535977 APOC4P55056 127 aa12.38□□□□□ -0.43
RAB40C-203ENST00000535977 PAX4O43316 350 aa12.36□□□□□ -0.43
RAB40C-203ENST00000535977 SNURFQ9Y675 71 aa12.36□□□□□ -0.43
RAB40C-203ENST00000535977 TRAV7A0A075B6U4 112 aa12.36□□□□□ -0.43
RAB40C-203ENST00000535977 C2CD3Q4AC94 2353 aa12.35□□□□□ -0.43
RAB40C-203ENST00000535977 TRBV10-3A0A0K0K1G6 114 aa12.35□□□□□ -0.43
RAB40C-203ENST00000535977 C6orf226Q5I0X4 101 aa12.35□□□□□ -0.43
RAB40C-203ENST00000535977 RMI2Q96E14 147 aa12.35□□□□□ -0.43
RAB40C-203ENST00000535977 LINC00474Q9P2X8 69 aa12.35□□□□□ -0.43
RAB40C-203ENST00000535977 INAFM1C9JVW0 142 aa12.34□□□□□ -0.43
RAB40C-203ENST00000535977 KLKP1Q107X0 134 aa12.34□□□□□ -0.43
RAB40C-203ENST00000535977 Q8IZM0 81 aa12.34□□□□□ -0.43
RAB40C-203ENST00000535977 UBL5Q9BZL1 73 aa12.33□□□□□ -0.44
RAB40C-203ENST00000535977 JMJD7-PLA2G4BH0Y9G9 81 aa12.33□□□□□ -0.44
RAB40C-203ENST00000535977 F8WEM9 126 aa12.32□□□□□ -0.44
RAB40C-203ENST00000535977 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
RAB40C-203ENST00000535977 BRK1Q8WUW1 75 aa12.31□□□□□ -0.44
RAB40C-203ENST00000535977 ATRQ13535 2644 aa12.3□□□□□ -0.44
RAB40C-203ENST00000535977 TRAV10A0A0B4J240 114 aa12.3□□□□□ -0.44
RAB40C-203ENST00000535977 TRBV7-6A0A0J9YX20 115 aa12.29□□□□□ -0.44
RAB40C-203ENST00000535977 MIFP14174 115 aa12.29□□□□□ -0.44
RAB40C-203ENST00000535977 SEC61GP60059 68 aa12.29□□□□□ -0.44
RAB40C-203ENST00000535977 DAD1P61803 113 aa12.29□□□□□ -0.44
RAB40C-203ENST00000535977 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
RAB40C-203ENST00000535977 RBM3P98179 157 aaKnown RBP12.28□□□□□ -0.44
RAB40C-203ENST00000535977 DEFB135Q30KP9 77 aa12.28□□□□□ -0.44
RAB40C-203ENST00000535977 BCE1O60756 84 aa12.28□□□□□ -0.44
RAB40C-203ENST00000535977 CD164L2Q6UWJ8 174 aa12.28□□□□□ -0.44
RAB40C-203ENST00000535977 C1orf195Q5TG92 126 aa12.27□□□□□ -0.44
RAB40C-203ENST00000535977 V9GYY9 64 aa12.27□□□□□ -0.44
RAB40C-203ENST00000535977 IGHV4-28A0A0C4DH34 117 aa12.27□□□□□ -0.45
RAB40C-203ENST00000535977 COX17Q14061 63 aa12.26□□□□□ -0.45
RAB40C-203ENST00000535977 Q8N814 137 aa12.25□□□□□ -0.45
RAB40C-203ENST00000535977 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
RAB40C-203ENST00000535977 A0A096LPF7 62 aa12.24□□□□□ -0.45
RAB40C-203ENST00000535977 SPART-AS1P0CW21 52 aa12.24□□□□□ -0.45
RAB40C-203ENST00000535977 LINC00269Q8N2A0 174 aa12.24□□□□□ -0.45
RAB40C-203ENST00000535977 Q8NAQ8 132 aa12.23□□□□□ -0.45
RAB40C-203ENST00000535977 SPATA3Q8NHX4 192 aa12.23□□□□□ -0.45
RAB40C-203ENST00000535977 LINC01547P58512 204 aaPredicted RBP12.22□□□□□ -0.45
RAB40C-203ENST00000535977 ANGP03950 147 aaKnown RBP12.22□□□□□ -0.45
RAB40C-203ENST00000535977 REG3AQ06141 175 aa12.22□□□□□ -0.45
RAB40C-203ENST00000535977 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
RAB40C-203ENST00000535977 CLPSL2Q6UWE3 100 aa12.21□□□□□ -0.45
RAB40C-203ENST00000535977 HAMPP81172 84 aa12.21□□□□□ -0.46
RAB40C-203ENST00000535977 M0R2N4 97 aa12.2□□□□□ -0.46
RAB40C-203ENST00000535977 DEFB4AO15263 64 aa12.2□□□□□ -0.46
RAB40C-203ENST00000535977 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
RAB40C-203ENST00000535977 LELP1Q5T871 98 aa12.2□□□□□ -0.46
RAB40C-203ENST00000535977 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
RAB40C-203ENST00000535977 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
RAB40C-203ENST00000535977 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
RAB40C-203ENST00000535977 Q6ZQT0 140 aa12.18□□□□□ -0.46
RAB40C-203ENST00000535977 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
RAB40C-203ENST00000535977 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
RAB40C-203ENST00000535977 TM2D3Q9BRN9 247 aa12.17□□□□□ -0.46
RAB40C-203ENST00000535977 NDUFC1O43677 76 aa12.17□□□□□ -0.46
RAB40C-203ENST00000535977 MPLKIPQ8TAP9 179 aa12.17□□□□□ -0.46
RAB40C-203ENST00000535977 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
RAB40C-203ENST00000535977 Q6ZVQ6 151 aa12.16□□□□□ -0.46
RAB40C-203ENST00000535977 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
RAB40C-203ENST00000535977 COL6A5A8TX70 2615 aa12.15□□□□□ -0.46
RAB40C-203ENST00000535977 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
RAB40C-203ENST00000535977 ATP5EP56381 51 aaPredicted RBP12.15□□□□□ -0.47
RAB40C-203ENST00000535977 TRBV7-4A0A0J9YYF1 115 aa12.14□□□□□ -0.47
RAB40C-203ENST00000535977 Q8N3U1 123 aa12.14□□□□□ -0.47
RAB40C-203ENST00000535977 IGLV10-54A0A075B6I4 117 aa12.12□□□□□ -0.47
RAB40C-203ENST00000535977 PRR34Q9NV39 138 aa12.12□□□□□ -0.47
RAB40C-203ENST00000535977 LOC110117498A0A087WWA1 95 aa12.11□□□□□ -0.47
RAB40C-203ENST00000535977 HTN3P15516 51 aa12.1□□□□□ -0.47
RAB40C-203ENST00000535977 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
RAB40C-203ENST00000535977 CXCL6P80162 114 aa12.09□□□□□ -0.47
RAB40C-203ENST00000535977 LAMTOR3Q9UHA4 124 aa12.09□□□□□ -0.47
RAB40C-203ENST00000535977 H3BNG1 76 aa12.09□□□□□ -0.47
RAB40C-203ENST00000535977 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
RAB40C-203ENST00000535977 STAB1Q9NY15 2570 aa12.08□□□□□ -0.48
RAB40C-203ENST00000535977 A0A0J9YWU9 116 aa12.08□□□□□ -0.48
RAB40C-203ENST00000535977 SPAG11BQ08648 103 aa12.08□□□□□ -0.48
RAB40C-203ENST00000535977 C6orf99Q4VX62 202 aa12.08□□□□□ -0.48
RAB40C-203ENST00000535977 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
RAB40C-203ENST00000535977 TMEM254Q8TBM7 123 aa12.07□□□□□ -0.48
RAB40C-203ENST00000535977 NREPQ16612 68 aa12.07□□□□□ -0.48
RAB40C-203ENST00000535977 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
RAB40C-203ENST00000535977 KLK12Q9UKR0 248 aa12.06□□□□□ -0.48
RAB40C-203ENST00000535977 GVQW2A0A096LPI5 108 aaPredicted RBP12.05□□□□□ -0.48
RAB40C-203ENST00000535977 LINC00575Q6W349 94 aa12.05□□□□□ -0.48
RAB40C-203ENST00000535977 C9orf116Q5BN46 136 aaPredicted RBP12.03□□□□□ -0.48
RAB40C-203ENST00000535977 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
RAB40C-203ENST00000535977 NBEAL2Q6ZNJ1 2754 aa12.02□□□□□ -0.49
RAB40C-203ENST00000535977 ESRGQ1W209 222 aa12.01□□□□□ -0.49
RAB40C-203ENST00000535977 BPY2O14599 106 aa12□□□□□ -0.49
RAB40C-203ENST00000535977 VWFP04275 2813 aa11.99□□□□□ -0.49
RAB40C-203ENST00000535977 C10orf25Q5T742 122 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms