RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 DPM2O94777 84 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
TMEM258-203ENST00000535297 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
TMEM258-203ENST00000535297 IGKV2-28A0A075B6P5 120 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 LINC00587B1AMM8 73 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 LEPROTO15243 131 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 IGKV2D-28P01615 120 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 HERVK_113P61574 105 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 MEIG1Q5JSS6 88 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 MAP1LC3CQ9BXW4 147 aa8.29□□□□□ -1.08
TMEM258-203ENST00000535297 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
TMEM258-203ENST00000535297 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
TMEM258-203ENST00000535297 IGKCP01834 107 aa8.28□□□□□ -1.08
TMEM258-203ENST00000535297 SMIM13P0DJ93 91 aa8.28□□□□□ -1.08
TMEM258-203ENST00000535297 Q8NDZ9 215 aa8.28□□□□□ -1.08
TMEM258-203ENST00000535297 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
TMEM258-203ENST00000535297 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
TMEM258-203ENST00000535297 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
TMEM258-203ENST00000535297 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
TMEM258-203ENST00000535297 UBE2AP49459 152 aa8.26□□□□□ -1.09
TMEM258-203ENST00000535297 MIR7-3HGQ8N6C7 128 aa8.26□□□□□ -1.09
TMEM258-203ENST00000535297 J3QQQ9 107 aa8.25□□□□□ -1.09
TMEM258-203ENST00000535297 NMUP48645 174 aa8.25□□□□□ -1.09
TMEM258-203ENST00000535297 TMEM126AQ9H061 195 aa8.25□□□□□ -1.09
TMEM258-203ENST00000535297 SYS1-DBNDD2H3BUS1 97 aa8.24□□□□□ -1.09
TMEM258-203ENST00000535297 M0R378 163 aa8.24□□□□□ -1.09
TMEM258-203ENST00000535297 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
TMEM258-203ENST00000535297 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
TMEM258-203ENST00000535297 TMEM238C9JI98 176 aa8.23□□□□□ -1.09
TMEM258-203ENST00000535297 COA6Q5JTJ3 125 aaKnown RBP8.22□□□□□ -1.09
TMEM258-203ENST00000535297 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
TMEM258-203ENST00000535297 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.09
TMEM258-203ENST00000535297 IGKV2D-26A0A0A0MRZ7 120 aa8.21□□□□□ -1.1
TMEM258-203ENST00000535297 E9PLD3 99 aa8.21□□□□□ -1.1
TMEM258-203ENST00000535297 PRLHP81277 87 aa8.21□□□□□ -1.1
TMEM258-203ENST00000535297 LINC01545Q5VT33 79 aa8.21□□□□□ -1.1
TMEM258-203ENST00000535297 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
TMEM258-203ENST00000535297 PRYO14603 147 aa8.2□□□□□ -1.1
TMEM258-203ENST00000535297 PET117Q6UWS5 81 aa8.2□□□□□ -1.1
TMEM258-203ENST00000535297 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
TMEM258-203ENST00000535297 NCR3O14931 201 aa8.19□□□□□ -1.1
TMEM258-203ENST00000535297 CRYGAP11844 174 aa8.19□□□□□ -1.1
TMEM258-203ENST00000535297 DAND5Q8N907 189 aa8.18□□□□□ -1.1
TMEM258-203ENST00000535297 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
TMEM258-203ENST00000535297 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
TMEM258-203ENST00000535297 A0A087X002 238 aa8.17□□□□□ -1.1
TMEM258-203ENST00000535297 FAM229BQ4G0N7 80 aa8.17□□□□□ -1.1
TMEM258-203ENST00000535297 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
TMEM258-203ENST00000535297 KCNQ1DNQ9H478 68 aa8.17□□□□□ -1.1
TMEM258-203ENST00000535297 A0A0J9YXY3 114 aa8.16□□□□□ -1.1
TMEM258-203ENST00000535297 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
TMEM258-203ENST00000535297 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
TMEM258-203ENST00000535297 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
TMEM258-203ENST00000535297 SPRR1AP35321 89 aa8.15□□□□□ -1.1
TMEM258-203ENST00000535297 S100A12P80511 92 aa8.15□□□□□ -1.1
TMEM258-203ENST00000535297 LINC00337Q8N6G1 96 aa8.15□□□□□ -1.1
TMEM258-203ENST00000535297 SPANXB1Q9NS25 103 aaPredicted RBP8.15□□□□□ -1.1
TMEM258-203ENST00000535297 LRP2P98164 4655 aa8.15□□□□□ -1.11
TMEM258-203ENST00000535297 NDUFC2O95298 119 aa8.14□□□□□ -1.11
TMEM258-203ENST00000535297 KRTDAPP60985 99 aa8.14□□□□□ -1.11
TMEM258-203ENST00000535297 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
TMEM258-203ENST00000535297 HIGD2AQ9BW72 106 aa8.14□□□□□ -1.11
TMEM258-203ENST00000535297 ANAPC11Q9NYG5 84 aa8.14□□□□□ -1.11
TMEM258-203ENST00000535297 S100A1P23297 94 aa8.13□□□□□ -1.11
TMEM258-203ENST00000535297 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
TMEM258-203ENST00000535297 ETDCA0A1B0GVM5 59 aa8.12□□□□□ -1.11
TMEM258-203ENST00000535297 C20orf202A1L168 122 aa8.12□□□□□ -1.11
TMEM258-203ENST00000535297 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
TMEM258-203ENST00000535297 DDTP30046 118 aa8.12□□□□□ -1.11
TMEM258-203ENST00000535297 TIMM17BO60830 172 aa8.11□□□□□ -1.11
TMEM258-203ENST00000535297 ADAMTSL4-AS1Q5T5F5 129 aa8.11□□□□□ -1.11
TMEM258-203ENST00000535297 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
TMEM258-203ENST00000535297 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
TMEM258-203ENST00000535297 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
TMEM258-203ENST00000535297 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
TMEM258-203ENST00000535297 LITAFQ99732 161 aa8.1□□□□□ -1.11
TMEM258-203ENST00000535297 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
TMEM258-203ENST00000535297 AKR1D1P51857 326 aa8.09□□□□□ -1.11
TMEM258-203ENST00000535297 NPC2P61916 151 aa8.09□□□□□ -1.11
TMEM258-203ENST00000535297 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
TMEM258-203ENST00000535297 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
TMEM258-203ENST00000535297 B5MCH6 92 aa8.07□□□□□ -1.12
TMEM258-203ENST00000535297 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
TMEM258-203ENST00000535297 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
TMEM258-203ENST00000535297 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
TMEM258-203ENST00000535297 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
TMEM258-203ENST00000535297 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms