RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 K7EIL1 84 aa7.83□□□□□ -1.16
AMBRA1-211ENST00000533727 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
AMBRA1-211ENST00000533727 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
AMBRA1-211ENST00000533727 C19orf73Q9NVV2 129 aa7.83□□□□□ -1.16
AMBRA1-211ENST00000533727 HECTD1Q9ULT8 2610 aa7.82□□□□□ -1.16
AMBRA1-211ENST00000533727 Q6ZVQ6 151 aa7.82□□□□□ -1.16
AMBRA1-211ENST00000533727 IGLV9-49A0A0B4J1Y8 123 aa7.82□□□□□ -1.16
AMBRA1-211ENST00000533727 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
AMBRA1-211ENST00000533727 C4orf26Q17RF5 130 aa7.81□□□□□ -1.16
AMBRA1-211ENST00000533727 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
AMBRA1-211ENST00000533727 A8MTW9 85 aa7.8□□□□□ -1.16
AMBRA1-211ENST00000533727 Q6ZRU5 148 aa7.8□□□□□ -1.16
AMBRA1-211ENST00000533727 LINC00315P59091 139 aa7.79□□□□□ -1.16
AMBRA1-211ENST00000533727 C9orf116Q5BN46 136 aaPredicted RBP7.79□□□□□ -1.16
AMBRA1-211ENST00000533727 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
AMBRA1-211ENST00000533727 SPINK6Q6UWN8 80 aa7.78□□□□□ -1.16
AMBRA1-211ENST00000533727 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
AMBRA1-211ENST00000533727 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
AMBRA1-211ENST00000533727 C16orf90A8MZG2 172 aa7.78□□□□□ -1.16
AMBRA1-211ENST00000533727 BCE1O60756 84 aa7.77□□□□□ -1.16
AMBRA1-211ENST00000533727 BPTFQ12830 3046 aa7.77□□□□□ -1.16
AMBRA1-211ENST00000533727 CXCL6P80162 114 aa7.77□□□□□ -1.17
AMBRA1-211ENST00000533727 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.17
AMBRA1-211ENST00000533727 DNAH10OSP0CZ25 163 aa7.76□□□□□ -1.17
AMBRA1-211ENST00000533727 KRTAP10-11P60412 298 aa7.76□□□□□ -1.17
AMBRA1-211ENST00000533727 LINC00337Q8N6G1 96 aa7.75□□□□□ -1.17
AMBRA1-211ENST00000533727 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
AMBRA1-211ENST00000533727 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
AMBRA1-211ENST00000533727 LINC01546A6NGU7 62 aa7.75□□□□□ -1.17
AMBRA1-211ENST00000533727 hDV103S1A0JD37 113 aa7.75□□□□□ -1.17
AMBRA1-211ENST00000533727 RTL8CO15255 209 aa7.75□□□□□ -1.17
AMBRA1-211ENST00000533727 CIRBP-AS1Q8TBR5 109 aa7.74□□□□□ -1.17
AMBRA1-211ENST00000533727 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
AMBRA1-211ENST00000533727 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
AMBRA1-211ENST00000533727 H0Y9P7 68 aa7.73□□□□□ -1.17
AMBRA1-211ENST00000533727 KRTAP10-3P60369 221 aa7.73□□□□□ -1.17
AMBRA1-211ENST00000533727 IGLV5-39A0A0G2JS06 123 aa7.73□□□□□ -1.17
AMBRA1-211ENST00000533727 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
AMBRA1-211ENST00000533727 CSNK1G2-AS1Q8NCQ2 148 aa7.72□□□□□ -1.17
AMBRA1-211ENST00000533727 PCOTHQ58A44 107 aa7.72□□□□□ -1.17
AMBRA1-211ENST00000533727 HELZ2Q9BYK8 2649 aaKnown RBP7.72□□□□□ -1.17
AMBRA1-211ENST00000533727 Q9BRP9 147 aa7.71□□□□□ -1.17
AMBRA1-211ENST00000533727 Q6ZRP5 223 aa7.71□□□□□ -1.18
AMBRA1-211ENST00000533727 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
AMBRA1-211ENST00000533727 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
AMBRA1-211ENST00000533727 IGLV5-45A0A087WSX0 123 aa7.69□□□□□ -1.18
AMBRA1-211ENST00000533727 A0A087WSZ3 146 aa7.68□□□□□ -1.18
AMBRA1-211ENST00000533727 SMCR5Q8TEV8 140 aa7.66□□□□□ -1.18
AMBRA1-211ENST00000533727 RANBP2P49792 3224 aaKnown RBP7.66□□□□□ -1.18
AMBRA1-211ENST00000533727 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
AMBRA1-211ENST00000533727 LINC00612Q8N6U2 182 aa7.66□□□□□ -1.18
AMBRA1-211ENST00000533727 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
AMBRA1-211ENST00000533727 MUC4Q99102 2169 aa7.65□□□□□ -1.18
AMBRA1-211ENST00000533727 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.19
AMBRA1-211ENST00000533727 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
AMBRA1-211ENST00000533727 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
AMBRA1-211ENST00000533727 IGHV6-1A0A0B4J1U7 121 aa7.64□□□□□ -1.19
AMBRA1-211ENST00000533727 FAM218AQ96MZ4 157 aa7.64□□□□□ -1.19
AMBRA1-211ENST00000533727 PRLHP81277 87 aa7.63□□□□□ -1.19
AMBRA1-211ENST00000533727 DEFB116Q30KQ4 102 aa7.63□□□□□ -1.19
AMBRA1-211ENST00000533727 WIPF1O43516 503 aa7.62□□□□□ -1.19
AMBRA1-211ENST00000533727 Q9UF83 564 aa7.62□□□□□ -1.19
AMBRA1-211ENST00000533727 A0A0C4DFX4 3053 aa7.62□□□□□ -1.19
AMBRA1-211ENST00000533727 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
AMBRA1-211ENST00000533727 J3QL48 77 aa7.59□□□□□ -1.19
AMBRA1-211ENST00000533727 MKI67P46013 3256 aaKnown RBP7.59□□□□□ -1.19
AMBRA1-211ENST00000533727 GIG44P09565 113 aaPredicted RBP7.59□□□□□ -1.19
AMBRA1-211ENST00000533727 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
AMBRA1-211ENST00000533727 VPREB1P12018 145 aa7.58□□□□□ -1.2
AMBRA1-211ENST00000533727 A0A1B0GW54 56 aa7.58□□□□□ -1.2
AMBRA1-211ENST00000533727 Q6ZQT0 140 aa7.58□□□□□ -1.2
AMBRA1-211ENST00000533727 APLNQ9ULZ1 77 aa7.58□□□□□ -1.2
AMBRA1-211ENST00000533727 HTTP42858 3142 aa7.57□□□□□ -1.2
AMBRA1-211ENST00000533727 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
AMBRA1-211ENST00000533727 Q8NBF4 154 aa7.57□□□□□ -1.2
AMBRA1-211ENST00000533727 PRR34Q9NV39 138 aa7.56□□□□□ -1.2
AMBRA1-211ENST00000533727 A0A1B0GU69 56 aa7.56□□□□□ -1.2
AMBRA1-211ENST00000533727 SPINK1P00995 79 aa7.56□□□□□ -1.2
AMBRA1-211ENST00000533727 KIAA0087Q14695 138 aa7.56□□□□□ -1.2
AMBRA1-211ENST00000533727 TYMSOSQ8TAI1 123 aa7.56□□□□□ -1.2
AMBRA1-211ENST00000533727 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
AMBRA1-211ENST00000533727 A0A087WTM6 91 aa7.55□□□□□ -1.2
AMBRA1-211ENST00000533727 H3BPC8 53 aa7.55□□□□□ -1.2
AMBRA1-211ENST00000533727 PRRC2CQ9Y520 2896 aaKnown RBP7.54□□□□□ -1.2
AMBRA1-211ENST00000533727 FLNAP21333 2647 aaKnown RBP7.54□□□□□ -1.2
AMBRA1-211ENST00000533727 CHD7Q9P2D1 2997 aa7.54□□□□□ -1.2
AMBRA1-211ENST00000533727 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
AMBRA1-211ENST00000533727 LAMA3Q16787 3333 aa7.53□□□□□ -1.2
AMBRA1-211ENST00000533727 Q6ZRX8 168 aa7.53□□□□□ -1.2
AMBRA1-211ENST00000533727 MOBPQ13875 183 aa7.53□□□□□ -1.2
AMBRA1-211ENST00000533727 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
AMBRA1-211ENST00000533727 ELOF1P60002 83 aaKnown RBP7.53□□□□□ -1.2
AMBRA1-211ENST00000533727 BRCA2P51587 3418 aa7.52□□□□□ -1.21
AMBRA1-211ENST00000533727 ITPR3Q14573 2671 aa7.51□□□□□ -1.21
AMBRA1-211ENST00000533727 ERC2-IT1O76042 136 aa7.51□□□□□ -1.21
AMBRA1-211ENST00000533727 EPM2AB3EWF7 344 aa7.51□□□□□ -1.21
AMBRA1-211ENST00000533727 LITAFQ99732 161 aa7.51□□□□□ -1.21
AMBRA1-211ENST00000533727 MGAM2Q2M2H8 2515 aa7.51□□□□□ -1.21
AMBRA1-211ENST00000533727 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
AMBRA1-211ENST00000533727 C9orf163Q8N9P6 203 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms