RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
PHRF1-205ENST00000533464 PRLHP81277 87 aa12.08□□□□□ -0.48
PHRF1-205ENST00000533464 PRO0461Q9UI25 63 aa12.08□□□□□ -0.48
PHRF1-205ENST00000533464 BRCA2P51587 3418 aa12.08□□□□□ -0.48
PHRF1-205ENST00000533464 KRTAP24-1Q3LI83 254 aa12.07□□□□□ -0.48
PHRF1-205ENST00000533464 SPTSSBQ8NFR3 76 aa12.07□□□□□ -0.48
PHRF1-205ENST00000533464 FAM218AQ96MZ4 157 aa12.07□□□□□ -0.48
PHRF1-205ENST00000533464 Q8N9L7 120 aa12.06□□□□□ -0.48
PHRF1-205ENST00000533464 CIRBP-AS1Q8TBR5 109 aa12.05□□□□□ -0.48
PHRF1-205ENST00000533464 LINC01547P58512 204 aaPredicted RBP12.05□□□□□ -0.48
PHRF1-205ENST00000533464 Q8NAQ8 132 aa12.05□□□□□ -0.48
PHRF1-205ENST00000533464 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
PHRF1-205ENST00000533464 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
PHRF1-205ENST00000533464 DEFB116Q30KQ4 102 aa12.04□□□□□ -0.48
PHRF1-205ENST00000533464 H3BNG1 76 aa12.04□□□□□ -0.48
PHRF1-205ENST00000533464 C1orf134Q5TEV5 83 aa12.03□□□□□ -0.48
PHRF1-205ENST00000533464 A0A096LNT2 108 aa12.02□□□□□ -0.49
PHRF1-205ENST00000533464 A0A0C4DFX4 3053 aa12.01□□□□□ -0.49
PHRF1-205ENST00000533464 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
PHRF1-205ENST00000533464 SMCR5Q8TEV8 140 aa12□□□□□ -0.49
PHRF1-205ENST00000533464 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
PHRF1-205ENST00000533464 LINC00167Q96N53 147 aa12□□□□□ -0.49
PHRF1-205ENST00000533464 KIAA0087Q14695 138 aa12□□□□□ -0.49
PHRF1-205ENST00000533464 LAMA2P24043 3122 aaKnown RBP12□□□□□ -0.49
PHRF1-205ENST00000533464 IGHV6-1A0A0B4J1U7 121 aa11.99□□□□□ -0.49
PHRF1-205ENST00000533464 LITAFQ99732 161 aa11.99□□□□□ -0.49
PHRF1-205ENST00000533464 V9GYY9 64 aa11.99□□□□□ -0.49
PHRF1-205ENST00000533464 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
PHRF1-205ENST00000533464 TRANK1O15050 2925 aa11.98□□□□□ -0.49
PHRF1-205ENST00000533464 CFAP54Q96N23 3096 aa11.98□□□□□ -0.49
PHRF1-205ENST00000533464 SPATA3Q8NHX4 192 aa11.98□□□□□ -0.49
PHRF1-205ENST00000533464 MDFIQ99750 246 aa11.97□□□□□ -0.49
PHRF1-205ENST00000533464 CSNK1G2-AS1Q8NCQ2 148 aa11.95□□□□□ -0.5
PHRF1-205ENST00000533464 A0A0U1RQV1 116 aa11.95□□□□□ -0.5
PHRF1-205ENST00000533464 ATRQ13535 2644 aa11.95□□□□□ -0.5
PHRF1-205ENST00000533464 SMIM26A0A096LP01 95 aa11.94□□□□□ -0.5
PHRF1-205ENST00000533464 CXCL6P80162 114 aa11.93□□□□□ -0.5
PHRF1-205ENST00000533464 ITPR3Q14573 2671 aa11.93□□□□□ -0.5
PHRF1-205ENST00000533464 MAST4O15021 2626 aa11.93□□□□□ -0.5
PHRF1-205ENST00000533464 SVIPQ8NHG7 77 aa11.93□□□□□ -0.5
PHRF1-205ENST00000533464 TMEM254Q8TBM7 123 aa11.92□□□□□ -0.5
PHRF1-205ENST00000533464 ELOF1P60002 83 aaKnown RBP11.92□□□□□ -0.5
PHRF1-205ENST00000533464 SERP1Q9Y6X1 66 aa11.91□□□□□ -0.5
PHRF1-205ENST00000533464 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
PHRF1-205ENST00000533464 PRUNE2Q8WUY3 3088 aa11.9□□□□□ -0.5
PHRF1-205ENST00000533464 MGAQ8IWI9 3026 aa11.9□□□□□ -0.5
PHRF1-205ENST00000533464 HCG22E2RYF7 251 aa11.89□□□□□ -0.51
PHRF1-205ENST00000533464 A6NED7 52 aa11.89□□□□□ -0.51
PHRF1-205ENST00000533464 TRBV7-6A0A0J9YX20 115 aa11.88□□□□□ -0.51
PHRF1-205ENST00000533464 PRR15LQ9BU68 103 aa11.88□□□□□ -0.51
PHRF1-205ENST00000533464 HELZ2Q9BYK8 2649 aaKnown RBP11.88□□□□□ -0.51
PHRF1-205ENST00000533464 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
PHRF1-205ENST00000533464 CFAP46Q8IYW2 2715 aa11.87□□□□□ -0.51
PHRF1-205ENST00000533464 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
PHRF1-205ENST00000533464 PCOTHQ58A44 107 aa11.87□□□□□ -0.51
PHRF1-205ENST00000533464 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
PHRF1-205ENST00000533464 H0Y9P7 68 aa11.85□□□□□ -0.51
PHRF1-205ENST00000533464 WDFY4Q6ZS81 3184 aa11.84□□□□□ -0.51
PHRF1-205ENST00000533464 Q6ZRX8 168 aa11.84□□□□□ -0.51
PHRF1-205ENST00000533464 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
PHRF1-205ENST00000533464 GVQW2A0A096LPI5 108 aaPredicted RBP11.84□□□□□ -0.51
PHRF1-205ENST00000533464 Q6ZQT0 140 aa11.84□□□□□ -0.51
PHRF1-205ENST00000533464 Q6ZRP5 223 aa11.83□□□□□ -0.52
PHRF1-205ENST00000533464 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
PHRF1-205ENST00000533464 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
PHRF1-205ENST00000533464 ZNF292O60281 2723 aa11.81□□□□□ -0.52
PHRF1-205ENST00000533464 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
PHRF1-205ENST00000533464 DNAH10OSP0CZ25 163 aa11.8□□□□□ -0.52
PHRF1-205ENST00000533464 VPREB1P12018 145 aa11.8□□□□□ -0.52
PHRF1-205ENST00000533464 NBDYA0A0U1RRE5 68 aa11.79□□□□□ -0.52
PHRF1-205ENST00000533464 KRTAP10-3P60369 221 aa11.79□□□□□ -0.52
PHRF1-205ENST00000533464 ST20-AS1Q8NBB2 130 aa11.79□□□□□ -0.52
PHRF1-205ENST00000533464 LOC110117498A0A087WWA1 95 aa11.79□□□□□ -0.52
PHRF1-205ENST00000533464 IGLV6-57P01721 117 aa11.78□□□□□ -0.52
PHRF1-205ENST00000533464 Q8NBF4 154 aa11.78□□□□□ -0.52
PHRF1-205ENST00000533464 C16orf90A8MZG2 172 aa11.77□□□□□ -0.52
PHRF1-205ENST00000533464 K7ERS5 55 aa11.77□□□□□ -0.52
PHRF1-205ENST00000533464 MOBPQ13875 183 aa11.77□□□□□ -0.53
PHRF1-205ENST00000533464 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
PHRF1-205ENST00000533464 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
PHRF1-205ENST00000533464 CHTF8P0CG12 524 aa11.75□□□□□ -0.53
PHRF1-205ENST00000533464 KRTAP10-11P60412 298 aa11.75□□□□□ -0.53
PHRF1-205ENST00000533464 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
PHRF1-205ENST00000533464 A0A1B0GW54 56 aa11.74□□□□□ -0.53
PHRF1-205ENST00000533464 CRYGAP11844 174 aa11.74□□□□□ -0.53
PHRF1-205ENST00000533464 C1orf64Q8NEQ6 169 aa11.73□□□□□ -0.53
PHRF1-205ENST00000533464 PRR34Q9NV39 138 aa11.73□□□□□ -0.53
PHRF1-205ENST00000533464 XIRP2A4UGR9 3374 aa11.73□□□□□ -0.53
PHRF1-205ENST00000533464 FAM168BA1KXE4 195 aa11.73□□□□□ -0.53
PHRF1-205ENST00000533464 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
PHRF1-205ENST00000533464 hDV103S1A0JD37 113 aa11.72□□□□□ -0.53
PHRF1-205ENST00000533464 SERTAD4-AS1Q5TG53 156 aa11.7□□□□□ -0.54
PHRF1-205ENST00000533464 PSPHP1O15172 72 aa11.7□□□□□ -0.54
PHRF1-205ENST00000533464 RTL8CO15255 209 aa11.7□□□□□ -0.54
PHRF1-205ENST00000533464 LIMD2Q9BT23 127 aa11.7□□□□□ -0.54
PHRF1-205ENST00000533464 BCE1O60756 84 aa11.7□□□□□ -0.54
PHRF1-205ENST00000533464 AKAP13Q12802 2813 aa11.69□□□□□ -0.54
PHRF1-205ENST00000533464 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
PHRF1-205ENST00000533464 TRIOO75962 3097 aa11.68□□□□□ -0.54
PHRF1-205ENST00000533464 K7EIL1 84 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms