RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
SSBP3-214ENST00000533209 S100A2P29034 98 aa7.41□□□□□ -1.22
SSBP3-214ENST00000533209 NMUP48645 174 aa7.41□□□□□ -1.22
SSBP3-214ENST00000533209 PSORS1C2Q9UIG4 136 aa7.41□□□□□ -1.22
SSBP3-214ENST00000533209 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
SSBP3-214ENST00000533209 MEIG1Q5JSS6 88 aa7.4□□□□□ -1.22
SSBP3-214ENST00000533209 TP73-AS1Q9UF72 201 aa7.4□□□□□ -1.22
SSBP3-214ENST00000533209 C5orf52A6NGY3 159 aa7.39□□□□□ -1.23
SSBP3-214ENST00000533209 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
SSBP3-214ENST00000533209 Q8NDZ9 215 aa7.39□□□□□ -1.23
SSBP3-214ENST00000533209 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
SSBP3-214ENST00000533209 IGKV2D-26A0A0A0MRZ7 120 aa7.38□□□□□ -1.23
SSBP3-214ENST00000533209 VPREB1P12018 145 aa7.38□□□□□ -1.23
SSBP3-214ENST00000533209 UBE2BP63146 152 aa7.38□□□□□ -1.23
SSBP3-214ENST00000533209 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-214ENST00000533209 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
SSBP3-214ENST00000533209 MIR7-3HGQ8N6C7 128 aa7.38□□□□□ -1.23
SSBP3-214ENST00000533209 LRP1Q07954 4544 aaKnown RBP7.37□□□□□ -1.23
SSBP3-214ENST00000533209 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
SSBP3-214ENST00000533209 ATOH7Q8N100 152 aa7.37□□□□□ -1.23
SSBP3-214ENST00000533209 LINC00167Q96N53 147 aa7.37□□□□□ -1.23
SSBP3-214ENST00000533209 SRSF9Q13242 221 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSBP3-214ENST00000533209 NKAPP1Q8N9T2 125 aa7.36□□□□□ -1.23
SSBP3-214ENST00000533209 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 AKR1D1P51857 326 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
SSBP3-214ENST00000533209 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 DAND5Q8N907 189 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
SSBP3-214ENST00000533209 RPL37AP8A6NKH3 93 aa7.34□□□□□ -1.23
SSBP3-214ENST00000533209 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 ZNF815PA8K554 130 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
SSBP3-214ENST00000533209 IGLV7-43P04211 117 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 ADAMTSL4-AS1Q5T5F5 129 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 BOD1L2Q8IYS8 172 aa7.33□□□□□ -1.24
SSBP3-214ENST00000533209 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-214ENST00000533209 LITAFQ99732 161 aa7.32□□□□□ -1.24
SSBP3-214ENST00000533209 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
SSBP3-214ENST00000533209 OXTP01178 125 aa7.31□□□□□ -1.24
SSBP3-214ENST00000533209 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
SSBP3-214ENST00000533209 M0R378 163 aa7.3□□□□□ -1.24
SSBP3-214ENST00000533209 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-214ENST00000533209 TIMM17BO60830 172 aa7.3□□□□□ -1.24
SSBP3-214ENST00000533209 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
SSBP3-214ENST00000533209 SOSTDC1Q6X4U4 206 aa7.3□□□□□ -1.24
SSBP3-214ENST00000533209 NCR3O14931 201 aa7.29□□□□□ -1.24
SSBP3-214ENST00000533209 BCE1O60756 84 aa7.29□□□□□ -1.24
SSBP3-214ENST00000533209 SCGB1D1O95968 90 aa7.29□□□□□ -1.24
SSBP3-214ENST00000533209 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
SSBP3-214ENST00000533209 HERC1Q15751 4861 aa7.28□□□□□ -1.24
SSBP3-214ENST00000533209 NPC2P61916 151 aa7.28□□□□□ -1.24
SSBP3-214ENST00000533209 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 TMEM238C9JI98 176 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 J3QL48 77 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 ZNF861PO60384 105 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 LINC00308Q8TCZ7 52 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 DIRC1Q969H9 104 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 TMEM126AQ9H061 195 aa7.27□□□□□ -1.25
SSBP3-214ENST00000533209 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
SSBP3-214ENST00000533209 H0Y9J4 135 aa7.26□□□□□ -1.25
SSBP3-214ENST00000533209 NDUFC2O95298 119 aa7.26□□□□□ -1.25
SSBP3-214ENST00000533209 REG3GQ6UW15 175 aa7.26□□□□□ -1.25
SSBP3-214ENST00000533209 SCGB1D4Q6XE38 83 aa7.26□□□□□ -1.25
SSBP3-214ENST00000533209 TRBV10-2A0A0K0K1G8 114 aa7.25□□□□□ -1.25
SSBP3-214ENST00000533209 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
SSBP3-214ENST00000533209 KRTAP13-1Q8IUC0 172 aa7.25□□□□□ -1.25
SSBP3-214ENST00000533209 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
SSBP3-214ENST00000533209 SPANXB1Q9NS25 103 aaPredicted RBP7.25□□□□□ -1.25
SSBP3-214ENST00000533209 TRBV10-3A0A0K0K1G6 114 aa7.24□□□□□ -1.25
SSBP3-214ENST00000533209 RPL28P46779 137 aaKnown RBP7.24□□□□□ -1.25
SSBP3-214ENST00000533209 SPANXDQ9BXN6 97 aa7.24□□□□□ -1.25
SSBP3-214ENST00000533209 SPANXCQ9NY87 97 aa7.24□□□□□ -1.25
SSBP3-214ENST00000533209 UBE2AP49459 152 aa7.23□□□□□ -1.25
SSBP3-214ENST00000533209 JOSD1Q15040 202 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-214ENST00000533209 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
SSBP3-214ENST00000533209 PRYO14603 147 aa7.22□□□□□ -1.25
SSBP3-214ENST00000533209 DDTP30046 118 aa7.22□□□□□ -1.25
SSBP3-214ENST00000533209 FAM19A1Q7Z5A9 133 aa7.22□□□□□ -1.25
SSBP3-214ENST00000533209 IGLV6-57P01721 117 aa7.21□□□□□ -1.26
SSBP3-214ENST00000533209 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.26
SSBP3-214ENST00000533209 SPRR1AP35321 89 aa7.21□□□□□ -1.26
SSBP3-214ENST00000533209 PRLHP81277 87 aa7.21□□□□□ -1.26
SSBP3-214ENST00000533209 Q6ZVH6 145 aa7.21□□□□□ -1.26
SSBP3-214ENST00000533209 KRTAP4-16G5E9R7 235 aaPredicted RBP7.2□□□□□ -1.26
SSBP3-214ENST00000533209 IFITM1P13164 125 aa7.2□□□□□ -1.26
SSBP3-214ENST00000533209 PPDPFQ9H3Y8 114 aa7.2□□□□□ -1.26
SSBP3-214ENST00000533209 COX8AP10176 69 aa7.19□□□□□ -1.26
SSBP3-214ENST00000533209 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
SSBP3-214ENST00000533209 S100A7L2Q5SY68 101 aa7.19□□□□□ -1.26
SSBP3-214ENST00000533209 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
SSBP3-214ENST00000533209 SPATA45Q537H7 98 aa7.18□□□□□ -1.26
SSBP3-214ENST00000533209 PYY3Q5JQD4 70 aa7.18□□□□□ -1.26
SSBP3-214ENST00000533209 MUSTN1Q8IVN3 82 aa7.18□□□□□ -1.26
SSBP3-214ENST00000533209 PAM16Q9Y3D7 125 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms