RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 LRP2P98164 4655 aa18.09■□□□□ 0.49
SSSCA1-207ENST00000533115 Q8NDZ9 215 aa18.08■□□□□ 0.48
SSSCA1-207ENST00000533115 A0A0U1RRA0 63 aa18.07■□□□□ 0.48
SSSCA1-207ENST00000533115 UBE2AP49459 152 aa18.06■□□□□ 0.48
SSSCA1-207ENST00000533115 KRTAP13-1Q8IUC0 172 aa18.06■□□□□ 0.48
SSSCA1-207ENST00000533115 HSPB8Q9UJY1 196 aa18.06■□□□□ 0.48
SSSCA1-207ENST00000533115 FABP4P15090 132 aa18.04■□□□□ 0.48
SSSCA1-207ENST00000533115 SMIM13P0DJ93 91 aa18.03■□□□□ 0.48
SSSCA1-207ENST00000533115 HERV-K104P63124 156 aa18.03■□□□□ 0.48
SSSCA1-207ENST00000533115 PLNP26678 52 aa18.02■□□□□ 0.48
SSSCA1-207ENST00000533115 MEIG1Q5JSS6 88 aa18.02■□□□□ 0.48
SSSCA1-207ENST00000533115 ATP6V1G1O75348 118 aa18.01■□□□□ 0.47
SSSCA1-207ENST00000533115 TMEM126AQ9H061 195 aa18.01■□□□□ 0.47
SSSCA1-207ENST00000533115 NDUFA12Q9UI09 145 aa18.01■□□□□ 0.47
SSSCA1-207ENST00000533115 MYMXA0A1B0GTQ4 84 aa17.99■□□□□ 0.47
SSSCA1-207ENST00000533115 TMEM238C9JI98 176 aa17.99■□□□□ 0.47
SSSCA1-207ENST00000533115 LINC00587B1AMM8 73 aa17.98■□□□□ 0.47
SSSCA1-207ENST00000533115 LEPROTO15243 131 aa17.97■□□□□ 0.47
SSSCA1-207ENST00000533115 DPM2O94777 84 aa17.97■□□□□ 0.47
SSSCA1-207ENST00000533115 M0R378 163 aa17.96■□□□□ 0.47
SSSCA1-207ENST00000533115 FAM19A1Q7Z5A9 133 aa17.96■□□□□ 0.47
SSSCA1-207ENST00000533115 MIR7-3HGQ8N6C7 128 aa17.96■□□□□ 0.47
SSSCA1-207ENST00000533115 TSPEAR-AS2P59090 65 aa17.95■□□□□ 0.46
SSSCA1-207ENST00000533115 PRLHP81277 87 aa17.95■□□□□ 0.46
SSSCA1-207ENST00000533115 PLEKHB2Q96CS7 222 aa17.95■□□□□ 0.46
SSSCA1-207ENST00000533115 PMCHL2Q9BQD1 86 aa17.95■□□□□ 0.46
SSSCA1-207ENST00000533115 A0A087X002 238 aa17.94■□□□□ 0.46
SSSCA1-207ENST00000533115 IGKCP01834 107 aa17.93■□□□□ 0.46
SSSCA1-207ENST00000533115 CRYGAP11844 174 aa17.93■□□□□ 0.46
SSSCA1-207ENST00000533115 BOD1L2Q8IYS8 172 aa17.93■□□□□ 0.46
SSSCA1-207ENST00000533115 HERVK_113P61574 105 aa17.92■□□□□ 0.46
SSSCA1-207ENST00000533115 MAP1LC3CQ9BXW4 147 aa17.92■□□□□ 0.46
SSSCA1-207ENST00000533115 ANAPC11Q9NYG5 84 aa17.91■□□□□ 0.46
SSSCA1-207ENST00000533115 J3QQQ9 107 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BKO60814 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BJP06899 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BOP23527 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BBP33778 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BDP58876 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BCP62807 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST2H2BEQ16778 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BHQ93079 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BNQ99877 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 HIST1H2BMQ99879 126 aa17.9■□□□□ 0.46
SSSCA1-207ENST00000533115 TYMSOSQ8TAI1 123 aa17.87■□□□□ 0.45
SSSCA1-207ENST00000533115 NMUP48645 174 aa17.86■□□□□ 0.45
SSSCA1-207ENST00000533115 NCR3O14931 201 aa17.85■□□□□ 0.45
SSSCA1-207ENST00000533115 IGKV2D-26A0A0A0MRZ7 120 aa17.84■□□□□ 0.45
SSSCA1-207ENST00000533115 LGALS3P17931 250 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-207ENST00000533115 FAM229BQ4G0N7 80 aa17.84■□□□□ 0.45
SSSCA1-207ENST00000533115 DAND5Q8N907 189 aa17.82■□□□□ 0.44
SSSCA1-207ENST00000533115 PRYO14603 147 aa17.81■□□□□ 0.44
SSSCA1-207ENST00000533115 KRTAP13-2Q52LG2 175 aa17.81■□□□□ 0.44
SSSCA1-207ENST00000533115 LOC107984156A0A0G2JMH3 177 aa17.8■□□□□ 0.44
SSSCA1-207ENST00000533115 SYS1-DBNDD2H3BUS1 97 aa17.8■□□□□ 0.44
SSSCA1-207ENST00000533115 ARL17AQ8IVW1 177 aa17.8■□□□□ 0.44
SSSCA1-207ENST00000533115 LPAP08519 4548 aa17.79■□□□□ 0.44
SSSCA1-207ENST00000533115 HIGD2AQ9BW72 106 aa17.78■□□□□ 0.44
SSSCA1-207ENST00000533115 KCNQ1DNQ9H478 68 aa17.78■□□□□ 0.44
SSSCA1-207ENST00000533115 TSPAN13O95857 204 aa17.77■□□□□ 0.44
SSSCA1-207ENST00000533115 E9PLD3 99 aa17.76■□□□□ 0.43
SSSCA1-207ENST00000533115 TRBV10-3A0A0K0K1G6 114 aa17.75■□□□□ 0.43
SSSCA1-207ENST00000533115 RNF213Q63HN8 5207 aa17.75■□□□□ 0.43
SSSCA1-207ENST00000533115 SPRR1AP35321 89 aa17.74■□□□□ 0.43
SSSCA1-207ENST00000533115 LINC00337Q8N6G1 96 aa17.74■□□□□ 0.43
SSSCA1-207ENST00000533115 PRR4Q16378 134 aa17.73■□□□□ 0.43
SSSCA1-207ENST00000533115 MIEN1Q9BRT3 115 aa17.72■□□□□ 0.43
SSSCA1-207ENST00000533115 LINC01545Q5VT33 79 aa17.71■□□□□ 0.43
SSSCA1-207ENST00000533115 A0A0J9YXY3 114 aa17.7■□□□□ 0.42
SSSCA1-207ENST00000533115 TRBV10-2A0A0K0K1G8 114 aa17.7■□□□□ 0.42
SSSCA1-207ENST00000533115 KRTAP4-16G5E9R7 235 aaPredicted RBP17.7■□□□□ 0.42
SSSCA1-207ENST00000533115 PET117Q6UWS5 81 aa17.7■□□□□ 0.42
SSSCA1-207ENST00000533115 ETDCA0A1B0GVM5 59 aa17.69■□□□□ 0.42
SSSCA1-207ENST00000533115 S100A12P80511 92 aa17.69■□□□□ 0.42
SSSCA1-207ENST00000533115 SPRR4Q96PI1 79 aa17.68■□□□□ 0.42
SSSCA1-207ENST00000533115 SPANXB1Q9NS25 103 aaPredicted RBP17.68■□□□□ 0.42
SSSCA1-207ENST00000533115 DDTP30046 118 aa17.67■□□□□ 0.42
SSSCA1-207ENST00000533115 COA6Q5JTJ3 125 aaKnown RBP17.67■□□□□ 0.42
SSSCA1-207ENST00000533115 NDUFC2O95298 119 aa17.66■□□□□ 0.42
SSSCA1-207ENST00000533115 ADAMTSL4-AS1Q5T5F5 129 aa17.66■□□□□ 0.42
SSSCA1-207ENST00000533115 LINC00304Q8N9R0 145 aa17.66■□□□□ 0.42
SSSCA1-207ENST00000533115 ZNF706Q9Y5V0 76 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-207ENST00000533115 C3orf79P0CE67 100 aa17.64■□□□□ 0.41
SSSCA1-207ENST00000533115 NPC2P61916 151 aa17.63■□□□□ 0.41
SSSCA1-207ENST00000533115 SOSTDC1Q6X4U4 206 aa17.63■□□□□ 0.41
SSSCA1-207ENST00000533115 C3orf22Q8N5N4 141 aa17.62■□□□□ 0.41
SSSCA1-207ENST00000533115 SMCR5Q8TEV8 140 aa17.62■□□□□ 0.41
SSSCA1-207ENST00000533115 B5MCH6 92 aa17.6■□□□□ 0.41
SSSCA1-207ENST00000533115 EIF4EBP3O60516 100 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-207ENST00000533115 S100A7L2Q5SY68 101 aa17.6■□□□□ 0.41
SSSCA1-207ENST00000533115 IGLV6-57P01721 117 aa17.59■□□□□ 0.41
SSSCA1-207ENST00000533115 KRTDAPP60985 99 aa17.58■□□□□ 0.4
SSSCA1-207ENST00000533115 LITAFQ99732 161 aa17.56■□□□□ 0.4
SSSCA1-207ENST00000533115 TIMM17BO60830 172 aa17.55■□□□□ 0.4
SSSCA1-207ENST00000533115 ZNF815PA8K554 130 aa17.54■□□□□ 0.4
SSSCA1-207ENST00000533115 CTAG1AP78358 180 aa17.53■□□□□ 0.4
SSSCA1-207ENST00000533115 TRAV23DV6A0A075B6W5 121 aa17.52■□□□□ 0.4
SSSCA1-207ENST00000533115 LINC00308Q8TCZ7 52 aa17.52■□□□□ 0.4
SSSCA1-207ENST00000533115 PPDPFQ9H3Y8 114 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms