RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 LTN1O94822 1766 aa1.19□□□□□ -2.22
AC055878.1-201ENST00000531858 CPSF4LA6NMK7 179 aaKnown RBP1.19□□□□□ -2.22
AC055878.1-201ENST00000531858 NREPQ16612 68 aa1.19□□□□□ -2.22
AC055878.1-201ENST00000531858 ASXL1Q8IXJ9 1541 aa1.19□□□□□ -2.22
AC055878.1-201ENST00000531858 SCN11AQ9UI33 1791 aa1.19□□□□□ -2.22
AC055878.1-201ENST00000531858 I3L3M4 83 aa1.18□□□□□ -2.22
AC055878.1-201ENST00000531858 COX6B1P14854 86 aa1.18□□□□□ -2.22
AC055878.1-201ENST00000531858 S100ZQ8WXG8 99 aa1.18□□□□□ -2.22
AC055878.1-201ENST00000531858 CRCT1Q9UGL9 99 aa1.18□□□□□ -2.22
AC055878.1-201ENST00000531858 RGPD1P0DJD0 1748 aa1.18□□□□□ -2.22
AC055878.1-201ENST00000531858 CADP27708 2225 aa1.17□□□□□ -2.22
AC055878.1-201ENST00000531858 CACNA1CQ13936 2221 aa1.17□□□□□ -2.22
AC055878.1-201ENST00000531858 INO80Q9ULG1 1556 aaPredicted RBP1.17□□□□□ -2.22
AC055878.1-201ENST00000531858 MROH1Q8NDA8 1641 aa1.17□□□□□ -2.22
AC055878.1-201ENST00000531858 ASXL3Q9C0F0 2248 aa1.17□□□□□ -2.22
AC055878.1-201ENST00000531858 FXYD6-FXYD2A0A087WZ82 144 aa1.16□□□□□ -2.22
AC055878.1-201ENST00000531858 CCL22O00626 93 aa1.16□□□□□ -2.22
AC055878.1-201ENST00000531858 ATXN8Q156A1 80 aa1.16□□□□□ -2.22
AC055878.1-201ENST00000531858 NAV3Q8IVL0 2385 aa1.16□□□□□ -2.22
AC055878.1-201ENST00000531858 LMTK2Q8IWU2 1503 aa1.15□□□□□ -2.22
AC055878.1-201ENST00000531858 BIVM-ERCC5R4GMW8 1640 aa1.15□□□□□ -2.22
AC055878.1-201ENST00000531858 MYO7AQ13402 2215 aa1.15□□□□□ -2.23
AC055878.1-201ENST00000531858 FAM208BQ5VWN6 2430 aa1.15□□□□□ -2.23
AC055878.1-201ENST00000531858 H3BVH4 76 aa1.15□□□□□ -2.23
AC055878.1-201ENST00000531858 CDC42BPGQ6DT37 1551 aa1.15□□□□□ -2.23
AC055878.1-201ENST00000531858 COX6B2Q6YFQ2 88 aa1.14□□□□□ -2.23
AC055878.1-201ENST00000531858 KRTAP4-1Q9BYQ7 146 aa1.14□□□□□ -2.23
AC055878.1-201ENST00000531858 QSER1Q2KHR3 1735 aa1.14□□□□□ -2.23
AC055878.1-201ENST00000531858 EIF2AK4Q9P2K8 1649 aaKnown RBP1.14□□□□□ -2.23
AC055878.1-201ENST00000531858 CICQ96RK0 1608 aaPredicted RBP1.12□□□□□ -2.23
AC055878.1-201ENST00000531858 MRPL34Q9BQ48 92 aaKnown RBP1.12□□□□□ -2.23
AC055878.1-201ENST00000531858 HILPDAQ9Y5L2 63 aa1.12□□□□□ -2.23
AC055878.1-201ENST00000531858 ZNF831Q5JPB2 1677 aa1.12□□□□□ -2.23
AC055878.1-201ENST00000531858 NDUFA4O00483 81 aa1.11□□□□□ -2.23
AC055878.1-201ENST00000531858 POLR1AO95602 1720 aaPredicted RBP1.11□□□□□ -2.23
AC055878.1-201ENST00000531858 RALGAPBQ86X10 1494 aa1.11□□□□□ -2.23
AC055878.1-201ENST00000531858 MADDQ8WXG6 1647 aa1.11□□□□□ -2.23
AC055878.1-201ENST00000531858 GNG13Q9P2W3 67 aa1.1□□□□□ -2.23
AC055878.1-201ENST00000531858 ARFGEF2Q9Y6D5 1785 aa1.1□□□□□ -2.23
AC055878.1-201ENST00000531858 ABCA9Q8IUA7 1624 aa1.1□□□□□ -2.23
AC055878.1-201ENST00000531858 CFAP43Q8NDM7 1665 aa1.1□□□□□ -2.23
AC055878.1-201ENST00000531858 HELZ2Q9BYK8 2649 aaKnown RBP1.09□□□□□ -2.23
AC055878.1-201ENST00000531858 NHSQ6T4R5 1651 aa1.09□□□□□ -2.24
AC055878.1-201ENST00000531858 ANKRD36A6QL64 1941 aa1.09□□□□□ -2.24
AC055878.1-201ENST00000531858 DIP2AQ14689 1571 aa1.08□□□□□ -2.24
AC055878.1-201ENST00000531858 NWD1Q149M9 1564 aa1.08□□□□□ -2.24
AC055878.1-201ENST00000531858 ASH1LQ9NR48 2969 aaKnown RBP1.08□□□□□ -2.24
AC055878.1-201ENST00000531858 SPRR1AP35321 89 aa1.08□□□□□ -2.24
AC055878.1-201ENST00000531858 PREX1Q8TCU6 1659 aa1.07□□□□□ -2.24
AC055878.1-201ENST00000531858 C3orf79P0CE67 100 aa1.07□□□□□ -2.24
AC055878.1-201ENST00000531858 TIAM1Q13009 1591 aa1.06□□□□□ -2.24
AC055878.1-201ENST00000531858 SPRR1BP22528 89 aa1.06□□□□□ -2.24
AC055878.1-201ENST00000531858 PLCH1Q4KWH8 1693 aa1.06□□□□□ -2.24
AC055878.1-201ENST00000531858 UBR3Q6ZT12 1888 aa1.05□□□□□ -2.24
AC055878.1-201ENST00000531858 AHCTF1Q8WYP5 2266 aa1.05□□□□□ -2.24
AC055878.1-201ENST00000531858 MRPL33O75394 65 aaKnown RBP1.05□□□□□ -2.24
AC055878.1-201ENST00000531858 KCNQ1DNQ9H478 68 aa1.05□□□□□ -2.24
AC055878.1-201ENST00000531858 ANKRD17O75179 2603 aaKnown RBP1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 ITSN1Q15811 1721 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 TIAM2Q8IVF5 1701 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 DOT1LQ8TEK3 1739 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 SMIM5Q71RC9 77 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 UBL5Q9BZL1 73 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 GOLGA4Q13439 2230 aaKnown RBP1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 CCDC180Q9P1Z9 1646 aa1.04□□□□□ -2.24
AC055878.1-201ENST00000531858 DEFB131BA0A096LNP1 70 aa1.03□□□□□ -2.24
AC055878.1-201ENST00000531858 SFTA3P0C7M3 94 aa1.03□□□□□ -2.24
AC055878.1-201ENST00000531858 DEFB114Q30KQ6 69 aa1.03□□□□□ -2.24
AC055878.1-201ENST00000531858 ENHOQ6UWT2 76 aa1.03□□□□□ -2.24
AC055878.1-201ENST00000531858 CDKN2A-AS1Q9UH64 79 aa1.03□□□□□ -2.24
AC055878.1-201ENST00000531858 OTOGLQ3ZCN5 2332 aa1.03□□□□□ -2.25
AC055878.1-201ENST00000531858 SPINK4O60575 86 aa1.02□□□□□ -2.25
AC055878.1-201ENST00000531858 WIZO95785 1651 aa1.02□□□□□ -2.25
AC055878.1-201ENST00000531858 BCORQ6W2J9 1755 aa1.02□□□□□ -2.25
AC055878.1-201ENST00000531858 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
AC055878.1-201ENST00000531858 DEFB105AQ8NG35 78 aa1.02□□□□□ -2.25
AC055878.1-201ENST00000531858 PARP4Q9UKK3 1724 aaKnown RBP1.01□□□□□ -2.25
AC055878.1-201ENST00000531858 THOC2Q8NI27 1593 aaKnown RBP1.01□□□□□ -2.25
AC055878.1-201ENST00000531858 FMN2Q9NZ56 1722 aa0.99□□□□□ -2.25
AC055878.1-201ENST00000531858 NESP48681 1621 aa0.99□□□□□ -2.25
AC055878.1-201ENST00000531858 COL14A1Q05707 1796 aaKnown RBP0.98□□□□□ -2.25
AC055878.1-201ENST00000531858 RICTORQ6R327 1708 aa0.98□□□□□ -2.25
AC055878.1-201ENST00000531858 LINC01549A6NIU2 74 aa0.98□□□□□ -2.25
AC055878.1-201ENST00000531858 APLNQ9ULZ1 77 aa0.98□□□□□ -2.25
AC055878.1-201ENST00000531858 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
AC055878.1-201ENST00000531858 ABCC6O95255 1503 aa0.97□□□□□ -2.25
AC055878.1-201ENST00000531858 EEA1Q15075 1411 aa0.97□□□□□ -2.25
AC055878.1-201ENST00000531858 TSC2P49815 1807 aa0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 ABCA10Q8WWZ4 1543 aa0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 ETDCA0A1B0GVM5 59 aa0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 TNRC6CQ9HCJ0 1690 aaKnown RBP0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 TTC28Q96AY4 2481 aa0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 CACNA1HO95180 2353 aa0.96□□□□□ -2.26
AC055878.1-201ENST00000531858 DEFB109BQ30KR1 87 aa0.95□□□□□ -2.26
AC055878.1-201ENST00000531858 MAST1Q9Y2H9 1570 aa0.95□□□□□ -2.26
AC055878.1-201ENST00000531858 RNF17Q9BXT8 1623 aaKnown RBP0.94□□□□□ -2.26
AC055878.1-201ENST00000531858 NDUFA3O95167 84 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms