RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 SYNE2Q8WXH0 6885 aaKnown RBP0.39□□□□□ -2.35
FGFR1-235ENST00000530701 MED14O60244 1454 aa0.39□□□□□ -2.35
FGFR1-235ENST00000530701 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
FGFR1-235ENST00000530701 SPINK4O60575 86 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 NDUFB1O75438 58 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 SPRR1AP35321 89 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 ST20Q9HBF5 79 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 U3KQA8 63 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 AKAP6Q13023 2319 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 TMEM131LA2VDJ0 1609 aa0.38□□□□□ -2.35
FGFR1-235ENST00000530701 ZNF292O60281 2723 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 ATP7BP35670 1465 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 LRRC9Q6ZRR7 1453 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 MAGI2Q86UL8 1455 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 CPSF4LA6NMK7 179 aaKnown RBP0.37□□□□□ -2.35
FGFR1-235ENST00000530701 KRTAP2-3P0C7H8 128 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 TDRG1Q3Y452 100 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 GAFA1Q96PS6 74 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 KRTAP2-4Q9BYR9 128 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 KRTAP2-1Q9BYU5 128 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 RGPD1P0DJD0 1748 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 NCOR1O75376 2440 aa0.37□□□□□ -2.35
FGFR1-235ENST00000530701 POLR1AO95602 1720 aaPredicted RBP0.36□□□□□ -2.35
FGFR1-235ENST00000530701 SPRR1BP22528 89 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 WFDC9Q8NEX5 89 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 DEFB105AQ8NG35 78 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 LRRC7Q96NW7 1537 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 DCAF1Q9Y4B6 1507 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 CLIP1P30622 1438 aa0.36□□□□□ -2.35
FGFR1-235ENST00000530701 ARHGAP35Q9NRY4 1499 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 ZFHX3Q15911 3703 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 SCN11AQ9UI33 1791 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 FSIP2Q5CZC0 6907 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 CHD9Q3L8U1 2897 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 CCL22O00626 93 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 COX7BP24311 80 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 HEPN1Q6WQI6 88 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 APLNQ9ULZ1 77 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 NKTRP30414 1462 aaKnown RBP0.35□□□□□ -2.35
FGFR1-235ENST00000530701 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 PIK3C2BO00750 1634 aa0.35□□□□□ -2.35
FGFR1-235ENST00000530701 ARFGEF2Q9Y6D5 1785 aa0.34□□□□□ -2.35
FGFR1-235ENST00000530701 URB2Q14146 1524 aaKnown RBP0.34□□□□□ -2.35
FGFR1-235ENST00000530701 FCGBPQ9Y6R7 5405 aaPredicted RBP0.34□□□□□ -2.35
FGFR1-235ENST00000530701 ANKRD17O75179 2603 aaKnown RBP0.34□□□□□ -2.36
FGFR1-235ENST00000530701 PIEZO1Q92508 2521 aa0.34□□□□□ -2.36
FGFR1-235ENST00000530701 ERVK-7P63135 1459 aa0.34□□□□□ -2.36
FGFR1-235ENST00000530701 PREX1Q8TCU6 1659 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 SLIT1O75093 1534 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 KDM5DQ9BY66 1539 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 DIP2BQ9P265 1576 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 A0A087WXM4 84 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 TRAV21A0A0B4J279 112 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 H3BUT2 72 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 ATP5EP2Q5VTU8 51 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 MRPL34Q9BQ48 92 aaKnown RBP0.33□□□□□ -2.36
FGFR1-235ENST00000530701 CFAP43Q8NDM7 1665 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 PIEZO2Q9H5I5 2752 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 ABCC1P33527 1531 aa0.33□□□□□ -2.36
FGFR1-235ENST00000530701 TENM3Q9P273 2699 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 OTOGQ6ZRI0 2925 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 PTPN23Q9H3S7 1636 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 LOC730098B7Z3J9 87 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 IFI27P40305 119 aaPredicted RBP0.32□□□□□ -2.36
FGFR1-235ENST00000530701 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 FRAS1Q86XX4 4008 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 DDX60LQ5H9U9 1706 aaKnown RBP0.32□□□□□ -2.36
FGFR1-235ENST00000530701 DOT1LQ8TEK3 1739 aa0.32□□□□□ -2.36
FGFR1-235ENST00000530701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.32□□□□□ -2.36
FGFR1-235ENST00000530701 ZNF469Q96JG9 3925 aaPredicted RBP0.31□□□□□ -2.36
FGFR1-235ENST00000530701 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
FGFR1-235ENST00000530701 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
FGFR1-235ENST00000530701 KRTAP5-10Q6L8G5 202 aa0.31□□□□□ -2.36
FGFR1-235ENST00000530701 CFAP74Q9C0B2 1584 aa0.31□□□□□ -2.36
FGFR1-235ENST00000530701 CNOT1A5YKK6 2376 aaKnown RBP0.31□□□□□ -2.36
FGFR1-235ENST00000530701 MUC16Q8WXI7 14507 aa0.31□□□□□ -2.36
FGFR1-235ENST00000530701 TNRC6CQ9HCJ0 1690 aaKnown RBP0.3□□□□□ -2.36
FGFR1-235ENST00000530701 RRBP1Q9P2E9 1410 aaKnown RBP0.3□□□□□ -2.36
FGFR1-235ENST00000530701 NCOR2Q9Y618 2525 aa0.3□□□□□ -2.36
FGFR1-235ENST00000530701 KLK9Q2XQG4 91 aa0.3□□□□□ -2.36
FGFR1-235ENST00000530701 BVES-AS1Q5T3Y7 98 aa0.3□□□□□ -2.36
FGFR1-235ENST00000530701 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
FGFR1-235ENST00000530701 LRRIQ1Q96JM4 1722 aa0.3□□□□□ -2.36
FGFR1-235ENST00000530701 NCOA2Q15596 1464 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 MAGI3Q5TCQ9 1506 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 NESP48681 1621 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 SMIM13P0DJ93 91 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 HMGA1P17096 107 aaKnown RBP0.29□□□□□ -2.36
FGFR1-235ENST00000530701 H1FX-AS1Q4G0G2 97 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 PLCH1Q4KWH8 1693 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 SPTA1P02549 2419 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 ANKARQ7Z5J8 1434 aa0.29□□□□□ -2.36
FGFR1-235ENST00000530701 VWFP04275 2813 aa0.28□□□□□ -2.36
FGFR1-235ENST00000530701 KMT2DO14686 5537 aa0.28□□□□□ -2.36
FGFR1-235ENST00000530701 NWD1Q149M9 1564 aa0.28□□□□□ -2.36
FGFR1-235ENST00000530701 C4AP0C0L4 1744 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms