RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CCL19Q99731 98 aa9.58□□□□□ -0.88
PCF11-204ENST00000530660 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
PCF11-204ENST00000530660 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
PCF11-204ENST00000530660 MXRA5Q9NR99 2828 aa9.56□□□□□ -0.88
PCF11-204ENST00000530660 FBN2P35556 2912 aa9.56□□□□□ -0.88
PCF11-204ENST00000530660 IGHV4-31P0DP07 118 aa9.56□□□□□ -0.88
PCF11-204ENST00000530660 SONP18583 2426 aaKnown RBP9.56□□□□□ -0.88
PCF11-204ENST00000530660 NBEAL2Q6ZNJ1 2754 aa9.55□□□□□ -0.88
PCF11-204ENST00000530660 ZNF702PQ9H963 129 aa9.55□□□□□ -0.88
PCF11-204ENST00000530660 SMIM29Q86T20 159 aa9.55□□□□□ -0.88
PCF11-204ENST00000530660 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
PCF11-204ENST00000530660 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
PCF11-204ENST00000530660 B4DSR2 109 aa9.54□□□□□ -0.88
PCF11-204ENST00000530660 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
PCF11-204ENST00000530660 PTPN13Q12923 2485 aa9.54□□□□□ -0.88
PCF11-204ENST00000530660 SYCNQ0VAF6 134 aa9.54□□□□□ -0.88
PCF11-204ENST00000530660 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
PCF11-204ENST00000530660 SETXQ7Z333 2677 aaKnown RBP9.53□□□□□ -0.88
PCF11-204ENST00000530660 IGLV10-54A0A075B6I4 117 aa9.53□□□□□ -0.88
PCF11-204ENST00000530660 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
PCF11-204ENST00000530660 STHQ8IWL8 128 aa9.53□□□□□ -0.88
PCF11-204ENST00000530660 MAPK1IP1LQ8NDC0 245 aa9.53□□□□□ -0.88
PCF11-204ENST00000530660 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
PCF11-204ENST00000530660 USP9YO00507 2555 aaPredicted RBP9.53□□□□□ -0.88
PCF11-204ENST00000530660 ZFYVE26Q68DK2 2539 aa9.52□□□□□ -0.89
PCF11-204ENST00000530660 COX7BP24311 80 aa9.52□□□□□ -0.89
PCF11-204ENST00000530660 SETD2Q9BYW2 2564 aaPredicted RBP9.52□□□□□ -0.89
PCF11-204ENST00000530660 COX17Q14061 63 aa9.51□□□□□ -0.89
PCF11-204ENST00000530660 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
PCF11-204ENST00000530660 NCOR2Q9Y618 2525 aa9.49□□□□□ -0.89
PCF11-204ENST00000530660 PSCAO43653 123 aa9.49□□□□□ -0.89
PCF11-204ENST00000530660 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
PCF11-204ENST00000530660 A0A096LPF7 62 aa9.48□□□□□ -0.89
PCF11-204ENST00000530660 UNQ6190/PRO20217Q6UXQ8 127 aa9.48□□□□□ -0.89
PCF11-204ENST00000530660 SPTSSBQ8NFR3 76 aa9.48□□□□□ -0.89
PCF11-204ENST00000530660 UTP20O75691 2785 aaKnown RBP9.48□□□□□ -0.89
PCF11-204ENST00000530660 Q5VV11 94 aa9.47□□□□□ -0.89
PCF11-204ENST00000530660 KTN1-AS1Q86SY8 53 aa9.47□□□□□ -0.89
PCF11-204ENST00000530660 LINC00588Q9Y4M8 146 aa9.47□□□□□ -0.89
PCF11-204ENST00000530660 CHD8Q9HCK8 2581 aa9.46□□□□□ -0.89
PCF11-204ENST00000530660 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
PCF11-204ENST00000530660 USP9XQ93008 2570 aaPredicted RBP9.46□□□□□ -0.9
PCF11-204ENST00000530660 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
PCF11-204ENST00000530660 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
PCF11-204ENST00000530660 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
PCF11-204ENST00000530660 TEX15Q9BXT5 2789 aa9.44□□□□□ -0.9
PCF11-204ENST00000530660 NF1P21359 2839 aa9.44□□□□□ -0.9
PCF11-204ENST00000530660 POLQO75417 2590 aa9.44□□□□□ -0.9
PCF11-204ENST00000530660 CHKB-CPT1BH3BT56 60 aa9.44□□□□□ -0.9
PCF11-204ENST00000530660 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
PCF11-204ENST00000530660 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
PCF11-204ENST00000530660 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
PCF11-204ENST00000530660 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
PCF11-204ENST00000530660 ANKRD17O75179 2603 aaKnown RBP9.43□□□□□ -0.9
PCF11-204ENST00000530660 H3BQ85 93 aa9.43□□□□□ -0.9
PCF11-204ENST00000530660 Q6YL49 198 aa9.43□□□□□ -0.9
PCF11-204ENST00000530660 GCN1Q92616 2671 aaKnown RBP9.43□□□□□ -0.9
PCF11-204ENST00000530660 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
PCF11-204ENST00000530660 ST20-AS1Q8NBB2 130 aa9.43□□□□□ -0.9
PCF11-204ENST00000530660 WFDC10AQ9H1F0 79 aa9.43□□□□□ -0.9
PCF11-204ENST00000530660 LCE6AA0A183 80 aa9.43□□□□□ -0.9
PCF11-204ENST00000530660 UBE2BP63146 152 aa9.43□□□□□ -0.9
PCF11-204ENST00000530660 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
PCF11-204ENST00000530660 CFAP46Q8IYW2 2715 aa9.42□□□□□ -0.9
PCF11-204ENST00000530660 M0R378 163 aa9.42□□□□□ -0.9
PCF11-204ENST00000530660 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
PCF11-204ENST00000530660 SPTBN4Q9H254 2564 aa9.4□□□□□ -0.9
PCF11-204ENST00000530660 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
PCF11-204ENST00000530660 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
PCF11-204ENST00000530660 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
PCF11-204ENST00000530660 GYPEP15421 78 aa9.4□□□□□ -0.9
PCF11-204ENST00000530660 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.9
PCF11-204ENST00000530660 FLNCQ14315 2725 aa9.4□□□□□ -0.91
PCF11-204ENST00000530660 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
PCF11-204ENST00000530660 ESM1Q9NQ30 184 aa9.39□□□□□ -0.91
PCF11-204ENST00000530660 A0A1B0GUV1 79 aa9.39□□□□□ -0.91
PCF11-204ENST00000530660 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
PCF11-204ENST00000530660 CYSRT1A8MQ03 144 aa9.38□□□□□ -0.91
PCF11-204ENST00000530660 CCL24O00175 119 aa9.38□□□□□ -0.91
PCF11-204ENST00000530660 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
PCF11-204ENST00000530660 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
PCF11-204ENST00000530660 CENPEQ02224 2701 aa9.37□□□□□ -0.91
PCF11-204ENST00000530660 HCG22E2RYF7 251 aa9.37□□□□□ -0.91
PCF11-204ENST00000530660 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
PCF11-204ENST00000530660 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
PCF11-204ENST00000530660 ETDCA0A1B0GVM5 59 aa9.36□□□□□ -0.91
PCF11-204ENST00000530660 UBE2AP49459 152 aa9.36□□□□□ -0.91
PCF11-204ENST00000530660 LCA10Q71F78 164 aa9.36□□□□□ -0.91
PCF11-204ENST00000530660 PRR15LQ9BU68 103 aa9.35□□□□□ -0.91
PCF11-204ENST00000530660 REG3AQ06141 175 aa9.35□□□□□ -0.91
PCF11-204ENST00000530660 C4orf48Q5BLP8 95 aa9.34□□□□□ -0.91
PCF11-204ENST00000530660 LRRK2Q5S007 2527 aa9.34□□□□□ -0.91
PCF11-204ENST00000530660 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
PCF11-204ENST00000530660 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
PCF11-204ENST00000530660 NAV2Q8IVL1 2488 aa9.32□□□□□ -0.92
PCF11-204ENST00000530660 FSHBP01225 129 aa9.32□□□□□ -0.92
PCF11-204ENST00000530660 APOC4P55056 127 aa9.32□□□□□ -0.92
PCF11-204ENST00000530660 K7EQZ3 153 aa9.32□□□□□ -0.92
PCF11-204ENST00000530660 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
PCF11-204ENST00000530660 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms