RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RAB5BP61020 215 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 KIAA1644Q3SXP7 199 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 ZC2HC1BQ5TFG8 222 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 ORMDL3Q8N138 153 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 PRELID3AQ96N28 172 aa6.33□□□□□ -1.4
AMBRA1-207ENST00000529553 VPREB1P12018 145 aa6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 COX19Q49B96 90 aa6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 CYSLTR1Q9Y271 337 aa6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
AMBRA1-207ENST00000529553 IGIPA6NJ69 53 aa6.31□□□□□ -1.4
AMBRA1-207ENST00000529553 MRPL18Q9H0U6 180 aaKnown RBP6.31□□□□□ -1.4
AMBRA1-207ENST00000529553 SMCO4Q9NRQ5 59 aa6.31□□□□□ -1.4
AMBRA1-207ENST00000529553 LAMTOR2Q9Y2Q5 125 aa6.31□□□□□ -1.4
AMBRA1-207ENST00000529553 SMIM1B2RUZ4 78 aa6.3□□□□□ -1.4
AMBRA1-207ENST00000529553 COLCA2A8K830 154 aa6.29□□□□□ -1.4
AMBRA1-207ENST00000529553 LINC00483Q53H64 154 aa6.29□□□□□ -1.4
AMBRA1-207ENST00000529553 LOC389332A0A1B0GUA5 103 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 K7EMI3 77 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 FABP9Q0Z7S8 132 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 ORMDL2Q53FV1 153 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 Q8N8P6 123 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 MAP1LC3AQ9H492 121 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
AMBRA1-207ENST00000529553 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
AMBRA1-207ENST00000529553 ATP6V1G1O75348 118 aa6.27□□□□□ -1.41
AMBRA1-207ENST00000529553 ATP5LO75964 103 aa6.27□□□□□ -1.41
AMBRA1-207ENST00000529553 CFC1P0CG37 223 aa6.27□□□□□ -1.41
AMBRA1-207ENST00000529553 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
AMBRA1-207ENST00000529553 IGLV5-45A0A087WSX0 123 aa6.26□□□□□ -1.41
AMBRA1-207ENST00000529553 TINCRA0A1B0GVN0 87 aa6.26□□□□□ -1.41
AMBRA1-207ENST00000529553 G0S2P27469 103 aa6.26□□□□□ -1.41
AMBRA1-207ENST00000529553 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
AMBRA1-207ENST00000529553 SMCR5Q8TEV8 140 aa6.26□□□□□ -1.41
AMBRA1-207ENST00000529553 SND1-IT1Q9HBX3 110 aa6.26□□□□□ -1.41
AMBRA1-207ENST00000529553 PFN2P35080 140 aa6.25□□□□□ -1.41
AMBRA1-207ENST00000529553 COX17Q14061 63 aa6.25□□□□□ -1.41
AMBRA1-207ENST00000529553 TIMM17AQ99595 171 aa6.25□□□□□ -1.41
AMBRA1-207ENST00000529553 NXT2Q9NPJ8 142 aaKnown RBP6.25□□□□□ -1.41
AMBRA1-207ENST00000529553 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
AMBRA1-207ENST00000529553 MOBPQ13875 183 aa6.24□□□□□ -1.41
AMBRA1-207ENST00000529553 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
AMBRA1-207ENST00000529553 TRGC2P03986 189 aa6.23□□□□□ -1.41
AMBRA1-207ENST00000529553 S100A1P23297 94 aa6.23□□□□□ -1.41
AMBRA1-207ENST00000529553 A0A096LNJ9 63 aa6.22□□□□□ -1.41
AMBRA1-207ENST00000529553 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
AMBRA1-207ENST00000529553 Q8NDZ9 215 aa6.22□□□□□ -1.41
AMBRA1-207ENST00000529553 SPRR1AP35321 89 aa6.21□□□□□ -1.42
AMBRA1-207ENST00000529553 LINC00310P59036 64 aa6.21□□□□□ -1.42
AMBRA1-207ENST00000529553 GAGE2AQ6NT46 116 aa6.21□□□□□ -1.42
AMBRA1-207ENST00000529553 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
AMBRA1-207ENST00000529553 PRYO14603 147 aa6.2□□□□□ -1.42
AMBRA1-207ENST00000529553 SPINK8P0C7L1 97 aa6.2□□□□□ -1.42
AMBRA1-207ENST00000529553 ERASQ7Z444 233 aa6.2□□□□□ -1.42
AMBRA1-207ENST00000529553 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
AMBRA1-207ENST00000529553 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-207ENST00000529553 LINC00614P0C842 121 aa6.19□□□□□ -1.42
AMBRA1-207ENST00000529553 FA2HQ7L5A8 372 aa6.19□□□□□ -1.42
AMBRA1-207ENST00000529553 KCNQ1DNQ9H478 68 aa6.19□□□□□ -1.42
AMBRA1-207ENST00000529553 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
AMBRA1-207ENST00000529553 H3BRM9 83 aa6.18□□□□□ -1.42
AMBRA1-207ENST00000529553 ETDCA0A1B0GVM5 59 aa6.17□□□□□ -1.42
AMBRA1-207ENST00000529553 PMCHL1Q16048 86 aa6.17□□□□□ -1.42
AMBRA1-207ENST00000529553 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
AMBRA1-207ENST00000529553 SCGB3A1Q96QR1 104 aa6.17□□□□□ -1.42
AMBRA1-207ENST00000529553 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
AMBRA1-207ENST00000529553 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 LINC01549A6NIU2 74 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 CHCHD1Q96BP2 118 aaKnown RBP6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
AMBRA1-207ENST00000529553 SERF1AO75920 110 aa6.15□□□□□ -1.42
AMBRA1-207ENST00000529553 IGLV6-57P01721 117 aa6.15□□□□□ -1.42
AMBRA1-207ENST00000529553 HBDP02042 147 aa6.15□□□□□ -1.42
AMBRA1-207ENST00000529553 SFTA2Q6UW10 78 aa6.15□□□□□ -1.42
AMBRA1-207ENST00000529553 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
AMBRA1-207ENST00000529553 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
AMBRA1-207ENST00000529553 BAGE3Q86Y29 109 aa6.13□□□□□ -1.43
AMBRA1-207ENST00000529553 B5MCH6 92 aa6.12□□□□□ -1.43
AMBRA1-207ENST00000529553 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
AMBRA1-207ENST00000529553 S100A12P80511 92 aa6.12□□□□□ -1.43
AMBRA1-207ENST00000529553 PMVKQ15126 192 aa6.12□□□□□ -1.43
AMBRA1-207ENST00000529553 ZNF625Q96I27 306 aaPredicted RBP6.12□□□□□ -1.43
AMBRA1-207ENST00000529553 HSBP1O75506 76 aa6.11□□□□□ -1.43
AMBRA1-207ENST00000529553 COA6Q5JTJ3 125 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms