RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.09
CAPN1-209ENST00000527469 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
CAPN1-209ENST00000527469 LINC00587B1AMM8 73 aa8.21□□□□□ -1.1
CAPN1-209ENST00000527469 HERV-K104P63124 156 aa8.21□□□□□ -1.1
CAPN1-209ENST00000527469 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
CAPN1-209ENST00000527469 NDUFA12Q9UI09 145 aa8.21□□□□□ -1.1
CAPN1-209ENST00000527469 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
CAPN1-209ENST00000527469 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
CAPN1-209ENST00000527469 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
CAPN1-209ENST00000527469 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
CAPN1-209ENST00000527469 LEPROTO15243 131 aa8.19□□□□□ -1.1
CAPN1-209ENST00000527469 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
CAPN1-209ENST00000527469 LINC00167Q96N53 147 aa8.19□□□□□ -1.1
CAPN1-209ENST00000527469 J3QQQ9 107 aa8.18□□□□□ -1.1
CAPN1-209ENST00000527469 SMIM13P0DJ93 91 aa8.18□□□□□ -1.1
CAPN1-209ENST00000527469 LINC01600Q96MT4 127 aa8.18□□□□□ -1.1
CAPN1-209ENST00000527469 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
CAPN1-209ENST00000527469 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
CAPN1-209ENST00000527469 H0Y9J4 135 aa8.16□□□□□ -1.1
CAPN1-209ENST00000527469 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
CAPN1-209ENST00000527469 NMUP48645 174 aa8.16□□□□□ -1.1
CAPN1-209ENST00000527469 PET117Q6UWS5 81 aa8.16□□□□□ -1.1
CAPN1-209ENST00000527469 BCE1O60756 84 aa8.15□□□□□ -1.1
CAPN1-209ENST00000527469 VPREB1P12018 145 aa8.15□□□□□ -1.1
CAPN1-209ENST00000527469 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
CAPN1-209ENST00000527469 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
CAPN1-209ENST00000527469 KRTDAPP60985 99 aa8.15□□□□□ -1.1
CAPN1-209ENST00000527469 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
CAPN1-209ENST00000527469 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
CAPN1-209ENST00000527469 C20orf202A1L168 122 aa8.14□□□□□ -1.11
CAPN1-209ENST00000527469 ZNF861PO60384 105 aa8.14□□□□□ -1.11
CAPN1-209ENST00000527469 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
CAPN1-209ENST00000527469 UBE2AP49459 152 aa8.14□□□□□ -1.11
CAPN1-209ENST00000527469 BOD1L2Q8IYS8 172 aa8.14□□□□□ -1.11
CAPN1-209ENST00000527469 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
CAPN1-209ENST00000527469 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
CAPN1-209ENST00000527469 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
CAPN1-209ENST00000527469 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
CAPN1-209ENST00000527469 E9PLD3 99 aa8.11□□□□□ -1.11
CAPN1-209ENST00000527469 M0R378 163 aa8.11□□□□□ -1.11
CAPN1-209ENST00000527469 S100A2P29034 98 aa8.1□□□□□ -1.11
CAPN1-209ENST00000527469 S100A12P80511 92 aa8.1□□□□□ -1.11
CAPN1-209ENST00000527469 DAND5Q8N907 189 aa8.1□□□□□ -1.11
CAPN1-209ENST00000527469 NCR3O14931 201 aa8.09□□□□□ -1.11
CAPN1-209ENST00000527469 S100A6P06703 90 aa8.09□□□□□ -1.11
CAPN1-209ENST00000527469 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
CAPN1-209ENST00000527469 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
CAPN1-209ENST00000527469 TMEM238C9JI98 176 aa8.08□□□□□ -1.12
CAPN1-209ENST00000527469 AKR1D1P51857 326 aa8.08□□□□□ -1.12
CAPN1-209ENST00000527469 Q8NDZ9 215 aa8.08□□□□□ -1.12
CAPN1-209ENST00000527469 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
CAPN1-209ENST00000527469 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
CAPN1-209ENST00000527469 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
CAPN1-209ENST00000527469 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
CAPN1-209ENST00000527469 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
CAPN1-209ENST00000527469 PRLHP81277 87 aa8.06□□□□□ -1.12
CAPN1-209ENST00000527469 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
CAPN1-209ENST00000527469 PRYO14603 147 aa8.04□□□□□ -1.12
CAPN1-209ENST00000527469 NPC2P61916 151 aa8.04□□□□□ -1.12
CAPN1-209ENST00000527469 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
CAPN1-209ENST00000527469 S100A7L2Q5SY68 101 aa8.03□□□□□ -1.12
CAPN1-209ENST00000527469 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
CAPN1-209ENST00000527469 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
CAPN1-209ENST00000527469 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
CAPN1-209ENST00000527469 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
CAPN1-209ENST00000527469 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 ETDCA0A1B0GVM5 59 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 DDTP30046 118 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
CAPN1-209ENST00000527469 TIMM17BO60830 172 aa8.01□□□□□ -1.13
CAPN1-209ENST00000527469 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
CAPN1-209ENST00000527469 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
CAPN1-209ENST00000527469 NDUFC2O95298 119 aa8□□□□□ -1.13
CAPN1-209ENST00000527469 CRYGAP11844 174 aa8□□□□□ -1.13
CAPN1-209ENST00000527469 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
CAPN1-209ENST00000527469 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
CAPN1-209ENST00000527469 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
CAPN1-209ENST00000527469 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
CAPN1-209ENST00000527469 TNXBP22105 4242 aa7.98□□□□□ -1.13
CAPN1-209ENST00000527469 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
CAPN1-209ENST00000527469 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
CAPN1-209ENST00000527469 LINC00308Q8TCZ7 52 aa7.98□□□□□ -1.13
CAPN1-209ENST00000527469 COPS9Q8WXC6 57 aa7.98□□□□□ -1.13
CAPN1-209ENST00000527469 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
CAPN1-209ENST00000527469 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
CAPN1-209ENST00000527469 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
CAPN1-209ENST00000527469 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
CAPN1-209ENST00000527469 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
CAPN1-209ENST00000527469 OR13C6PQ8NH95 151 aa7.96□□□□□ -1.14
CAPN1-209ENST00000527469 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CAPN1-209ENST00000527469 LITAFQ99732 161 aa7.96□□□□□ -1.14
CAPN1-209ENST00000527469 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
CAPN1-209ENST00000527469 TRAV23DV6A0A075B6W5 121 aa7.95□□□□□ -1.14
CAPN1-209ENST00000527469 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
CAPN1-209ENST00000527469 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
CAPN1-209ENST00000527469 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms