RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 BAGE2Q86Y30 109 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 C3orf22Q8N5N4 141 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 LINC00526Q96FQ7 95 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 C8orf17Q9NRJ1 99 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 CSMD3Q7Z407 3707 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 TRAV8-4A0A0B4J246 113 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 A0A0J9YY99 117 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 GRIFINA4D1Z8 144 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 C19orf71A6NCJ1 209 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 C9JCJ5 164 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 M0R2P5 195 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 LY6G6CO95867 125 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 MT-ND6P03923 174 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 SRP19P09132 144 aaKnown RBP2.09□□□□□ -2.07
CD44-219ENST00000525685 CXCL1P09341 107 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 ARMS2P0C7Q2 107 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 MGST1P10620 155 aaKnown RBP2.09□□□□□ -2.07
CD44-219ENST00000525685 CRYGAP11844 174 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 PRR3P79522 188 aaKnown RBP2.09□□□□□ -2.07
CD44-219ENST00000525685 PMCHL1Q16048 86 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 RNASE13Q5GAN3 156 aaKnown RBP2.09□□□□□ -2.07
CD44-219ENST00000525685 SCGB1D4Q6XE38 83 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 PRR15Q8IV56 129 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 C10orf126Q8N4M7 172 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 C15orf53Q8NAA6 179 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 RAB37Q96AX2 223 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 TMEM243Q9BU79 118 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 IL36BQ9NZH7 164 aa2.09□□□□□ -2.07
CD44-219ENST00000525685 A0A096LPF7 62 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 IGHV3-73A0A0B4J1V6 119 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 TRGV4A0A0C4DH28 118 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 A0A1B0GXF2 115 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 C9JQL5 133 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 C8orf87E5RJ46 101 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 H3BNG1 76 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 FABP2P12104 132 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 S100A4P26447 101 aaKnown RBP2.08□□□□□ -2.08
CD44-219ENST00000525685 C9orf153Q5TBE3 101 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 CFAP126Q5VTH2 177 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 UBE2DNLQ8IWF7 75 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 OR10AG1Q8NH19 301 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 EIF5A2Q9GZV4 153 aaKnown RBP2.08□□□□□ -2.08
CD44-219ENST00000525685 RBM12B-AS1Q9P1G2 102 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 PRO0255Q9UI72 69 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 LINC00588Q9Y4M8 146 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 SPCS1Q9Y6A9 102 aa2.08□□□□□ -2.08
CD44-219ENST00000525685 BIRC6Q9NR09 4857 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 DNAH10Q8IVF4 4471 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 TRBV20-1A0A075B6N2 111 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 MUC21A0A0G2JKD1 596 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 TRBV7-6A0A0J9YX20 115 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 MUC21A0A140T8X8 626 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 A0A1W2PPM0 123 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 ZNF727A8MUV8 499 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 A8MWV9 139 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 H3BMG7 143 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 M0R381 172 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 SNCGO76070 127 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 APOMO95445 188 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 RHOHQ15669 191 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 ESRGQ1W209 222 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 KRTAP13-2Q52LG2 175 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 FAM74A4Q5TZK3 123 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 SLC25A29Q8N8R3 303 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 SMIM7Q9BQ49 75 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 PMCHL2Q9BQD1 86 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 C20orf78Q9BR46 151 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 IMUPQ9GZP8 106 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 HHLA3Q9XRX5 114 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 PHLDA3Q9Y5J5 127 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 ICOSQ9Y6W8 199 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 LY96Q9Y6Y9 160 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 MUC4Q99102 2169 aa2.07□□□□□ -2.08
CD44-219ENST00000525685 EPPK1P58107 5090 aaKnown RBP2.06□□□□□ -2.08
CD44-219ENST00000525685 TRAV13-1A0A0B4J241 112 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 TRBV6-4A0A1B0GX49 114 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 TRACP01848 142 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 CCL18P55774 89 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 ZNF56Q15929 161 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 SPANXN1Q5VSR9 72 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 LYPD5Q6UWN5 251 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 LYZL1Q6UWQ5 148 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 WFDC10BQ8IUB3 73 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 C18orf32Q8TCD1 76 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 COPS9Q8WXC6 57 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 UPK3BQ9BT76 320 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 CNFNQ9BYD5 112 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 OSTCQ9NRP0 149 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 STAB2Q8WWQ8 2551 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 DNAH17Q9UFH2 4485 aa2.06□□□□□ -2.08
CD44-219ENST00000525685 KMT2AQ03164 3969 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 FRAS1Q86XX4 4008 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 IGHV3OR16-9A0A0B4J2B5 98 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 IGHV1-58A0A0C4DH39 117 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 TRBV10-1A0A0K0K1A3 114 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 NBDYA0A0U1RRE5 68 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 A8MUU9 505 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 SYS1-DBNDD2H3BUS1 97 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms