RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 PLNP26678 52 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
TSPAN4-215ENST00000525334 RPL28P46779 137 aaKnown RBP11.11□□□□□ -0.63
TSPAN4-215ENST00000525334 PMCHL2Q9BQD1 86 aa11.11□□□□□ -0.63
TSPAN4-215ENST00000525334 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
TSPAN4-215ENST00000525334 DPM2O94777 84 aa11.1□□□□□ -0.63
TSPAN4-215ENST00000525334 SMIM13P0DJ93 91 aa11.1□□□□□ -0.63
TSPAN4-215ENST00000525334 HERV-K104P63124 156 aa11.1□□□□□ -0.63
TSPAN4-215ENST00000525334 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
TSPAN4-215ENST00000525334 IGLV1-50A0A075B6I6 118 aa11.09□□□□□ -0.63
TSPAN4-215ENST00000525334 TSPEAR-AS2P59090 65 aa11.09□□□□□ -0.63
TSPAN4-215ENST00000525334 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
TSPAN4-215ENST00000525334 LEPROTO15243 131 aa11.08□□□□□ -0.64
TSPAN4-215ENST00000525334 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
TSPAN4-215ENST00000525334 ATP6V1G1O75348 118 aa11.07□□□□□ -0.64
TSPAN4-215ENST00000525334 IGKCP01834 107 aa11.07□□□□□ -0.64
TSPAN4-215ENST00000525334 UBE2AP49459 152 aa11.06□□□□□ -0.64
TSPAN4-215ENST00000525334 HERVK_113P61574 105 aa11.06□□□□□ -0.64
TSPAN4-215ENST00000525334 KRTAP13-1Q8IUC0 172 aa11.06□□□□□ -0.64
TSPAN4-215ENST00000525334 MIR7-3HGQ8N6C7 128 aa11.06□□□□□ -0.64
TSPAN4-215ENST00000525334 PLEKHB2Q96CS7 222 aa11.06□□□□□ -0.64
TSPAN4-215ENST00000525334 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
TSPAN4-215ENST00000525334 LINC00587B1AMM8 73 aa11.04□□□□□ -0.64
TSPAN4-215ENST00000525334 J3QQQ9 107 aa11.04□□□□□ -0.64
TSPAN4-215ENST00000525334 TMEM126AQ9H061 195 aa11.04□□□□□ -0.64
TSPAN4-215ENST00000525334 BOD1L2Q8IYS8 172 aa11.03□□□□□ -0.64
TSPAN4-215ENST00000525334 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
TSPAN4-215ENST00000525334 M0R378 163 aa11.02□□□□□ -0.65
TSPAN4-215ENST00000525334 RPL13AP40429 203 aaKnown RBP11.02□□□□□ -0.65
TSPAN4-215ENST00000525334 PRLHP81277 87 aa11.02□□□□□ -0.65
TSPAN4-215ENST00000525334 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-215ENST00000525334 FAM19A1Q7Z5A9 133 aa11.01□□□□□ -0.65
TSPAN4-215ENST00000525334 NMUP48645 174 aa11□□□□□ -0.65
TSPAN4-215ENST00000525334 LRP2P98164 4655 aa11□□□□□ -0.65
TSPAN4-215ENST00000525334 NCR3O14931 201 aa10.99□□□□□ -0.65
TSPAN4-215ENST00000525334 DAND5Q8N907 189 aa10.99□□□□□ -0.65
TSPAN4-215ENST00000525334 A0A087X002 238 aa10.97□□□□□ -0.65
TSPAN4-215ENST00000525334 E9PLD3 99 aa10.97□□□□□ -0.65
TSPAN4-215ENST00000525334 COA6Q5JTJ3 125 aaKnown RBP10.97□□□□□ -0.65
TSPAN4-215ENST00000525334 LINC01545Q5VT33 79 aa10.97□□□□□ -0.65
TSPAN4-215ENST00000525334 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
TSPAN4-215ENST00000525334 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
TSPAN4-215ENST00000525334 ANAPC11Q9NYG5 84 aa10.96□□□□□ -0.65
TSPAN4-215ENST00000525334 CRYGAP11844 174 aa10.95□□□□□ -0.66
TSPAN4-215ENST00000525334 LOC107984156A0A0G2JMH3 177 aa10.94□□□□□ -0.66
TSPAN4-215ENST00000525334 ARL17AQ8IVW1 177 aa10.94□□□□□ -0.66
TSPAN4-215ENST00000525334 PRYO14603 147 aa10.93□□□□□ -0.66
TSPAN4-215ENST00000525334 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
TSPAN4-215ENST00000525334 A0A0J9YXY3 114 aa10.92□□□□□ -0.66
TSPAN4-215ENST00000525334 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
TSPAN4-215ENST00000525334 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
TSPAN4-215ENST00000525334 HIGD2AQ9BW72 106 aa10.91□□□□□ -0.66
TSPAN4-215ENST00000525334 KCNQ1DNQ9H478 68 aa10.91□□□□□ -0.66
TSPAN4-215ENST00000525334 SPRR1AP35321 89 aa10.9□□□□□ -0.66
TSPAN4-215ENST00000525334 KRTDAPP60985 99 aa10.9□□□□□ -0.66
TSPAN4-215ENST00000525334 FAM229BQ4G0N7 80 aa10.9□□□□□ -0.66
TSPAN4-215ENST00000525334 TYMSOSQ8TAI1 123 aa10.9□□□□□ -0.66
TSPAN4-215ENST00000525334 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
TSPAN4-215ENST00000525334 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
TSPAN4-215ENST00000525334 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
TSPAN4-215ENST00000525334 NPC2P61916 151 aa10.88□□□□□ -0.67
TSPAN4-215ENST00000525334 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
TSPAN4-215ENST00000525334 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
TSPAN4-215ENST00000525334 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
TSPAN4-215ENST00000525334 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
TSPAN4-215ENST00000525334 EIF4EBP3O60516 100 aaPredicted RBP10.87□□□□□ -0.67
TSPAN4-215ENST00000525334 DDTP30046 118 aa10.87□□□□□ -0.67
TSPAN4-215ENST00000525334 NDUFC2O95298 119 aa10.86□□□□□ -0.67
TSPAN4-215ENST00000525334 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
TSPAN4-215ENST00000525334 S100A1P23297 94 aa10.85□□□□□ -0.67
TSPAN4-215ENST00000525334 S100A12P80511 92 aa10.85□□□□□ -0.67
TSPAN4-215ENST00000525334 LITAFQ99732 161 aa10.85□□□□□ -0.67
TSPAN4-215ENST00000525334 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
TSPAN4-215ENST00000525334 TTTY13Q9BZ97 58 aa10.84□□□□□ -0.67
TSPAN4-215ENST00000525334 LPAP08519 4548 aa10.84□□□□□ -0.67
TSPAN4-215ENST00000525334 C20orf202A1L168 122 aa10.83□□□□□ -0.68
TSPAN4-215ENST00000525334 TSPAN13O95857 204 aa10.83□□□□□ -0.68
TSPAN4-215ENST00000525334 SPRR4Q96PI1 79 aa10.83□□□□□ -0.68
TSPAN4-215ENST00000525334 TIMM17BO60830 172 aa10.82□□□□□ -0.68
TSPAN4-215ENST00000525334 IGLV6-57P01721 117 aa10.82□□□□□ -0.68
TSPAN4-215ENST00000525334 S100A7L2Q5SY68 101 aa10.82□□□□□ -0.68
TSPAN4-215ENST00000525334 B5MCH6 92 aa10.81□□□□□ -0.68
TSPAN4-215ENST00000525334 LINC00308Q8TCZ7 52 aa10.81□□□□□ -0.68
TSPAN4-215ENST00000525334 SMCR5Q8TEV8 140 aa10.81□□□□□ -0.68
TSPAN4-215ENST00000525334 ZNF706Q9Y5V0 76 aaPredicted RBP10.81□□□□□ -0.68
TSPAN4-215ENST00000525334 ANKRD39Q53RE8 183 aa10.79□□□□□ -0.68
TSPAN4-215ENST00000525334 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
TSPAN4-215ENST00000525334 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
TSPAN4-215ENST00000525334 TRAV23DV6A0A075B6W5 121 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms