RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MAP1LC3AQ9H492 121 aa5.18□□□□□ -1.58
PTPN12-216ENST00000523952 SMIM27A0A1W2PRY6 76 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 ATP5LO75964 103 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 NPSP0C0P6 89 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 PFN2P35080 140 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
PTPN12-216ENST00000523952 ORMDL2Q53FV1 153 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 PDZD11Q5EBL8 140 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 FAM19A3Q7Z5A8 133 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 BATF3Q9NR55 127 aa5.17□□□□□ -1.58
PTPN12-216ENST00000523952 IGLV8-61A0A075B6I0 122 aa5.16□□□□□ -1.58
PTPN12-216ENST00000523952 M0R378 163 aa5.16□□□□□ -1.58
PTPN12-216ENST00000523952 SLC25A20O43772 301 aa5.16□□□□□ -1.58
PTPN12-216ENST00000523952 RAB14P61106 215 aa5.16□□□□□ -1.58
PTPN12-216ENST00000523952 AKAP14Q86UN6 197 aa5.16□□□□□ -1.58
PTPN12-216ENST00000523952 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
PTPN12-216ENST00000523952 G0S2P27469 103 aa5.15□□□□□ -1.59
PTPN12-216ENST00000523952 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
PTPN12-216ENST00000523952 Q8N8P6 123 aa5.15□□□□□ -1.59
PTPN12-216ENST00000523952 B5MCH6 92 aa5.14□□□□□ -1.59
PTPN12-216ENST00000523952 VPREB1P12018 145 aa5.14□□□□□ -1.59
PTPN12-216ENST00000523952 RPL23P62829 140 aaKnown RBP5.14□□□□□ -1.59
PTPN12-216ENST00000523952 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
PTPN12-216ENST00000523952 Q8N377 158 aa5.14□□□□□ -1.59
PTPN12-216ENST00000523952 LAMTOR2Q9Y2Q5 125 aa5.14□□□□□ -1.59
PTPN12-216ENST00000523952 IGLV9-49A0A0B4J1Y8 123 aa5.13□□□□□ -1.59
PTPN12-216ENST00000523952 IGIPA6NJ69 53 aa5.13□□□□□ -1.59
PTPN12-216ENST00000523952 SRP19P09132 144 aaKnown RBP5.13□□□□□ -1.59
PTPN12-216ENST00000523952 SPINK8P0C7L1 97 aa5.13□□□□□ -1.59
PTPN12-216ENST00000523952 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
PTPN12-216ENST00000523952 ALKAL2Q6UX46 152 aa5.13□□□□□ -1.59
PTPN12-216ENST00000523952 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
PTPN12-216ENST00000523952 K7EMI3 77 aa5.12□□□□□ -1.59
PTPN12-216ENST00000523952 PCP4P48539 62 aa5.12□□□□□ -1.59
PTPN12-216ENST00000523952 MOBPQ13875 183 aa5.12□□□□□ -1.59
PTPN12-216ENST00000523952 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
PTPN12-216ENST00000523952 NAT8Q9UHE5 227 aa5.12□□□□□ -1.59
PTPN12-216ENST00000523952 TINCRA0A1B0GVN0 87 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 A0A1B0GXF2 115 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 H3BRM9 83 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 ATP5L2Q7Z4Y8 100 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 TIMM17AQ99595 171 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 ERG28Q9UKR5 140 aa5.11□□□□□ -1.59
PTPN12-216ENST00000523952 ETDCA0A1B0GVM5 59 aa5.1□□□□□ -1.59
PTPN12-216ENST00000523952 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
PTPN12-216ENST00000523952 SMCR5Q8TEV8 140 aa5.1□□□□□ -1.59
PTPN12-216ENST00000523952 SCGB3A1Q96QR1 104 aa5.1□□□□□ -1.59
PTPN12-216ENST00000523952 NXT2Q9NPJ8 142 aaKnown RBP5.1□□□□□ -1.59
PTPN12-216ENST00000523952 A4D1N5 150 aa5.09□□□□□ -1.59
PTPN12-216ENST00000523952 COX17Q14061 63 aa5.09□□□□□ -1.59
PTPN12-216ENST00000523952 C9orf92A6NGG3 77 aa5.08□□□□□ -1.6
PTPN12-216ENST00000523952 PRYO14603 147 aa5.08□□□□□ -1.6
PTPN12-216ENST00000523952 S100A12P80511 92 aa5.08□□□□□ -1.6
PTPN12-216ENST00000523952 C9orf153Q5TBE3 101 aa5.08□□□□□ -1.6
PTPN12-216ENST00000523952 ERASQ7Z444 233 aa5.08□□□□□ -1.6
PTPN12-216ENST00000523952 TOMM6Q96B49 74 aa5.08□□□□□ -1.6
PTPN12-216ENST00000523952 ZNF625Q96I27 306 aaPredicted RBP5.08□□□□□ -1.6
PTPN12-216ENST00000523952 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
PTPN12-216ENST00000523952 ATP6V1G1O75348 118 aa5.06□□□□□ -1.6
PTPN12-216ENST00000523952 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
PTPN12-216ENST00000523952 TCTE3Q8IZS6 198 aa5.06□□□□□ -1.6
PTPN12-216ENST00000523952 LINC00158P58513 81 aa5.05□□□□□ -1.6
PTPN12-216ENST00000523952 PMVKQ15126 192 aa5.05□□□□□ -1.6
PTPN12-216ENST00000523952 CST9LQ9H4G1 147 aa5.05□□□□□ -1.6
PTPN12-216ENST00000523952 LINC01549A6NIU2 74 aa5.04□□□□□ -1.6
PTPN12-216ENST00000523952 PEA15Q15121 130 aa5.04□□□□□ -1.6
PTPN12-216ENST00000523952 SFTA2Q6UW10 78 aa5.04□□□□□ -1.6
PTPN12-216ENST00000523952 Q8NDZ9 215 aa5.04□□□□□ -1.6
PTPN12-216ENST00000523952 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
PTPN12-216ENST00000523952 NCR3O14931 201 aa5.03□□□□□ -1.6
PTPN12-216ENST00000523952 ADCYAP1P18509 176 aa5.03□□□□□ -1.6
PTPN12-216ENST00000523952 NDUFA6P56556 154 aa5.03□□□□□ -1.6
PTPN12-216ENST00000523952 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
PTPN12-216ENST00000523952 IGLV6-57P01721 117 aa5.02□□□□□ -1.61
PTPN12-216ENST00000523952 TRAV9-1A0A075B6T8 112 aa5.01□□□□□ -1.61
PTPN12-216ENST00000523952 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
PTPN12-216ENST00000523952 BOD1L2Q8IYS8 172 aa5.01□□□□□ -1.61
PTPN12-216ENST00000523952 KCNQ1DNQ9H478 68 aa5.01□□□□□ -1.61
PTPN12-216ENST00000523952 TRIAP1O43715 76 aa5□□□□□ -1.61
PTPN12-216ENST00000523952 CFC1P0CG37 223 aa5□□□□□ -1.61
PTPN12-216ENST00000523952 SPRR1AP35321 89 aa5□□□□□ -1.61
PTPN12-216ENST00000523952 Q6Q795 121 aa5□□□□□ -1.61
PTPN12-216ENST00000523952 HRCT1Q6UXD1 115 aa5□□□□□ -1.61
PTPN12-216ENST00000523952 SMCO4Q9NRQ5 59 aa5□□□□□ -1.61
PTPN12-216ENST00000523952 TRBV10-3A0A0K0K1G6 114 aa4.99□□□□□ -1.61
PTPN12-216ENST00000523952 C9JQL5 133 aa4.99□□□□□ -1.61
PTPN12-216ENST00000523952 IGLC3P0DOY3 106 aa4.99□□□□□ -1.61
PTPN12-216ENST00000523952 KRTAP4-16G5E9R7 235 aaPredicted RBP4.98□□□□□ -1.61
PTPN12-216ENST00000523952 ERC2-IT1O76042 136 aa4.98□□□□□ -1.61
PTPN12-216ENST00000523952 ZNF22P17026 224 aaPredicted RBP4.98□□□□□ -1.61
PTPN12-216ENST00000523952 KIAA1644Q3SXP7 199 aa4.98□□□□□ -1.61
PTPN12-216ENST00000523952 MEIG1Q5JSS6 88 aa4.98□□□□□ -1.61
PTPN12-216ENST00000523952 TMEM170BQ5T4T1 132 aa4.98□□□□□ -1.61
PTPN12-216ENST00000523952 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
PTPN12-216ENST00000523952 MT-ND4LP03901 98 aa4.97□□□□□ -1.61
PTPN12-216ENST00000523952 FA2HQ7L5A8 372 aa4.97□□□□□ -1.61
PTPN12-216ENST00000523952 JOSD1Q15040 202 aaPredicted RBP4.96□□□□□ -1.62
PTPN12-216ENST00000523952 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms