RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
VEGFA-225ENST00000523950 C2orf82Q6UX34 121 aa7.93□□□□□ -1.14
VEGFA-225ENST00000523950 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
VEGFA-225ENST00000523950 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
VEGFA-225ENST00000523950 PCLOQ9Y6V0 5065 aa7.93□□□□□ -1.14
VEGFA-225ENST00000523950 FAT1Q14517 4588 aa7.92□□□□□ -1.14
VEGFA-225ENST00000523950 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
VEGFA-225ENST00000523950 SPINK8P0C7L1 97 aa7.92□□□□□ -1.14
VEGFA-225ENST00000523950 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
VEGFA-225ENST00000523950 C7orf33Q8WU49 177 aa7.92□□□□□ -1.14
VEGFA-225ENST00000523950 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 A6NJY4 79 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 Q6ZRP5 223 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 CEND1Q8N111 149 aa7.91□□□□□ -1.14
VEGFA-225ENST00000523950 IGKV2D-26A0A0A0MRZ7 120 aa7.9□□□□□ -1.14
VEGFA-225ENST00000523950 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.14
VEGFA-225ENST00000523950 C11orf86A6NJI1 115 aa7.9□□□□□ -1.14
VEGFA-225ENST00000523950 K7EP34 96 aa7.9□□□□□ -1.14
VEGFA-225ENST00000523950 FABP2P12104 132 aa7.9□□□□□ -1.14
VEGFA-225ENST00000523950 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
VEGFA-225ENST00000523950 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
VEGFA-225ENST00000523950 C9orf116Q5BN46 136 aaPredicted RBP7.89□□□□□ -1.15
VEGFA-225ENST00000523950 SFTA2Q6UW10 78 aa7.89□□□□□ -1.15
VEGFA-225ENST00000523950 TP73-AS1Q9UF72 201 aa7.89□□□□□ -1.15
VEGFA-225ENST00000523950 A0A1W2PPM0 123 aa7.88□□□□□ -1.15
VEGFA-225ENST00000523950 K7ERU9 68 aa7.88□□□□□ -1.15
VEGFA-225ENST00000523950 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
VEGFA-225ENST00000523950 A0A1W2PNN7 141 aa7.87□□□□□ -1.15
VEGFA-225ENST00000523950 GAGE2EQ4V326 116 aa7.87□□□□□ -1.15
VEGFA-225ENST00000523950 GAGE2DQ9UEU5 116 aa7.87□□□□□ -1.15
VEGFA-225ENST00000523950 H3BUT2 72 aa7.86□□□□□ -1.15
VEGFA-225ENST00000523950 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
VEGFA-225ENST00000523950 Q6ZVH6 145 aa7.86□□□□□ -1.15
VEGFA-225ENST00000523950 HIST1H4GQ99525 98 aa7.86□□□□□ -1.15
VEGFA-225ENST00000523950 SPANXB1Q9NS25 103 aaPredicted RBP7.86□□□□□ -1.15
VEGFA-225ENST00000523950 TMEM223A0PJW6 202 aa7.85□□□□□ -1.15
VEGFA-225ENST00000523950 SPCS1Q9Y6A9 102 aa7.85□□□□□ -1.15
VEGFA-225ENST00000523950 FXYD2P54710 66 aa7.84□□□□□ -1.15
VEGFA-225ENST00000523950 OCIAD2Q56VL3 154 aa7.84□□□□□ -1.15
VEGFA-225ENST00000523950 ZNF815PA8K554 130 aa7.83□□□□□ -1.16
VEGFA-225ENST00000523950 PRR3P79522 188 aaKnown RBP7.83□□□□□ -1.16
VEGFA-225ENST00000523950 COX17Q14061 63 aa7.83□□□□□ -1.16
VEGFA-225ENST00000523950 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
VEGFA-225ENST00000523950 PLEKHB2Q96CS7 222 aa7.83□□□□□ -1.16
VEGFA-225ENST00000523950 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
VEGFA-225ENST00000523950 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
VEGFA-225ENST00000523950 NHP2Q9NX24 153 aaKnown RBP7.82□□□□□ -1.16
VEGFA-225ENST00000523950 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
VEGFA-225ENST00000523950 F8W1H4 67 aa7.81□□□□□ -1.16
VEGFA-225ENST00000523950 LEPROTO15243 131 aa7.81□□□□□ -1.16
VEGFA-225ENST00000523950 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
VEGFA-225ENST00000523950 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
VEGFA-225ENST00000523950 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
VEGFA-225ENST00000523950 M0QXV9 152 aa7.8□□□□□ -1.16
VEGFA-225ENST00000523950 LGALS3P17931 250 aaKnown RBP7.8□□□□□ -1.16
VEGFA-225ENST00000523950 RAB37Q96AX2 223 aa7.8□□□□□ -1.16
VEGFA-225ENST00000523950 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
VEGFA-225ENST00000523950 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
VEGFA-225ENST00000523950 PKHD1L1Q86WI1 4243 aa7.8□□□□□ -1.16
VEGFA-225ENST00000523950 J3QR89 54 aa7.79□□□□□ -1.16
VEGFA-225ENST00000523950 HERV-K104P63124 156 aa7.79□□□□□ -1.16
VEGFA-225ENST00000523950 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
VEGFA-225ENST00000523950 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
VEGFA-225ENST00000523950 TTTY13Q9BZ97 58 aa7.79□□□□□ -1.16
VEGFA-225ENST00000523950 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
VEGFA-225ENST00000523950 KRTAP29-1A8MX34 341 aaPredicted RBP7.78□□□□□ -1.16
VEGFA-225ENST00000523950 J3QQQ9 107 aa7.78□□□□□ -1.16
VEGFA-225ENST00000523950 PFN2P35080 140 aa7.78□□□□□ -1.16
VEGFA-225ENST00000523950 TMEM238C9JI98 176 aa7.77□□□□□ -1.17
VEGFA-225ENST00000523950 OXTP01178 125 aa7.77□□□□□ -1.17
VEGFA-225ENST00000523950 UBE2BP63146 152 aa7.77□□□□□ -1.17
VEGFA-225ENST00000523950 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
VEGFA-225ENST00000523950 PSORS1C2Q9UIG4 136 aa7.77□□□□□ -1.17
VEGFA-225ENST00000523950 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
VEGFA-225ENST00000523950 TRBV20-1A0A075B6N2 111 aa7.76□□□□□ -1.17
VEGFA-225ENST00000523950 SPINK6Q6UWN8 80 aa7.76□□□□□ -1.17
VEGFA-225ENST00000523950 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
VEGFA-225ENST00000523950 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
VEGFA-225ENST00000523950 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
VEGFA-225ENST00000523950 SND1-IT1Q9HBX3 110 aa7.75□□□□□ -1.17
VEGFA-225ENST00000523950 NDUFA12Q9UI09 145 aa7.75□□□□□ -1.17
VEGFA-225ENST00000523950 LINC00158P58513 81 aa7.74□□□□□ -1.17
VEGFA-225ENST00000523950 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
VEGFA-225ENST00000523950 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
VEGFA-225ENST00000523950 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
VEGFA-225ENST00000523950 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
VEGFA-225ENST00000523950 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
VEGFA-225ENST00000523950 K7ERJ3 54 aa7.73□□□□□ -1.17
VEGFA-225ENST00000523950 TIMM17BO60830 172 aa7.73□□□□□ -1.17
VEGFA-225ENST00000523950 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
VEGFA-225ENST00000523950 COPS9Q8WXC6 57 aa7.73□□□□□ -1.17
VEGFA-225ENST00000523950 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
VEGFA-225ENST00000523950 J3QL48 77 aa7.72□□□□□ -1.17
VEGFA-225ENST00000523950 TSPEAR-AS2P59090 65 aa7.72□□□□□ -1.17
VEGFA-225ENST00000523950 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
VEGFA-225ENST00000523950 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
VEGFA-225ENST00000523950 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms