RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 MRPL55Q7Z7F7 128 aaKnown RBP10□□□□□ -0.81
TNPO1-212ENST00000520850 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
TNPO1-212ENST00000520850 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
TNPO1-212ENST00000520850 UBE2BP63146 152 aa9.99□□□□□ -0.81
TNPO1-212ENST00000520850 LINC01545Q5VT33 79 aa9.99□□□□□ -0.81
TNPO1-212ENST00000520850 KRTAP11-1Q8IUC1 163 aa9.99□□□□□ -0.81
TNPO1-212ENST00000520850 NDUFA12Q9UI09 145 aa9.99□□□□□ -0.81
TNPO1-212ENST00000520850 DMBT1Q9UGM3 2413 aaPredicted RBP9.99□□□□□ -0.81
TNPO1-212ENST00000520850 IGLV7-43P04211 117 aa9.98□□□□□ -0.81
TNPO1-212ENST00000520850 NMUP48645 174 aa9.98□□□□□ -0.81
TNPO1-212ENST00000520850 RPL24P83731 157 aaKnown RBP9.97□□□□□ -0.81
TNPO1-212ENST00000520850 REG3GQ6UW15 175 aa9.97□□□□□ -0.81
TNPO1-212ENST00000520850 J3QQQ9 107 aa9.96□□□□□ -0.82
TNPO1-212ENST00000520850 LINC00158P58513 81 aa9.96□□□□□ -0.82
TNPO1-212ENST00000520850 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
TNPO1-212ENST00000520850 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
TNPO1-212ENST00000520850 PMCHL2Q9BQD1 86 aa9.96□□□□□ -0.82
TNPO1-212ENST00000520850 HERC1Q15751 4861 aa9.96□□□□□ -0.82
TNPO1-212ENST00000520850 E9PLD3 99 aa9.95□□□□□ -0.82
TNPO1-212ENST00000520850 VPREB1P12018 145 aa9.95□□□□□ -0.82
TNPO1-212ENST00000520850 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
TNPO1-212ENST00000520850 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
TNPO1-212ENST00000520850 C3orf79P0CE67 100 aa9.94□□□□□ -0.82
TNPO1-212ENST00000520850 AKR1D1P51857 326 aa9.94□□□□□ -0.82
TNPO1-212ENST00000520850 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
TNPO1-212ENST00000520850 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
TNPO1-212ENST00000520850 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
TNPO1-212ENST00000520850 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
TNPO1-212ENST00000520850 LGALS3P17931 250 aaKnown RBP9.92□□□□□ -0.82
TNPO1-212ENST00000520850 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
TNPO1-212ENST00000520850 ZNF861PO60384 105 aa9.91□□□□□ -0.82
TNPO1-212ENST00000520850 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
TNPO1-212ENST00000520850 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
TNPO1-212ENST00000520850 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.82
TNPO1-212ENST00000520850 H0Y9J4 135 aa9.89□□□□□ -0.83
TNPO1-212ENST00000520850 BCE1O60756 84 aa9.89□□□□□ -0.83
TNPO1-212ENST00000520850 IGKV2D-26A0A0A0MRZ7 120 aa9.88□□□□□ -0.83
TNPO1-212ENST00000520850 C20orf202A1L168 122 aa9.88□□□□□ -0.83
TNPO1-212ENST00000520850 TNXBP22105 4242 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 A0A0U1RRA0 63 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 M0R378 163 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 KRTDAPP60985 99 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 Q8NDZ9 215 aa9.87□□□□□ -0.83
TNPO1-212ENST00000520850 HIST3H2BBQ8N257 126 aa9.86□□□□□ -0.83
TNPO1-212ENST00000520850 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
TNPO1-212ENST00000520850 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
TNPO1-212ENST00000520850 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
TNPO1-212ENST00000520850 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
TNPO1-212ENST00000520850 S100A6P06703 90 aa9.84□□□□□ -0.83
TNPO1-212ENST00000520850 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
TNPO1-212ENST00000520850 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
TNPO1-212ENST00000520850 TIMM17BO60830 172 aa9.83□□□□□ -0.84
TNPO1-212ENST00000520850 NDUFC2O95298 119 aa9.83□□□□□ -0.84
TNPO1-212ENST00000520850 S100A2P29034 98 aa9.83□□□□□ -0.84
TNPO1-212ENST00000520850 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
TNPO1-212ENST00000520850 HIST1H2BLQ99880 126 aa9.83□□□□□ -0.84
TNPO1-212ENST00000520850 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
TNPO1-212ENST00000520850 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
TNPO1-212ENST00000520850 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
TNPO1-212ENST00000520850 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
TNPO1-212ENST00000520850 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
TNPO1-212ENST00000520850 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
TNPO1-212ENST00000520850 KCNQ1DNQ9H478 68 aa9.8□□□□□ -0.84
TNPO1-212ENST00000520850 ADAMTSL4-AS1Q5T5F5 129 aa9.79□□□□□ -0.84
TNPO1-212ENST00000520850 DAND5Q8N907 189 aa9.79□□□□□ -0.84
TNPO1-212ENST00000520850 LITAFQ99732 161 aa9.79□□□□□ -0.84
TNPO1-212ENST00000520850 C5orf52A6NGY3 159 aa9.78□□□□□ -0.84
TNPO1-212ENST00000520850 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
TNPO1-212ENST00000520850 PRYO14603 147 aa9.77□□□□□ -0.85
TNPO1-212ENST00000520850 SPRR1AP35321 89 aa9.77□□□□□ -0.85
TNPO1-212ENST00000520850 UBE2AP49459 152 aa9.77□□□□□ -0.85
TNPO1-212ENST00000520850 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
TNPO1-212ENST00000520850 LOC100996750A0A140TA64 210 aa9.76□□□□□ -0.85
TNPO1-212ENST00000520850 TMEM238C9JI98 176 aa9.76□□□□□ -0.85
TNPO1-212ENST00000520850 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
TNPO1-212ENST00000520850 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
TNPO1-212ENST00000520850 KRTAP4-6Q9BYQ5 205 aa9.76□□□□□ -0.85
TNPO1-212ENST00000520850 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
TNPO1-212ENST00000520850 RPL13AP40429 203 aaKnown RBP9.75□□□□□ -0.85
TNPO1-212ENST00000520850 S100A12P80511 92 aa9.75□□□□□ -0.85
TNPO1-212ENST00000520850 ANKRD39Q53RE8 183 aa9.75□□□□□ -0.85
TNPO1-212ENST00000520850 SOSTDC1Q6X4U4 206 aa9.74□□□□□ -0.85
TNPO1-212ENST00000520850 Q6ZVH6 145 aa9.74□□□□□ -0.85
TNPO1-212ENST00000520850 FAM19A1Q7Z5A9 133 aa9.74□□□□□ -0.85
TNPO1-212ENST00000520850 TRBV10-3A0A0K0K1G6 114 aa9.73□□□□□ -0.85
TNPO1-212ENST00000520850 KRTAP4-16G5E9R7 235 aaPredicted RBP9.73□□□□□ -0.85
TNPO1-212ENST00000520850 NCR3O14931 201 aa9.73□□□□□ -0.85
TNPO1-212ENST00000520850 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
TNPO1-212ENST00000520850 IGLV6-57P01721 117 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 ATOH7Q8N100 152 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 PRR26Q8N8Z3 221 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 TTTY13Q9BZ97 58 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 CBY1Q9Y3M2 126 aa9.72□□□□□ -0.85
TNPO1-212ENST00000520850 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.86
TNPO1-212ENST00000520850 DDTP30046 118 aa9.71□□□□□ -0.86
TNPO1-212ENST00000520850 COPS9Q8WXC6 57 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms