RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
SREK1-207ENST00000520058 IGLV5-37A0A075B6J1 123 aa11.3□□□□□ -0.6
SREK1-207ENST00000520058 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
SREK1-207ENST00000520058 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
SREK1-207ENST00000520058 PMCHL2Q9BQD1 86 aa11.3□□□□□ -0.6
SREK1-207ENST00000520058 NMUP48645 174 aa11.29□□□□□ -0.6
SREK1-207ENST00000520058 COA6Q5JTJ3 125 aaKnown RBP11.29□□□□□ -0.6
SREK1-207ENST00000520058 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
SREK1-207ENST00000520058 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
SREK1-207ENST00000520058 J3QQQ9 107 aa11.28□□□□□ -0.6
SREK1-207ENST00000520058 LINC00167Q96N53 147 aa11.28□□□□□ -0.6
SREK1-207ENST00000520058 A0A0U1RRA0 63 aa11.27□□□□□ -0.61
SREK1-207ENST00000520058 KRTAP11-1Q8IUC1 163 aa11.27□□□□□ -0.61
SREK1-207ENST00000520058 LINC01600Q96MT4 127 aa11.27□□□□□ -0.61
SREK1-207ENST00000520058 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
SREK1-207ENST00000520058 RPL37AP8A6NKH3 93 aa11.26□□□□□ -0.61
SREK1-207ENST00000520058 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
SREK1-207ENST00000520058 C20orf202A1L168 122 aa11.24□□□□□ -0.61
SREK1-207ENST00000520058 H0Y9J4 135 aa11.24□□□□□ -0.61
SREK1-207ENST00000520058 ZNF861PO60384 105 aa11.23□□□□□ -0.61
SREK1-207ENST00000520058 BCE1O60756 84 aa11.23□□□□□ -0.61
SREK1-207ENST00000520058 VPREB1P12018 145 aa11.23□□□□□ -0.61
SREK1-207ENST00000520058 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
SREK1-207ENST00000520058 AKR1D1P51857 326 aa11.23□□□□□ -0.61
SREK1-207ENST00000520058 KRTDAPP60985 99 aa11.23□□□□□ -0.61
SREK1-207ENST00000520058 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
SREK1-207ENST00000520058 LRP1Q07954 4544 aaKnown RBP11.23□□□□□ -0.61
SREK1-207ENST00000520058 E9PLD3 99 aa11.22□□□□□ -0.61
SREK1-207ENST00000520058 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
SREK1-207ENST00000520058 C3orf79P0CE67 100 aa11.21□□□□□ -0.61
SREK1-207ENST00000520058 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
SREK1-207ENST00000520058 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
SREK1-207ENST00000520058 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
SREK1-207ENST00000520058 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
SREK1-207ENST00000520058 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
SREK1-207ENST00000520058 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
SREK1-207ENST00000520058 IGLV1-50A0A075B6I6 118 aa11.19□□□□□ -0.62
SREK1-207ENST00000520058 S100A12P80511 92 aa11.19□□□□□ -0.62
SREK1-207ENST00000520058 M0R378 163 aa11.18□□□□□ -0.62
SREK1-207ENST00000520058 S100A6P06703 90 aa11.18□□□□□ -0.62
SREK1-207ENST00000520058 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
SREK1-207ENST00000520058 S100A2P29034 98 aa11.18□□□□□ -0.62
SREK1-207ENST00000520058 UBE2AP49459 152 aa11.18□□□□□ -0.62
SREK1-207ENST00000520058 IGKV2D-26A0A0A0MRZ7 120 aa11.17□□□□□ -0.62
SREK1-207ENST00000520058 HERC1Q15751 4861 aa11.14□□□□□ -0.63
SREK1-207ENST00000520058 A0A0J9YXY3 114 aa11.13□□□□□ -0.63
SREK1-207ENST00000520058 FAM19A1Q7Z5A9 133 aa11.13□□□□□ -0.63
SREK1-207ENST00000520058 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
SREK1-207ENST00000520058 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
SREK1-207ENST00000520058 RPL13AP40429 203 aaKnown RBP11.12□□□□□ -0.63
SREK1-207ENST00000520058 KRTAP10-8P60410 259 aa11.12□□□□□ -0.63
SREK1-207ENST00000520058 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
SREK1-207ENST00000520058 DAND5Q8N907 189 aa11.12□□□□□ -0.63
SREK1-207ENST00000520058 ZNF815PA8K554 130 aa11.11□□□□□ -0.63
SREK1-207ENST00000520058 NCR3O14931 201 aa11.11□□□□□ -0.63
SREK1-207ENST00000520058 TMEM238C9JI98 176 aa11.1□□□□□ -0.63
SREK1-207ENST00000520058 Q8NDZ9 215 aa11.1□□□□□ -0.63
SREK1-207ENST00000520058 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
SREK1-207ENST00000520058 PRYO14603 147 aa11.09□□□□□ -0.63
SREK1-207ENST00000520058 TIMM17BO60830 172 aa11.08□□□□□ -0.64
SREK1-207ENST00000520058 NDUFC2O95298 119 aa11.08□□□□□ -0.64
SREK1-207ENST00000520058 SNRPEP62304 92 aaKnown RBP11.08□□□□□ -0.64
SREK1-207ENST00000520058 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
SREK1-207ENST00000520058 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
SREK1-207ENST00000520058 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
SREK1-207ENST00000520058 PRR26Q8N8Z3 221 aa11.07□□□□□ -0.64
SREK1-207ENST00000520058 PRLHP81277 87 aa11.06□□□□□ -0.64
SREK1-207ENST00000520058 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
SREK1-207ENST00000520058 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
SREK1-207ENST00000520058 KRTAP1-4P0C5Y4 121 aa11.05□□□□□ -0.64
SREK1-207ENST00000520058 KRTAP13-1Q8IUC0 172 aa11.05□□□□□ -0.64
SREK1-207ENST00000520058 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
SREK1-207ENST00000520058 KCNQ1DNQ9H478 68 aa11.05□□□□□ -0.64
SREK1-207ENST00000520058 CBY1Q9Y3M2 126 aa11.05□□□□□ -0.64
SREK1-207ENST00000520058 TRBV10-3A0A0K0K1G6 114 aa11.04□□□□□ -0.64
SREK1-207ENST00000520058 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
SREK1-207ENST00000520058 HSBP1L1C9JCN9 74 aa11.04□□□□□ -0.64
SREK1-207ENST00000520058 DDTP30046 118 aa11.04□□□□□ -0.64
SREK1-207ENST00000520058 NPC2P61916 151 aa11.04□□□□□ -0.64
SREK1-207ENST00000520058 ATOH7Q8N100 152 aa11.04□□□□□ -0.64
SREK1-207ENST00000520058 CRYGAP11844 174 aa11.03□□□□□ -0.64
SREK1-207ENST00000520058 ADAMTSL4-AS1Q5T5F5 129 aa11.03□□□□□ -0.64
SREK1-207ENST00000520058 LINC00337Q8N6G1 96 aa11.02□□□□□ -0.65
SREK1-207ENST00000520058 HIGD2AQ9BW72 106 aa11.02□□□□□ -0.65
SREK1-207ENST00000520058 SPANXCQ9NY87 97 aa11.01□□□□□ -0.65
SREK1-207ENST00000520058 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
SREK1-207ENST00000520058 LINC00308Q8TCZ7 52 aa11□□□□□ -0.65
SREK1-207ENST00000520058 SPRR1AP35321 89 aa10.99□□□□□ -0.65
SREK1-207ENST00000520058 TTTY13Q9BZ97 58 aa10.99□□□□□ -0.65
SREK1-207ENST00000520058 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
SREK1-207ENST00000520058 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
SREK1-207ENST00000520058 LITAFQ99732 161 aa10.98□□□□□ -0.65
SREK1-207ENST00000520058 HINT1P49773 126 aaPredicted RBP10.97□□□□□ -0.65
SREK1-207ENST00000520058 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
SREK1-207ENST00000520058 Q6ZVH6 145 aa10.97□□□□□ -0.65
SREK1-207ENST00000520058 LINC00518Q8N0U6 118 aa10.97□□□□□ -0.65
SREK1-207ENST00000520058 SCGB1D1O95968 90 aa10.96□□□□□ -0.65
SREK1-207ENST00000520058 OR13C6PQ8NH95 151 aa10.96□□□□□ -0.65
SREK1-207ENST00000520058 TNXBP22105 4242 aa10.95□□□□□ -0.66
SREK1-207ENST00000520058 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms