RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
FAM49B-208ENST00000518344 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
FAM49B-208ENST00000518344 TNXBP22105 4242 aa11.35□□□□□ -0.59
FAM49B-208ENST00000518344 IGLV5-37A0A075B6J1 123 aa11.34□□□□□ -0.59
FAM49B-208ENST00000518344 PLNP26678 52 aa11.34□□□□□ -0.59
FAM49B-208ENST00000518344 H0Y9J4 135 aa11.33□□□□□ -0.6
FAM49B-208ENST00000518344 DPM2O94777 84 aa11.33□□□□□ -0.6
FAM49B-208ENST00000518344 IGKCP01834 107 aa11.32□□□□□ -0.6
FAM49B-208ENST00000518344 KRTAP10-8P60410 259 aa11.32□□□□□ -0.6
FAM49B-208ENST00000518344 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
FAM49B-208ENST00000518344 MEIG1Q5JSS6 88 aa11.32□□□□□ -0.6
FAM49B-208ENST00000518344 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
FAM49B-208ENST00000518344 ATP6V1G1O75348 118 aa11.31□□□□□ -0.6
FAM49B-208ENST00000518344 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
FAM49B-208ENST00000518344 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
FAM49B-208ENST00000518344 LEPROTO15243 131 aa11.3□□□□□ -0.6
FAM49B-208ENST00000518344 ZNF861PO60384 105 aa11.3□□□□□ -0.6
FAM49B-208ENST00000518344 BCE1O60756 84 aa11.3□□□□□ -0.6
FAM49B-208ENST00000518344 VPREB1P12018 145 aa11.3□□□□□ -0.6
FAM49B-208ENST00000518344 HERV-K104P63124 156 aa11.3□□□□□ -0.6
FAM49B-208ENST00000518344 IGKV2-28A0A075B6P5 120 aa11.29□□□□□ -0.6
FAM49B-208ENST00000518344 IGKV2D-28P01615 120 aa11.29□□□□□ -0.6
FAM49B-208ENST00000518344 HERVK_113P61574 105 aa11.29□□□□□ -0.6
FAM49B-208ENST00000518344 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
FAM49B-208ENST00000518344 PLEKHB2Q96CS7 222 aa11.28□□□□□ -0.6
FAM49B-208ENST00000518344 Q8NDZ9 215 aa11.27□□□□□ -0.61
FAM49B-208ENST00000518344 LINC00587B1AMM8 73 aa11.26□□□□□ -0.61
FAM49B-208ENST00000518344 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
FAM49B-208ENST00000518344 J3QQQ9 107 aa11.26□□□□□ -0.61
FAM49B-208ENST00000518344 RPL28P46779 137 aaKnown RBP11.26□□□□□ -0.61
FAM49B-208ENST00000518344 MIR7-3HGQ8N6C7 128 aa11.26□□□□□ -0.61
FAM49B-208ENST00000518344 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
FAM49B-208ENST00000518344 IGLV1-50A0A075B6I6 118 aa11.24□□□□□ -0.61
FAM49B-208ENST00000518344 LGALS3P17931 250 aaKnown RBP11.24□□□□□ -0.61
FAM49B-208ENST00000518344 HMCN2Q8NDA2 5059 aa11.23□□□□□ -0.61
FAM49B-208ENST00000518344 UBE2AP49459 152 aa11.23□□□□□ -0.61
FAM49B-208ENST00000518344 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
FAM49B-208ENST00000518344 KRTAP1-4P0C5Y4 121 aa11.22□□□□□ -0.61
FAM49B-208ENST00000518344 TMEM238C9JI98 176 aa11.21□□□□□ -0.61
FAM49B-208ENST00000518344 NMUP48645 174 aa11.21□□□□□ -0.61
FAM49B-208ENST00000518344 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.61
FAM49B-208ENST00000518344 PET117Q6UWS5 81 aa11.21□□□□□ -0.61
FAM49B-208ENST00000518344 DAND5Q8N907 189 aa11.2□□□□□ -0.62
FAM49B-208ENST00000518344 TMEM126AQ9H061 195 aa11.2□□□□□ -0.62
FAM49B-208ENST00000518344 E9PLD3 99 aa11.19□□□□□ -0.62
FAM49B-208ENST00000518344 M0R378 163 aa11.19□□□□□ -0.62
FAM49B-208ENST00000518344 S100A1P23297 94 aa11.19□□□□□ -0.62
FAM49B-208ENST00000518344 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
FAM49B-208ENST00000518344 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
FAM49B-208ENST00000518344 NCR3O14931 201 aa11.18□□□□□ -0.62
FAM49B-208ENST00000518344 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
FAM49B-208ENST00000518344 KRTDAPP60985 99 aa11.18□□□□□ -0.62
FAM49B-208ENST00000518344 PRLHP81277 87 aa11.16□□□□□ -0.62
FAM49B-208ENST00000518344 KRTAP13-1Q8IUC0 172 aa11.16□□□□□ -0.62
FAM49B-208ENST00000518344 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
FAM49B-208ENST00000518344 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
FAM49B-208ENST00000518344 LCE2BO14633 110 aa11.13□□□□□ -0.63
FAM49B-208ENST00000518344 RPL13AP40429 203 aaKnown RBP11.13□□□□□ -0.63
FAM49B-208ENST00000518344 MIEN1Q9BRT3 115 aa11.13□□□□□ -0.63
FAM49B-208ENST00000518344 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
FAM49B-208ENST00000518344 NPC2P61916 151 aa11.11□□□□□ -0.63
FAM49B-208ENST00000518344 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
FAM49B-208ENST00000518344 ANAPC11Q9NYG5 84 aa11.11□□□□□ -0.63
FAM49B-208ENST00000518344 C20orf202A1L168 122 aa11.1□□□□□ -0.63
FAM49B-208ENST00000518344 TRBV10-3A0A0K0K1G6 114 aa11.09□□□□□ -0.63
FAM49B-208ENST00000518344 PRYO14603 147 aa11.09□□□□□ -0.63
FAM49B-208ENST00000518344 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
FAM49B-208ENST00000518344 CRYGAP11844 174 aa11.08□□□□□ -0.64
FAM49B-208ENST00000518344 HIGD2AQ9BW72 106 aa11.08□□□□□ -0.64
FAM49B-208ENST00000518344 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
FAM49B-208ENST00000518344 A0A087X002 238 aa11.07□□□□□ -0.64
FAM49B-208ENST00000518344 ZNF815PA8K554 130 aa11.07□□□□□ -0.64
FAM49B-208ENST00000518344 S100A12P80511 92 aa11.07□□□□□ -0.64
FAM49B-208ENST00000518344 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
FAM49B-208ENST00000518344 DDTP30046 118 aa11.06□□□□□ -0.64
FAM49B-208ENST00000518344 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
FAM49B-208ENST00000518344 ATOH7Q8N100 152 aa11.06□□□□□ -0.64
FAM49B-208ENST00000518344 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
FAM49B-208ENST00000518344 SPANXB1Q9NS25 103 aaPredicted RBP11.06□□□□□ -0.64
FAM49B-208ENST00000518344 TYMSOSQ8TAI1 123 aa11.05□□□□□ -0.64
FAM49B-208ENST00000518344 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
FAM49B-208ENST00000518344 EIF4EBP3O60516 100 aaPredicted RBP11.04□□□□□ -0.64
FAM49B-208ENST00000518344 NDUFC2O95298 119 aa11.04□□□□□ -0.64
FAM49B-208ENST00000518344 S100A2P29034 98 aa11.04□□□□□ -0.64
FAM49B-208ENST00000518344 S100A7L2Q5SY68 101 aa11.04□□□□□ -0.64
FAM49B-208ENST00000518344 LINC00337Q8N6G1 96 aa11.04□□□□□ -0.64
FAM49B-208ENST00000518344 SPRR1AP35321 89 aa11.03□□□□□ -0.64
FAM49B-208ENST00000518344 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
FAM49B-208ENST00000518344 LITAFQ99732 161 aa11.03□□□□□ -0.64
FAM49B-208ENST00000518344 TIMM17BO60830 172 aa11.02□□□□□ -0.65
FAM49B-208ENST00000518344 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
FAM49B-208ENST00000518344 S100A6P06703 90 aa11.01□□□□□ -0.65
FAM49B-208ENST00000518344 FAM229BQ4G0N7 80 aa11.01□□□□□ -0.65
FAM49B-208ENST00000518344 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
FAM49B-208ENST00000518344 KRTAP4-16G5E9R7 235 aaPredicted RBP11□□□□□ -0.65
FAM49B-208ENST00000518344 AKR1D1P51857 326 aa11□□□□□ -0.65
FAM49B-208ENST00000518344 KRTAP13-2Q52LG2 175 aa11□□□□□ -0.65
FAM49B-208ENST00000518344 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
FAM49B-208ENST00000518344 SCGB1D4Q6XE38 83 aa10.99□□□□□ -0.65
FAM49B-208ENST00000518344 TSPAN13O95857 204 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms