RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 NEBP20929 6669 aa0.42□□□□□ -2.34
RNU6-27P-201ENST00000516146 ALKQ9UM73 1620 aa0.42□□□□□ -2.34
RNU6-27P-201ENST00000516146 NMSQ5H8A3 153 aa0.42□□□□□ -2.34
RNU6-27P-201ENST00000516146 UBE2D4Q9Y2X8 147 aa0.42□□□□□ -2.34
RNU6-27P-201ENST00000516146 UBR5O95071 2799 aaPredicted RBP0.42□□□□□ -2.34
RNU6-27P-201ENST00000516146 CSPG4Q6UVK1 2322 aa0.42□□□□□ -2.34
RNU6-27P-201ENST00000516146 IGLC2P0DOY2 106 aa0.41□□□□□ -2.34
RNU6-27P-201ENST00000516146 IGLC3P0DOY3 106 aa0.41□□□□□ -2.34
RNU6-27P-201ENST00000516146 SNRPFP62306 86 aaKnown RBP0.41□□□□□ -2.34
RNU6-27P-201ENST00000516146 PLGLAQ15195 96 aa0.41□□□□□ -2.34
RNU6-27P-201ENST00000516146 WNK2Q9Y3S1 2297 aa0.41□□□□□ -2.34
RNU6-27P-201ENST00000516146 RGPD2P0DJD1 1756 aa0.4□□□□□ -2.35
RNU6-27P-201ENST00000516146 MAP3K4Q9Y6R4 1608 aa0.4□□□□□ -2.35
RNU6-27P-201ENST00000516146 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
RNU6-27P-201ENST00000516146 I3L3M4 83 aa0.4□□□□□ -2.35
RNU6-27P-201ENST00000516146 SPINK4O60575 86 aa0.4□□□□□ -2.35
RNU6-27P-201ENST00000516146 UACAQ9BZF9 1416 aa0.39□□□□□ -2.35
RNU6-27P-201ENST00000516146 NEXMIFQ5QGS0 1516 aa0.39□□□□□ -2.35
RNU6-27P-201ENST00000516146 KIF14Q15058 1648 aa0.39□□□□□ -2.35
RNU6-27P-201ENST00000516146 QSER1Q2KHR3 1735 aa0.39□□□□□ -2.35
RNU6-27P-201ENST00000516146 SLIT1O75093 1534 aa0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 HRNRQ86YZ3 2850 aaPredicted RBP0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 BCORQ6W2J9 1755 aa0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 DEFB112Q30KQ8 113 aa0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 FXYD6Q9H0Q3 95 aa0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 CHD6Q8TD26 2715 aa0.38□□□□□ -2.35
RNU6-27P-201ENST00000516146 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 SPTA1P02549 2419 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 PTPN13Q12923 2485 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 SPTY2D1-AS1A0A0U1RR47 76 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 A0A1B0GUT8 65 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 CPSF4LA6NMK7 179 aaKnown RBP0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 IQCF6A8MYZ5 107 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 ACYP1P07311 99 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 LINC00643Q86TS7 51 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 DEFB105AQ8NG35 78 aa0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
RNU6-27P-201ENST00000516146 MYMXA0A1B0GTQ4 84 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 TENM4Q6N022 2769 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 CELSR1Q9NYQ6 3014 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 HIVEP3Q5T1R4 2406 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 CSMD3Q7Z407 3707 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 KMT2DO14686 5537 aa0.36□□□□□ -2.35
RNU6-27P-201ENST00000516146 NKTRP30414 1462 aaKnown RBP0.35□□□□□ -2.35
RNU6-27P-201ENST00000516146 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
RNU6-27P-201ENST00000516146 LTN1O94822 1766 aa0.35□□□□□ -2.35
RNU6-27P-201ENST00000516146 KANTRA0A1W2PQU2 76 aa0.35□□□□□ -2.35
RNU6-27P-201ENST00000516146 ATP7BP35670 1465 aa0.35□□□□□ -2.35
RNU6-27P-201ENST00000516146 APLNQ9ULZ1 77 aa0.34□□□□□ -2.36
RNU6-27P-201ENST00000516146 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
RNU6-27P-201ENST00000516146 TMEM131LA2VDJ0 1609 aa0.34□□□□□ -2.36
RNU6-27P-201ENST00000516146 RGPD1P0DJD0 1748 aa0.33□□□□□ -2.36
RNU6-27P-201ENST00000516146 DMBT1Q9UGM3 2413 aaPredicted RBP0.33□□□□□ -2.36
RNU6-27P-201ENST00000516146 MED14O60244 1454 aa0.33□□□□□ -2.36
RNU6-27P-201ENST00000516146 CCDC18Q5T9S5 1454 aa0.33□□□□□ -2.36
RNU6-27P-201ENST00000516146 ATRQ13535 2644 aa0.33□□□□□ -2.36
RNU6-27P-201ENST00000516146 TIAM2Q8IVF5 1701 aa0.33□□□□□ -2.36
RNU6-27P-201ENST00000516146 CEBPZOSA8MTT3 80 aa0.32□□□□□ -2.36
RNU6-27P-201ENST00000516146 CCL22O00626 93 aa0.32□□□□□ -2.36
RNU6-27P-201ENST00000516146 TDRG1Q3Y452 100 aa0.32□□□□□ -2.36
RNU6-27P-201ENST00000516146 LRRC9Q6ZRR7 1453 aa0.32□□□□□ -2.36
RNU6-27P-201ENST00000516146 CLIP1P30622 1438 aa0.31□□□□□ -2.36
RNU6-27P-201ENST00000516146 COX7BP24311 80 aa0.31□□□□□ -2.36
RNU6-27P-201ENST00000516146 S100A13Q99584 98 aa0.31□□□□□ -2.36
RNU6-27P-201ENST00000516146 MRPL34Q9BQ48 92 aaKnown RBP0.31□□□□□ -2.36
RNU6-27P-201ENST00000516146 LRRC7Q96NW7 1537 aa0.31□□□□□ -2.36
RNU6-27P-201ENST00000516146 RPL38P63173 70 aaKnown RBP0.3□□□□□ -2.36
RNU6-27P-201ENST00000516146 ADIRFQ15847 76 aa0.3□□□□□ -2.36
RNU6-27P-201ENST00000516146 KLK9Q2XQG4 91 aa0.3□□□□□ -2.36
RNU6-27P-201ENST00000516146 GAFA1Q96PS6 74 aa0.3□□□□□ -2.36
RNU6-27P-201ENST00000516146 RGPD8O14715 1765 aaPredicted RBP0.29□□□□□ -2.36
RNU6-27P-201ENST00000516146 RGPD5Q99666 1765 aa0.29□□□□□ -2.36
RNU6-27P-201ENST00000516146 MAGI2Q86UL8 1455 aa0.29□□□□□ -2.36
RNU6-27P-201ENST00000516146 PCLOQ9Y6V0 5065 aa0.29□□□□□ -2.36
RNU6-27P-201ENST00000516146 MUC2Q02817 5179 aa0.29□□□□□ -2.36
RNU6-27P-201ENST00000516146 CNOT1A5YKK6 2376 aaKnown RBP0.28□□□□□ -2.36
RNU6-27P-201ENST00000516146 POLR1AO95602 1720 aaPredicted RBP0.28□□□□□ -2.36
RNU6-27P-201ENST00000516146 NDUFB1O75438 58 aa0.28□□□□□ -2.36
RNU6-27P-201ENST00000516146 ST20Q9HBF5 79 aa0.28□□□□□ -2.36
RNU6-27P-201ENST00000516146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU6-27P-201ENST00000516146 SCRIBQ14160 1630 aa0.27□□□□□ -2.37
RNU6-27P-201ENST00000516146 TRAV21A0A0B4J279 112 aa0.27□□□□□ -2.37
RNU6-27P-201ENST00000516146 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
RNU6-27P-201ENST00000516146 WNK1Q9H4A3 2382 aa0.27□□□□□ -2.37
RNU6-27P-201ENST00000516146 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
RNU6-27P-201ENST00000516146 H1FX-AS1Q4G0G2 97 aa0.26□□□□□ -2.37
RNU6-27P-201ENST00000516146 WFDC9Q8NEX5 89 aa0.26□□□□□ -2.37
RNU6-27P-201ENST00000516146 PREX1Q8TCU6 1659 aa0.26□□□□□ -2.37
RNU6-27P-201ENST00000516146 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
RNU6-27P-201ENST00000516146 URB2Q14146 1524 aaKnown RBP0.25□□□□□ -2.37
RNU6-27P-201ENST00000516146 HUWE1Q7Z6Z7 4374 aaKnown RBP0.25□□□□□ -2.37
RNU6-27P-201ENST00000516146 HEPN1Q6WQI6 88 aa0.25□□□□□ -2.37
RNU6-27P-201ENST00000516146 CDKN2A-AS1Q9UH64 79 aa0.25□□□□□ -2.37
RNU6-27P-201ENST00000516146 MAP1BP46821 2468 aaKnown RBP0.24□□□□□ -2.37
RNU6-27P-201ENST00000516146 COL6A3P12111 3177 aa0.24□□□□□ -2.37
RNU6-27P-201ENST00000516146 MYCBP2O75592 4640 aa0.23□□□□□ -2.37
RNU6-27P-201ENST00000516146 DCAF1Q9Y4B6 1507 aa0.23□□□□□ -2.37
RNU6-27P-201ENST00000516146 PIK3C2BO00750 1634 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms