RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TRAV36DV7A0A075B6V5 113 aa-4.1□□□□□ -3.07
SCARNA23-201ENST00000516060 C9orf153Q5TBE3 101 aa-4.1□□□□□ -3.07
SCARNA23-201ENST00000516060 TOMM20LQ6UXN7 152 aa-4.1□□□□□ -3.07
SCARNA23-201ENST00000516060 VPS13CQ709C8 3753 aa-4.1□□□□□ -3.07
SCARNA23-201ENST00000516060 FAM223BA6NKX1 122 aa-4.11□□□□□ -3.07
SCARNA23-201ENST00000516060 SAA2P0DJI9 122 aaPredicted RBP-4.11□□□□□ -3.07
SCARNA23-201ENST00000516060 COX6B2Q6YFQ2 88 aa-4.11□□□□□ -3.07
SCARNA23-201ENST00000516060 ATPIF1Q9UII2 106 aa-4.11□□□□□ -3.07
SCARNA23-201ENST00000516060 PREX1Q8TCU6 1659 aa-4.11□□□□□ -3.07
SCARNA23-201ENST00000516060 FYCO1Q9BQS8 1478 aa-4.11□□□□□ -3.07
SCARNA23-201ENST00000516060 TCHHQ07283 1943 aa-4.12□□□□□ -3.07
SCARNA23-201ENST00000516060 SAMD13Q5VXD3 122 aa-4.12□□□□□ -3.07
SCARNA23-201ENST00000516060 MMGT1Q8N4V1 131 aa-4.12□□□□□ -3.07
SCARNA23-201ENST00000516060 CUX1P39880 1505 aa-4.12□□□□□ -3.07
SCARNA23-201ENST00000516060 CEP152O94986 1710 aa-4.12□□□□□ -3.07
SCARNA23-201ENST00000516060 TRBV7-7A0A0K0K1E9 115 aa-4.13□□□□□ -3.07
SCARNA23-201ENST00000516060 TMEM128Q5BJH2 165 aa-4.13□□□□□ -3.07
SCARNA23-201ENST00000516060 CENPEQ02224 2701 aa-4.13□□□□□ -3.07
SCARNA23-201ENST00000516060 ABCC10Q5T3U5 1492 aa-4.13□□□□□ -3.07
SCARNA23-201ENST00000516060 A0A1B0GX51 115 aa-4.14□□□□□ -3.07
SCARNA23-201ENST00000516060 MT1FP04733 61 aa-4.14□□□□□ -3.07
SCARNA23-201ENST00000516060 MRPS25P82663 173 aaKnown RBP-4.14□□□□□ -3.07
SCARNA23-201ENST00000516060 PSENENQ9NZ42 101 aa-4.14□□□□□ -3.07
SCARNA23-201ENST00000516060 TARBP1Q13395 1621 aaKnown RBP-4.14□□□□□ -3.07
SCARNA23-201ENST00000516060 PLXNC1O60486 1568 aa-4.14□□□□□ -3.07
SCARNA23-201ENST00000516060 A0A0G2JND7 137 aa-4.15□□□□□ -3.07
SCARNA23-201ENST00000516060 TNP1P09430 55 aa-4.15□□□□□ -3.07
SCARNA23-201ENST00000516060 IGLC6P0CF74 106 aa-4.15□□□□□ -3.07
SCARNA23-201ENST00000516060 ASIPP42127 132 aa-4.15□□□□□ -3.07
SCARNA23-201ENST00000516060 UQCR10Q9UDW1 63 aa-4.15□□□□□ -3.07
SCARNA23-201ENST00000516060 SHROOM2Q13796 1616 aa-4.16□□□□□ -3.08
SCARNA23-201ENST00000516060 PP6455Q8WZ26 134 aa-4.16□□□□□ -3.08
SCARNA23-201ENST00000516060 DIP2CQ9Y2E4 1556 aa-4.16□□□□□ -3.08
SCARNA23-201ENST00000516060 ARMS2P0C7Q2 107 aa-4.18□□□□□ -3.08
SCARNA23-201ENST00000516060 TFAMQ00059 246 aaKnown RBP-4.18□□□□□ -3.08
SCARNA23-201ENST00000516060 TRIQKQ629K1 86 aa-4.18□□□□□ -3.08
SCARNA23-201ENST00000516060 DEFB106AQ8N104 65 aa-4.18□□□□□ -3.08
SCARNA23-201ENST00000516060 C12orf73Q69YU5 71 aa-4.19□□□□□ -3.08
SCARNA23-201ENST00000516060 PRO3102Q9H379 93 aa-4.19□□□□□ -3.08
SCARNA23-201ENST00000516060 ROCK1Q13464 1354 aa-4.19□□□□□ -3.08
SCARNA23-201ENST00000516060 ZNF831Q5JPB2 1677 aa-4.19□□□□□ -3.08
SCARNA23-201ENST00000516060 RGPD3A6NKT7 1758 aaPredicted RBP-4.19□□□□□ -3.08
SCARNA23-201ENST00000516060 RGPD4Q7Z3J3 1758 aa-4.19□□□□□ -3.08
SCARNA23-201ENST00000516060 ANKRD36CQ5JPF3 1778 aa-4.2□□□□□ -3.08
SCARNA23-201ENST00000516060 OVOS2A0A0J9YW53 1432 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 OVOS2Q6IE36 1432 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 RGPD8O14715 1765 aaPredicted RBP-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 RGPD5Q99666 1765 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 MRC2Q9UBG0 1479 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 GUCA1AP43080 201 aaPredicted RBP-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 KCNRGQ8N5I3 272 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 GID8Q9NWU2 228 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 CEP350Q5VT06 3117 aa-4.21□□□□□ -3.08
SCARNA23-201ENST00000516060 KIF20BQ96Q89 1820 aa-4.22□□□□□ -3.08
SCARNA23-201ENST00000516060 H0Y9P7 68 aa-4.22□□□□□ -3.08
SCARNA23-201ENST00000516060 LINC00694P0DN24 101 aa-4.22□□□□□ -3.08
SCARNA23-201ENST00000516060 PCBD2Q9H0N5 130 aa-4.22□□□□□ -3.08
SCARNA23-201ENST00000516060 CUL7Q14999 1698 aa-4.22□□□□□ -3.09
SCARNA23-201ENST00000516060 A2ML1A8K2U0 1454 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 MMP24-AS1A0A0U1RRL7 71 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 H3BQF6 201 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 MORN2Q502X0 79 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 DEFB107AQ8IZN7 70 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 ARL11Q969Q4 196 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 SNRNP25Q9BV90 132 aaKnown RBP-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 LINC00474Q9P2X8 69 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 CPSF1Q10570 1443 aaKnown RBP-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 PBRM1Q86U86 1689 aa-4.23□□□□□ -3.09
SCARNA23-201ENST00000516060 TNRC6CQ9HCJ0 1690 aaKnown RBP-4.24□□□□□ -3.09
SCARNA23-201ENST00000516060 GNGT1P63211 74 aa-4.24□□□□□ -3.09
SCARNA23-201ENST00000516060 SPANXDQ9BXN6 97 aa-4.24□□□□□ -3.09
SCARNA23-201ENST00000516060 ABCC5O15440 1437 aa-4.24□□□□□ -3.09
SCARNA23-201ENST00000516060 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.24□□□□□ -3.09
SCARNA23-201ENST00000516060 SHPRHQ149N8 1683 aa-4.25□□□□□ -3.09
SCARNA23-201ENST00000516060 FRYLO94915 3013 aa-4.25□□□□□ -3.09
SCARNA23-201ENST00000516060 TSPAN19P0C672 248 aa-4.25□□□□□ -3.09
SCARNA23-201ENST00000516060 SFTA2Q6UW10 78 aa-4.25□□□□□ -3.09
SCARNA23-201ENST00000516060 LSM10Q969L4 123 aaKnown RBP-4.25□□□□□ -3.09
SCARNA23-201ENST00000516060 USP32Q8NFA0 1604 aa-4.25□□□□□ -3.09
SCARNA23-201ENST00000516060 QSER1Q2KHR3 1735 aa-4.26□□□□□ -3.09
SCARNA23-201ENST00000516060 AIF1LQ9BQI0 150 aa-4.26□□□□□ -3.09
SCARNA23-201ENST00000516060 C3orf79P0CE67 100 aa-4.27□□□□□ -3.09
SCARNA23-201ENST00000516060 LINC00158P58513 81 aa-4.27□□□□□ -3.09
SCARNA23-201ENST00000516060 UBE2L5PA0A1B0GUS4 154 aa-4.28□□□□□ -3.09
SCARNA23-201ENST00000516060 S100GP29377 79 aa-4.28□□□□□ -3.09
SCARNA23-201ENST00000516060 HSD52Q0P140 79 aa-4.28□□□□□ -3.09
SCARNA23-201ENST00000516060 SKA2Q8WVK7 121 aaPredicted RBP-4.28□□□□□ -3.09
SCARNA23-201ENST00000516060 MON2Q7Z3U7 1717 aa-4.29□□□□□ -3.1
SCARNA23-201ENST00000516060 TRAPPC2P0DI81 140 aa-4.29□□□□□ -3.1
SCARNA23-201ENST00000516060 TRAPPC2BP0DI82 140 aa-4.29□□□□□ -3.1
SCARNA23-201ENST00000516060 UBE2L3P68036 154 aaKnown RBP-4.29□□□□□ -3.1
SCARNA23-201ENST00000516060 CCDC153Q494R4 210 aa-4.29□□□□□ -3.1
SCARNA23-201ENST00000516060 PSMG4Q5JS54 123 aa-4.29□□□□□ -3.1
SCARNA23-201ENST00000516060 PCNTO95613 3336 aa-4.3□□□□□ -3.1
SCARNA23-201ENST00000516060 SAMD9Q5K651 1589 aa-4.3□□□□□ -3.1
SCARNA23-201ENST00000516060 TOP2BQ02880 1626 aa-4.3□□□□□ -3.1
SCARNA23-201ENST00000516060 DBIP07108 87 aaKnown RBP-4.3□□□□□ -3.1
SCARNA23-201ENST00000516060 COMMD6Q7Z4G1 85 aa-4.3□□□□□ -3.1
SCARNA23-201ENST00000516060 CFTRP13569 1480 aa-4.3□□□□□ -3.1
SCARNA23-201ENST00000516060 WIZO95785 1651 aa-4.31□□□□□ -3.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms