RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 TRBV6-4A0A1B0GX49 114 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
NPHP3-211ENST00000515289 HINT1P49773 126 aaPredicted RBP4.08□□□□□ -1.76
NPHP3-211ENST00000515289 ATRQ13535 2644 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 BVES-AS1Q5T3Y7 98 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 NIPBLQ6KC79 2804 aaeCLIP4.08□□□□□ -1.76
NPHP3-211ENST00000515289 Q6ZUT4 128 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 C11orf68Q9H3H3 251 aaKnown RBP4.08□□□□□ -1.76
NPHP3-211ENST00000515289 SPANXA1Q9NS26 97 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 VWFP04275 2813 aa4.08□□□□□ -1.76
NPHP3-211ENST00000515289 TRGV2A0A075B6R0 118 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 UBE2L6O14933 153 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 NDUFC2O95298 119 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
NPHP3-211ENST00000515289 EMP1P54849 157 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 MRPS36P82909 103 aaKnown RBP4.07□□□□□ -1.76
NPHP3-211ENST00000515289 DEFB135Q30KP9 77 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 COL5A1-AS1Q5SY13 56 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 Q8NAQ8 132 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 PRADC1Q9BSG0 188 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 TIMM21Q9BVV7 248 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 BAHCC1Q9P281 2608 aa4.07□□□□□ -1.76
NPHP3-211ENST00000515289 TEP1Q99973 2627 aaKnown RBP4.06□□□□□ -1.76
NPHP3-211ENST00000515289 TRBV25-1A0A075B6N4 114 aa4.06□□□□□ -1.76
NPHP3-211ENST00000515289 HSD52Q0P140 79 aa4.06□□□□□ -1.76
NPHP3-211ENST00000515289 ZFAND6Q6FIF0 208 aa4.06□□□□□ -1.76
NPHP3-211ENST00000515289 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
NPHP3-211ENST00000515289 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 DEFB130BP0DP73 79 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 DEFB130AP0DP74 79 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 UBE2D1P51668 147 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 Q6Q795 121 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
NPHP3-211ENST00000515289 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 TAX1BP3O14907 124 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 DEFB4AO15263 64 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 MIFP14174 115 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 SEC11AP67812 179 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 CMYA5Q8N3K9 4069 aa4.04□□□□□ -1.76
NPHP3-211ENST00000515289 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
NPHP3-211ENST00000515289 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 K7EP13 123 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 LEPROTO15243 131 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 SCGB1A1P11684 91 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 ZNF25P17030 456 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-211ENST00000515289 FXYD2P54710 66 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 TMEM170BQ5T4T1 132 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 KPRPQ5T749 579 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-211ENST00000515289 OR5A1Q8NGJ0 315 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 MUC7Q8TAX7 377 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 PLEKHB2Q96CS7 222 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 PRO0255Q9UI72 69 aa4.03□□□□□ -1.76
NPHP3-211ENST00000515289 TRBV6-8A0A0A6YYG3 113 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 A0A0J9YY99 117 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 J3QQQ9 107 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 COX6A2Q02221 97 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 XAGE1AQ9HD64 81 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 KLK12Q9UKR0 248 aa4.02□□□□□ -1.77
NPHP3-211ENST00000515289 IGLV4-60A0A075B6I1 120 aa4.01□□□□□ -1.77
NPHP3-211ENST00000515289 IGHV1-58A0A0C4DH39 117 aa4.01□□□□□ -1.77
NPHP3-211ENST00000515289 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
NPHP3-211ENST00000515289 C10orf126Q8N4M7 172 aa4.01□□□□□ -1.77
NPHP3-211ENST00000515289 ATP6V0E2Q8NHE4 81 aa4.01□□□□□ -1.77
NPHP3-211ENST00000515289 IGHV3-64A0A075B6Q5 118 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 H3BRM9 83 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 SPINK8P0C7L1 97 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 SPART-AS1P0CW21 52 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 LGALS3P17931 250 aaKnown RBP4□□□□□ -1.77
NPHP3-211ENST00000515289 RBX1P62877 108 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 CDKN2A-AS1Q9UH64 79 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 STAB1Q9NY15 2570 aa4□□□□□ -1.77
NPHP3-211ENST00000515289 ANK2Q01484 3957 aa3.99□□□□□ -1.77
NPHP3-211ENST00000515289 TRAV13-1A0A0B4J241 112 aa3.99□□□□□ -1.77
NPHP3-211ENST00000515289 K7ERJ3 54 aa3.99□□□□□ -1.77
NPHP3-211ENST00000515289 AMMECR1LQ6DCA0 310 aa3.99□□□□□ -1.77
NPHP3-211ENST00000515289 A0A096LPF7 62 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 A8MU10 97 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 K7EIL1 84 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 IGHV3-30P01768 117 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 IGHV3-30-5P0DP03 117 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 NDUFA12Q9UI09 145 aa3.98□□□□□ -1.77
NPHP3-211ENST00000515289 IGKV2D-24A0A075B6R9 120 aa3.97□□□□□ -1.77
NPHP3-211ENST00000515289 A0A1B0GU33 70 aa3.97□□□□□ -1.77
NPHP3-211ENST00000515289 NDUFA1O15239 70 aa3.97□□□□□ -1.77
NPHP3-211ENST00000515289 SMIM13P0DJ93 91 aa3.97□□□□□ -1.77
NPHP3-211ENST00000515289 ZNF625Q96I27 306 aaPredicted RBP3.97□□□□□ -1.77
NPHP3-211ENST00000515289 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
NPHP3-211ENST00000515289 NHP2Q9NX24 153 aaKnown RBP3.97□□□□□ -1.77
NPHP3-211ENST00000515289 MAST4O15021 2626 aa3.97□□□□□ -1.77
NPHP3-211ENST00000515289 LINC00959A0A1B0GUT2 108 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 H3BNG1 76 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 CCL25O15444 150 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 TIMM17BO60830 172 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 PRB2P02812 416 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms