RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
HERC4-214ENST00000513996 REG3GQ6UW15 175 aa5.3□□□□□ -1.56
HERC4-214ENST00000513996 BAGE3Q86Y29 109 aa5.3□□□□□ -1.56
HERC4-214ENST00000513996 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
HERC4-214ENST00000513996 HBDP02042 147 aa5.29□□□□□ -1.56
HERC4-214ENST00000513996 ZNF22P17026 224 aaPredicted RBP5.29□□□□□ -1.56
HERC4-214ENST00000513996 CXCL5P42830 114 aa5.29□□□□□ -1.56
HERC4-214ENST00000513996 HIST3H2BBQ8N257 126 aa5.29□□□□□ -1.56
HERC4-214ENST00000513996 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
HERC4-214ENST00000513996 SERF1AO75920 110 aa5.28□□□□□ -1.56
HERC4-214ENST00000513996 UBE2BP63146 152 aa5.28□□□□□ -1.56
HERC4-214ENST00000513996 LOC105371267A0A1B0GV96 52 aa5.27□□□□□ -1.57
HERC4-214ENST00000513996 C9orf118A6NHY6 69 aa5.27□□□□□ -1.57
HERC4-214ENST00000513996 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
HERC4-214ENST00000513996 B5MCH6 92 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 H0Y9J4 135 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 H3BRM9 83 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 NUPR1O60356 82 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 HSBP1O75506 76 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 ATP5LO75964 103 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 KRTAP1-4P0C5Y4 121 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 S100A2P29034 98 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 DIRC1Q969H9 104 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
HERC4-214ENST00000513996 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
HERC4-214ENST00000513996 LINC00167Q96N53 147 aa5.25□□□□□ -1.57
HERC4-214ENST00000513996 HIST1H2BLQ99880 126 aa5.25□□□□□ -1.57
HERC4-214ENST00000513996 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
HERC4-214ENST00000513996 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
HERC4-214ENST00000513996 RPL37AP8A6NKH3 93 aa5.24□□□□□ -1.57
HERC4-214ENST00000513996 PFN2P35080 140 aa5.24□□□□□ -1.57
HERC4-214ENST00000513996 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
HERC4-214ENST00000513996 TMEM170BQ5T4T1 132 aa5.24□□□□□ -1.57
HERC4-214ENST00000513996 FAM19A2Q8N3H0 131 aa5.24□□□□□ -1.57
HERC4-214ENST00000513996 IFI27L1Q96BM0 104 aa5.24□□□□□ -1.57
HERC4-214ENST00000513996 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
HERC4-214ENST00000513996 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
HERC4-214ENST00000513996 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 GAGE10A6NGK3 116 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 ZNF861PO60384 105 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 Q8NDZ9 215 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 HSPB8Q9UJY1 196 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 LRP2P98164 4655 aa5.23□□□□□ -1.57
HERC4-214ENST00000513996 TRAV12-1A0A0B4J245 112 aa5.22□□□□□ -1.57
HERC4-214ENST00000513996 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
HERC4-214ENST00000513996 FABP4P15090 132 aa5.22□□□□□ -1.57
HERC4-214ENST00000513996 AKR1D1P51857 326 aa5.22□□□□□ -1.57
HERC4-214ENST00000513996 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
HERC4-214ENST00000513996 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
HERC4-214ENST00000513996 LEPROTL1O95214 131 aa5.21□□□□□ -1.58
HERC4-214ENST00000513996 VPREB1P12018 145 aa5.21□□□□□ -1.58
HERC4-214ENST00000513996 IGLV1-50A0A075B6I6 118 aa5.2□□□□□ -1.58
HERC4-214ENST00000513996 BCE1O60756 84 aa5.2□□□□□ -1.58
HERC4-214ENST00000513996 JOSD1Q15040 202 aaPredicted RBP5.2□□□□□ -1.58
HERC4-214ENST00000513996 PCP4P48539 62 aa5.19□□□□□ -1.58
HERC4-214ENST00000513996 COX17Q14061 63 aa5.19□□□□□ -1.58
HERC4-214ENST00000513996 PET117Q6UWS5 81 aa5.19□□□□□ -1.58
HERC4-214ENST00000513996 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
HERC4-214ENST00000513996 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
HERC4-214ENST00000513996 MAP1LC3CQ9BXW4 147 aa5.19□□□□□ -1.58
HERC4-214ENST00000513996 IGKV2-28A0A075B6P5 120 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 A0A0U1RRA0 63 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 SYS1-DBNDD2H3BUS1 97 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 IGKV2D-28P01615 120 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 C3orf79P0CE67 100 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 SMIM6P0DI80 62 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 LINC00158P58513 81 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
HERC4-214ENST00000513996 TMEM238C9JI98 176 aa5.17□□□□□ -1.58
HERC4-214ENST00000513996 H0Y8G0 127 aa5.17□□□□□ -1.58
HERC4-214ENST00000513996 SMIM13P0DJ93 91 aa5.17□□□□□ -1.58
HERC4-214ENST00000513996 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
HERC4-214ENST00000513996 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
HERC4-214ENST00000513996 A0A087X002 238 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 C20orf202A1L168 122 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 M0R378 163 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 TSPEAR-AS2P59090 65 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 KRTDAPP60985 99 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 PYY3Q5JQD4 70 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 LINC01545Q5VT33 79 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 SFTA2Q6UW10 78 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 PMCHL2Q9BQD1 86 aa5.16□□□□□ -1.58
HERC4-214ENST00000513996 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
HERC4-214ENST00000513996 UBE2AP49459 152 aa5.15□□□□□ -1.59
HERC4-214ENST00000513996 RPL24P83731 157 aaKnown RBP5.15□□□□□ -1.59
HERC4-214ENST00000513996 LINC00518Q8N0U6 118 aa5.15□□□□□ -1.59
HERC4-214ENST00000513996 TMEM126AQ9H061 195 aa5.15□□□□□ -1.59
HERC4-214ENST00000513996 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.59
HERC4-214ENST00000513996 LPAP08519 4548 aa5.15□□□□□ -1.59
HERC4-214ENST00000513996 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
HERC4-214ENST00000513996 PRLHP81277 87 aa5.14□□□□□ -1.59
HERC4-214ENST00000513996 MIR7-3HGQ8N6C7 128 aa5.14□□□□□ -1.59
HERC4-214ENST00000513996 LEPROTO15243 131 aa5.13□□□□□ -1.59
HERC4-214ENST00000513996 HERV-K104P63124 156 aa5.13□□□□□ -1.59
HERC4-214ENST00000513996 KRTAP13-2Q52LG2 175 aa5.13□□□□□ -1.59
HERC4-214ENST00000513996 MEIG1Q5JSS6 88 aa5.13□□□□□ -1.59
HERC4-214ENST00000513996 FAM19A1Q7Z5A9 133 aa5.13□□□□□ -1.59
HERC4-214ENST00000513996 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms