RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 M0R3E3 92 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 GDF5OSQ5U4N7 250 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 BAGE3Q86Y29 109 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 BAGE2Q86Y30 109 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 C22orf24Q9Y442 160 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 TRAV40A0A0B4J280 105 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 LRCOL1A6NCL2 159 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 WT1-ASQ06250 92 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 KRTAP1-3Q8IUG1 177 aa3.72□□□□□ -1.81
TRAPPC11-209ENST00000512476 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 PLGLAQ15195 96 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 PRR34Q9NV39 138 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 SNURFQ9Y675 71 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 FBN2P35556 2912 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 MYO18BQ8IUG5 2567 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 PRH1P02810 166 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 SERF2P84101 59 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 BRD3OSQ6XYD6 125 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 MAPK1IP1LQ8NDC0 245 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 GNG13Q9P2W3 67 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 ABCA2Q9BZC7 2435 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 AKAP6Q13023 2319 aa3.71□□□□□ -1.82
TRAPPC11-209ENST00000512476 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 PSCAO43653 123 aa3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 SPTAN1Q13813 2472 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 IGLV4-69A0A075B6H9 119 aa3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 FXYD3Q14802 87 aa3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 PSMG4Q5JS54 123 aa3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 MRPL36Q9P0J6 103 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-209ENST00000512476 IGKV3-7A0A075B6H7 116 aa3.69□□□□□ -1.82
TRAPPC11-209ENST00000512476 TRAV23DV6A0A075B6W5 121 aa3.69□□□□□ -1.82
TRAPPC11-209ENST00000512476 APELAP0DMC3 54 aa3.69□□□□□ -1.82
TRAPPC11-209ENST00000512476 UTP20O75691 2785 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-209ENST00000512476 IGKV1-17P01599 117 aa3.69□□□□□ -1.82
TRAPPC11-209ENST00000512476 IGHV3-33P01772 117 aa3.69□□□□□ -1.82
TRAPPC11-209ENST00000512476 TNCP24821 2201 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 CHD6Q8TD26 2715 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 BCE1O60756 84 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 C5orf56Q8N8D9 126 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 LRRK2Q5S007 2527 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 CTXND1A0A1B0GTU2 59 aa3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 USP9YO00507 2555 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC11-209ENST00000512476 TRBV10-1A0A0K0K1A3 114 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 H3BUX3 64 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 I3L2K1 104 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 UBE2D4Q9Y2X8 147 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 TENM4Q6N022 2769 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 K7EIM0 57 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 CTSGP08311 255 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 LY6EQ16553 131 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 DEFB112Q30KQ8 113 aa3.67□□□□□ -1.82
TRAPPC11-209ENST00000512476 DOPEY2Q9Y3R5 2298 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 CRYBG3Q68DQ2 2970 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 SPG11Q96JI7 2443 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 WNK2Q9Y3S1 2297 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 A0A087WVE0 104 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 PPP1R17O96001 155 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 LOC101927531A0A1B0GV80 90 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 PDE6HQ13956 83 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 KLK9Q2XQG4 91 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 KLK9Q9UKQ9 250 aa3.66□□□□□ -1.82
TRAPPC11-209ENST00000512476 CSMD2Q7Z408 3487 aa3.65□□□□□ -1.82
TRAPPC11-209ENST00000512476 G3V318 75 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 C2orf82Q6UX34 121 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 PRRC2AP48634 2157 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 CELSR2Q9HCU4 2923 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 PTPN13Q12923 2485 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 NAV3Q8IVL0 2385 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 ARMS2P0C7Q2 107 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 ARL14EPLP0DKL9 152 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 KRTAP1-1Q07627 177 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 C1orf137Q5JT78 98 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 LYPD1Q8N2G4 141 aa3.65□□□□□ -1.83
TRAPPC11-209ENST00000512476 ASH1LQ9NR48 2969 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.64□□□□□ -1.831e-6■■■■□ 23.8
TRAPPC11-209ENST00000512476 A0A0G2JQZ4 141 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 NUPR2A6NF83 97 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 COX6CP09669 75 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 C10orf113Q5VZT2 155 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 GFRA4Q9GZZ7 299 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 TACC2O95359 2948 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 VPS13CQ709C8 3753 aa3.64□□□□□ -1.83
TRAPPC11-209ENST00000512476 POLQO75417 2590 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 APCP25054 2843 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 IGKV3D-7A0A0C4DH55 119 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 IGKV3OR2-268A0A0C4DH90 116 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 NAV2Q8IVL1 2488 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 Q6JHZ5 121 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 SPACA4Q8TDM5 124 aa3.63□□□□□ -1.83
TRAPPC11-209ENST00000512476 PDZD2O15018 2839 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 D6R8Y8 96 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 H3BUA1 57 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 HRES1P13985 223 aa3.62□□□□□ -1.83
TRAPPC11-209ENST00000512476 MUSTN1Q8IVN3 82 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms