RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 VPREB1P12018 145 aa6.97□□□□□ -1.29
DDX41-215ENST00000512431 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
DDX41-215ENST00000512431 PFN2P35080 140 aa6.97□□□□□ -1.29
DDX41-215ENST00000512431 SVBPQ8N300 66 aa6.97□□□□□ -1.29
DDX41-215ENST00000512431 YPEL4Q96NS1 127 aa6.97□□□□□ -1.29
DDX41-215ENST00000512431 M0R2T5 61 aa6.96□□□□□ -1.3
DDX41-215ENST00000512431 SNAPINO95295 136 aa6.96□□□□□ -1.3
DDX41-215ENST00000512431 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
DDX41-215ENST00000512431 SLC25A20O43772 301 aa6.95□□□□□ -1.3
DDX41-215ENST00000512431 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
DDX41-215ENST00000512431 ATP5L2Q7Z4Y8 100 aa6.95□□□□□ -1.3
DDX41-215ENST00000512431 TIMM17AQ99595 171 aa6.95□□□□□ -1.3
DDX41-215ENST00000512431 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
DDX41-215ENST00000512431 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
DDX41-215ENST00000512431 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
DDX41-215ENST00000512431 Q8N377 158 aa6.94□□□□□ -1.3
DDX41-215ENST00000512431 SND1-IT1Q9HBX3 110 aa6.94□□□□□ -1.3
DDX41-215ENST00000512431 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
DDX41-215ENST00000512431 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
DDX41-215ENST00000512431 TRAV9-1A0A075B6T8 112 aa6.92□□□□□ -1.3
DDX41-215ENST00000512431 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
DDX41-215ENST00000512431 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
DDX41-215ENST00000512431 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 H3BRM9 83 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 S100PP25815 95 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 COX17Q14061 63 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 ERASQ7Z444 233 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
DDX41-215ENST00000512431 PCOTHQ58A44 107 aa6.9□□□□□ -1.3
DDX41-215ENST00000512431 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.3
DDX41-215ENST00000512431 SMCR5Q8TEV8 140 aa6.9□□□□□ -1.3
DDX41-215ENST00000512431 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
DDX41-215ENST00000512431 IGLV9-49A0A0B4J1Y8 123 aa6.89□□□□□ -1.31
DDX41-215ENST00000512431 ATP6V1G1O75348 118 aa6.89□□□□□ -1.31
DDX41-215ENST00000512431 MOBPQ13875 183 aa6.89□□□□□ -1.31
DDX41-215ENST00000512431 KIAA1644Q3SXP7 199 aa6.89□□□□□ -1.31
DDX41-215ENST00000512431 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
DDX41-215ENST00000512431 SMCO4Q9NRQ5 59 aa6.87□□□□□ -1.31
DDX41-215ENST00000512431 ETDCA0A1B0GVM5 59 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 COLCA2A8K830 154 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 PRYO14603 147 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 Q8NDZ9 215 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 ZNF625Q96I27 306 aaPredicted RBP6.86□□□□□ -1.31
DDX41-215ENST00000512431 CST9LQ9H4G1 147 aa6.86□□□□□ -1.31
DDX41-215ENST00000512431 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
DDX41-215ENST00000512431 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
DDX41-215ENST00000512431 PMVKQ15126 192 aa6.84□□□□□ -1.31
DDX41-215ENST00000512431 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
DDX41-215ENST00000512431 LINC00158P58513 81 aa6.83□□□□□ -1.32
DDX41-215ENST00000512431 COX19Q49B96 90 aa6.83□□□□□ -1.32
DDX41-215ENST00000512431 TRAPPC1Q9Y5R8 145 aa6.83□□□□□ -1.32
DDX41-215ENST00000512431 IGLV5-39A0A0G2JS06 123 aa6.82□□□□□ -1.32
DDX41-215ENST00000512431 S100A12P80511 92 aa6.82□□□□□ -1.32
DDX41-215ENST00000512431 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
DDX41-215ENST00000512431 S100A1P23297 94 aa6.81□□□□□ -1.32
DDX41-215ENST00000512431 SPRR1AP35321 89 aa6.81□□□□□ -1.32
DDX41-215ENST00000512431 KCNQ1DNQ9H478 68 aa6.81□□□□□ -1.32
DDX41-215ENST00000512431 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
DDX41-215ENST00000512431 TRGC2P03986 189 aa6.8□□□□□ -1.32
DDX41-215ENST00000512431 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
DDX41-215ENST00000512431 C18orf32Q8TCD1 76 aa6.8□□□□□ -1.32
DDX41-215ENST00000512431 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
DDX41-215ENST00000512431 NCR3O14931 201 aa6.78□□□□□ -1.32
DDX41-215ENST00000512431 IGLC3P0DOY3 106 aa6.78□□□□□ -1.32
DDX41-215ENST00000512431 NDUFA6P56556 154 aa6.78□□□□□ -1.32
DDX41-215ENST00000512431 A0A0U1RRA0 63 aa6.77□□□□□ -1.33
DDX41-215ENST00000512431 KRTAP4-16G5E9R7 235 aaPredicted RBP6.77□□□□□ -1.33
DDX41-215ENST00000512431 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
DDX41-215ENST00000512431 LIMD2Q9BT23 127 aa6.77□□□□□ -1.33
DDX41-215ENST00000512431 A0A096LNJ9 63 aa6.76□□□□□ -1.33
DDX41-215ENST00000512431 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
DDX41-215ENST00000512431 ZNF22P17026 224 aaPredicted RBP6.76□□□□□ -1.33
DDX41-215ENST00000512431 LINC00310P59036 64 aa6.76□□□□□ -1.33
DDX41-215ENST00000512431 B5MCH6 92 aa6.75□□□□□ -1.33
DDX41-215ENST00000512431 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
DDX41-215ENST00000512431 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
DDX41-215ENST00000512431 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
DDX41-215ENST00000512431 TMEM170BQ5T4T1 132 aa6.73□□□□□ -1.33
DDX41-215ENST00000512431 FA2HQ7L5A8 372 aa6.73□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 LINC00614P0C842 121 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
DDX41-215ENST00000512431 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
DDX41-215ENST00000512431 MEIG1Q5JSS6 88 aa6.71□□□□□ -1.34
DDX41-215ENST00000512431 Q9BRP9 147 aa6.71□□□□□ -1.34
DDX41-215ENST00000512431 SERF1AO75920 110 aa6.7□□□□□ -1.34
DDX41-215ENST00000512431 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
DDX41-215ENST00000512431 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms