RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
NEK1-208ENST00000512193 LOC107984640A0A0U1RRK4 108 aa5.59□□□□□ -1.51
NEK1-208ENST00000512193 HELZ2Q9BYK8 2649 aaKnown RBP5.59□□□□□ -1.51
NEK1-208ENST00000512193 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
NEK1-208ENST00000512193 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
NEK1-208ENST00000512193 Q6ZVQ6 151 aa5.58□□□□□ -1.52
NEK1-208ENST00000512193 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
NEK1-208ENST00000512193 NDUFC1O43677 76 aa5.58□□□□□ -1.52
NEK1-208ENST00000512193 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
NEK1-208ENST00000512193 A0A0U1RQV1 116 aa5.57□□□□□ -1.52
NEK1-208ENST00000512193 LRCOL1A6NCL2 159 aa5.57□□□□□ -1.52
NEK1-208ENST00000512193 FSHBP01225 129 aa5.56□□□□□ -1.52
NEK1-208ENST00000512193 LINC01561Q8N1V8 128 aa5.56□□□□□ -1.52
NEK1-208ENST00000512193 X6R8D5 127 aa5.56□□□□□ -1.52
NEK1-208ENST00000512193 HRCT1Q6UXD1 115 aa5.56□□□□□ -1.52
NEK1-208ENST00000512193 SPINK6Q6UWN8 80 aa5.56□□□□□ -1.52
NEK1-208ENST00000512193 Q8N9L7 120 aa5.56□□□□□ -1.52
NEK1-208ENST00000512193 LINC01547P58512 204 aaPredicted RBP5.55□□□□□ -1.52
NEK1-208ENST00000512193 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
NEK1-208ENST00000512193 ZNF575Q86XF7 245 aa5.55□□□□□ -1.52
NEK1-208ENST00000512193 FRYLO94915 3013 aa5.55□□□□□ -1.52
NEK1-208ENST00000512193 C2orf48Q96LS8 159 aa5.54□□□□□ -1.52
NEK1-208ENST00000512193 IGLV9-49A0A0B4J1Y8 123 aa5.54□□□□□ -1.52
NEK1-208ENST00000512193 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
NEK1-208ENST00000512193 C6orf48Q9UBA6 75 aa5.54□□□□□ -1.52
NEK1-208ENST00000512193 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
NEK1-208ENST00000512193 DEFB116Q30KQ4 102 aa5.53□□□□□ -1.52
NEK1-208ENST00000512193 TEP1Q99973 2627 aaKnown RBP5.53□□□□□ -1.52
NEK1-208ENST00000512193 ESRGQ1W209 222 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 SMIM26A0A096LP01 95 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
NEK1-208ENST00000512193 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 SPATA3Q8NHX4 192 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 A0A087WSZ3 146 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 LINC00208Q96KT6 92 aa5.52□□□□□ -1.53
NEK1-208ENST00000512193 MRPL55Q7Z7F7 128 aaKnown RBP5.51□□□□□ -1.53
NEK1-208ENST00000512193 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
NEK1-208ENST00000512193 BOD1L1Q8NFC6 3051 aa5.51□□□□□ -1.53
NEK1-208ENST00000512193 SPEGQ15772 3267 aa5.51□□□□□ -1.53
NEK1-208ENST00000512193 C7orf33Q8WU49 177 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 KALRNO60229 2985 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 PRLHP81277 87 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 TMEM254Q8TBM7 123 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 KIAA0087Q14695 138 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 TEX15Q9BXT5 2789 aa5.5□□□□□ -1.53
NEK1-208ENST00000512193 GCN1Q92616 2671 aaKnown RBP5.49□□□□□ -1.53
NEK1-208ENST00000512193 A0A096LNT2 108 aa5.49□□□□□ -1.53
NEK1-208ENST00000512193 ADGRG4Q8IZF6 3080 aa5.49□□□□□ -1.53
NEK1-208ENST00000512193 PRYO14603 147 aa5.49□□□□□ -1.53
NEK1-208ENST00000512193 C22orf24Q9Y442 160 aa5.49□□□□□ -1.53
NEK1-208ENST00000512193 SMCR5Q8TEV8 140 aa5.49□□□□□ -1.53
NEK1-208ENST00000512193 GIG44P09565 113 aaPredicted RBP5.48□□□□□ -1.53
NEK1-208ENST00000512193 Q8NAQ8 132 aa5.48□□□□□ -1.53
NEK1-208ENST00000512193 CSNK1G2-AS1Q8NCQ2 148 aa5.48□□□□□ -1.53
NEK1-208ENST00000512193 CRYGAP11844 174 aa5.48□□□□□ -1.53
NEK1-208ENST00000512193 Q9BRP9 147 aa5.48□□□□□ -1.53
NEK1-208ENST00000512193 LINC01556Q5JQF7 62 aa5.47□□□□□ -1.53
NEK1-208ENST00000512193 CXCL6P80162 114 aa5.47□□□□□ -1.53
NEK1-208ENST00000512193 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
NEK1-208ENST00000512193 Q6ZQT0 140 aa5.47□□□□□ -1.53
NEK1-208ENST00000512193 COL6A3P12111 3177 aa5.46□□□□□ -1.53
NEK1-208ENST00000512193 F8WDY8 70 aa5.46□□□□□ -1.54
NEK1-208ENST00000512193 LINC00474Q9P2X8 69 aa5.46□□□□□ -1.54
NEK1-208ENST00000512193 NOTCH1P46531 2555 aa5.46□□□□□ -1.54
NEK1-208ENST00000512193 NBEAL2Q6ZNJ1 2754 aa5.46□□□□□ -1.54
NEK1-208ENST00000512193 UNC79Q9P2D8 2635 aa5.46□□□□□ -1.54
NEK1-208ENST00000512193 ATMQ13315 3056 aa5.46□□□□□ -1.54
NEK1-208ENST00000512193 NHLRC4P0CG21 123 aaPredicted RBP5.45□□□□□ -1.54
NEK1-208ENST00000512193 LY6G6CO95867 125 aa5.45□□□□□ -1.54
NEK1-208ENST00000512193 ELOF1P60002 83 aaKnown RBP5.45□□□□□ -1.54
NEK1-208ENST00000512193 CASC2Q6XLA1 102 aa5.45□□□□□ -1.54
NEK1-208ENST00000512193 C19orf73Q9NVV2 129 aa5.45□□□□□ -1.54
NEK1-208ENST00000512193 ZNF706Q9Y5V0 76 aaPredicted RBP5.45□□□□□ -1.54
NEK1-208ENST00000512193 DMXL2Q8TDJ6 3036 aa5.44□□□□□ -1.54
NEK1-208ENST00000512193 UBR5O95071 2799 aaPredicted RBP5.44□□□□□ -1.54
NEK1-208ENST00000512193 CFAP47Q6ZTR5 3102 aa5.44□□□□□ -1.54
NEK1-208ENST00000512193 A6NED7 52 aa5.44□□□□□ -1.54
NEK1-208ENST00000512193 V9GYY9 64 aa5.44□□□□□ -1.54
NEK1-208ENST00000512193 TACC2O95359 2948 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 SMIM29Q86T20 159 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 FLNCQ14315 2725 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 STAB1Q9NY15 2570 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 TRBV7-6A0A0J9YX20 115 aa5.43□□□□□ -1.54
NEK1-208ENST00000512193 HCG22E2RYF7 251 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 PSPHP1O15172 72 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 VPREB1P12018 145 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 Q6ZRP5 223 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 ST20-AS1Q8NBB2 130 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 TM2D3Q9BRN9 247 aa5.42□□□□□ -1.54
NEK1-208ENST00000512193 LOC110117498A0A087WWA1 95 aa5.41□□□□□ -1.54
NEK1-208ENST00000512193 H3BNG1 76 aa5.41□□□□□ -1.54
NEK1-208ENST00000512193 IGLV6-57P01721 117 aa5.41□□□□□ -1.54
NEK1-208ENST00000512193 C9orf129Q5T035 196 aaKnown RBP5.41□□□□□ -1.54
NEK1-208ENST00000512193 H0Y9P7 68 aa5.41□□□□□ -1.54
NEK1-208ENST00000512193 KRTAP24-1Q3LI83 254 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms