RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 LINC00587B1AMM8 73 aa11.88□□□□□ -0.51
LMNA-221ENST00000506981 IGLV7-43P04211 117 aa11.88□□□□□ -0.51
LMNA-221ENST00000506981 KRTAP11-1Q8IUC1 163 aa11.88□□□□□ -0.51
LMNA-221ENST00000506981 IGLV5-37A0A075B6J1 123 aa11.87□□□□□ -0.51
LMNA-221ENST00000506981 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
LMNA-221ENST00000506981 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
LMNA-221ENST00000506981 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.51
LMNA-221ENST00000506981 PET117Q6UWS5 81 aa11.87□□□□□ -0.51
LMNA-221ENST00000506981 J3QQQ9 107 aa11.86□□□□□ -0.51
LMNA-221ENST00000506981 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
LMNA-221ENST00000506981 SMIM13P0DJ93 91 aa11.85□□□□□ -0.51
LMNA-221ENST00000506981 GAGE10A6NGK3 116 aa11.84□□□□□ -0.51
LMNA-221ENST00000506981 NMUP48645 174 aa11.84□□□□□ -0.51
LMNA-221ENST00000506981 TSPEAR-AS2P59090 65 aa11.84□□□□□ -0.51
LMNA-221ENST00000506981 DIRC1Q969H9 104 aa11.84□□□□□ -0.51
LMNA-221ENST00000506981 LINC00167Q96N53 147 aa11.84□□□□□ -0.51
LMNA-221ENST00000506981 C3orf79P0CE67 100 aa11.83□□□□□ -0.52
LMNA-221ENST00000506981 KRTDAPP60985 99 aa11.83□□□□□ -0.52
LMNA-221ENST00000506981 LINC01545Q5VT33 79 aa11.83□□□□□ -0.52
LMNA-221ENST00000506981 RPL37AP8A6NKH3 93 aa11.82□□□□□ -0.52
LMNA-221ENST00000506981 VPREB1P12018 145 aa11.82□□□□□ -0.52
LMNA-221ENST00000506981 C20orf202A1L168 122 aa11.81□□□□□ -0.52
LMNA-221ENST00000506981 E9PLD3 99 aa11.8□□□□□ -0.52
LMNA-221ENST00000506981 MIR7-3HGQ8N6C7 128 aa11.8□□□□□ -0.52
LMNA-221ENST00000506981 LRP1Q07954 4544 aaKnown RBP11.8□□□□□ -0.52
LMNA-221ENST00000506981 FAT3Q8TDW7 4589 aa11.79□□□□□ -0.52
LMNA-221ENST00000506981 H0Y9J4 135 aa11.78□□□□□ -0.52
LMNA-221ENST00000506981 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
LMNA-221ENST00000506981 IGKV2-28A0A075B6P5 120 aa11.77□□□□□ -0.53
LMNA-221ENST00000506981 BCE1O60756 84 aa11.77□□□□□ -0.53
LMNA-221ENST00000506981 IGKV2D-28P01615 120 aa11.77□□□□□ -0.53
LMNA-221ENST00000506981 S100A6P06703 90 aa11.76□□□□□ -0.53
LMNA-221ENST00000506981 S100A2P29034 98 aa11.76□□□□□ -0.53
LMNA-221ENST00000506981 BOD1L2Q8IYS8 172 aa11.76□□□□□ -0.53
LMNA-221ENST00000506981 ZNF861PO60384 105 aa11.75□□□□□ -0.53
LMNA-221ENST00000506981 RPL28P46779 137 aaKnown RBP11.75□□□□□ -0.53
LMNA-221ENST00000506981 AKR1D1P51857 326 aa11.75□□□□□ -0.53
LMNA-221ENST00000506981 MT1HL1P0DM35 61 aa11.74□□□□□ -0.53
LMNA-221ENST00000506981 MIEN1Q9BRT3 115 aa11.74□□□□□ -0.53
LMNA-221ENST00000506981 IGLV1-50A0A075B6I6 118 aa11.73□□□□□ -0.53
LMNA-221ENST00000506981 M0R378 163 aa11.73□□□□□ -0.53
LMNA-221ENST00000506981 Q8NDZ9 215 aa11.73□□□□□ -0.53
LMNA-221ENST00000506981 UBE2AP49459 152 aa11.72□□□□□ -0.53
LMNA-221ENST00000506981 DAND5Q8N907 189 aa11.72□□□□□ -0.53
LMNA-221ENST00000506981 A0A0J9YXY3 114 aa11.71□□□□□ -0.53
LMNA-221ENST00000506981 NCR3O14931 201 aa11.71□□□□□ -0.53
LMNA-221ENST00000506981 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
LMNA-221ENST00000506981 IGKV2D-26A0A0A0MRZ7 120 aa11.69□□□□□ -0.54
LMNA-221ENST00000506981 ZNF815PA8K554 130 aa11.69□□□□□ -0.54
LMNA-221ENST00000506981 TMEM126AQ9H061 195 aa11.69□□□□□ -0.54
LMNA-221ENST00000506981 HERC1Q15751 4861 aa11.69□□□□□ -0.54
LMNA-221ENST00000506981 HIST1H2BLQ99880 126 aa11.68□□□□□ -0.54
LMNA-221ENST00000506981 LOC107984156A0A0G2JMH3 177 aa11.67□□□□□ -0.54
LMNA-221ENST00000506981 TMEM238C9JI98 176 aa11.67□□□□□ -0.54
LMNA-221ENST00000506981 S100A12P80511 92 aa11.67□□□□□ -0.54
LMNA-221ENST00000506981 FAM19A1Q7Z5A9 133 aa11.67□□□□□ -0.54
LMNA-221ENST00000506981 ARL17AQ8IVW1 177 aa11.67□□□□□ -0.54
LMNA-221ENST00000506981 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
LMNA-221ENST00000506981 PRYO14603 147 aa11.64□□□□□ -0.55
LMNA-221ENST00000506981 TIMM17BO60830 172 aa11.64□□□□□ -0.55
LMNA-221ENST00000506981 KRTAP10-8P60410 259 aa11.64□□□□□ -0.55
LMNA-221ENST00000506981 NPC2P61916 151 aa11.64□□□□□ -0.55
LMNA-221ENST00000506981 PRLHP81277 87 aa11.63□□□□□ -0.55
LMNA-221ENST00000506981 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
LMNA-221ENST00000506981 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 NDUFC2O95298 119 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
LMNA-221ENST00000506981 ANKRD39Q53RE8 183 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 ADAMTSL4-AS1Q5T5F5 129 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 KRTAP13-1Q8IUC0 172 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 PRR26Q8N8Z3 221 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 TTTY13Q9BZ97 58 aa11.62□□□□□ -0.55
LMNA-221ENST00000506981 KRTAP1-4P0C5Y4 121 aa11.61□□□□□ -0.55
LMNA-221ENST00000506981 SCGB1D4Q6XE38 83 aa11.61□□□□□ -0.55
LMNA-221ENST00000506981 TRBV10-3A0A0K0K1G6 114 aa11.6□□□□□ -0.55
LMNA-221ENST00000506981 RPL13AP40429 203 aaKnown RBP11.6□□□□□ -0.55
LMNA-221ENST00000506981 HSBP1L1C9JCN9 74 aa11.59□□□□□ -0.55
LMNA-221ENST00000506981 DDTP30046 118 aa11.59□□□□□ -0.55
LMNA-221ENST00000506981 S100A7L2Q5SY68 101 aa11.59□□□□□ -0.55
LMNA-221ENST00000506981 KCNQ1DNQ9H478 68 aa11.59□□□□□ -0.55
LMNA-221ENST00000506981 ETDCA0A1B0GVM5 59 aa11.58□□□□□ -0.56
LMNA-221ENST00000506981 SOSTDC1Q6X4U4 206 aa11.58□□□□□ -0.56
LMNA-221ENST00000506981 LITAFQ99732 161 aa11.58□□□□□ -0.56
LMNA-221ENST00000506981 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
LMNA-221ENST00000506981 LINC00337Q8N6G1 96 aa11.56□□□□□ -0.56
LMNA-221ENST00000506981 HIGD2AQ9BW72 106 aa11.56□□□□□ -0.56
LMNA-221ENST00000506981 SPANXCQ9NY87 97 aa11.56□□□□□ -0.56
LMNA-221ENST00000506981 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
LMNA-221ENST00000506981 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
LMNA-221ENST00000506981 SPRR1AP35321 89 aa11.54□□□□□ -0.56
LMNA-221ENST00000506981 TNXBP22105 4242 aa11.53□□□□□ -0.56
LMNA-221ENST00000506981 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
LMNA-221ENST00000506981 SCGB1D1O95968 90 aa11.53□□□□□ -0.56
LMNA-221ENST00000506981 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
LMNA-221ENST00000506981 SPANXDQ9BXN6 97 aa11.53□□□□□ -0.56
LMNA-221ENST00000506981 CBY1Q9Y3M2 126 aa11.53□□□□□ -0.56
LMNA-221ENST00000506981 CRYGAP11844 174 aa11.52□□□□□ -0.57
LMNA-221ENST00000506981 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
LMNA-221ENST00000506981 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
LMNA-221ENST00000506981 Q6ZVH6 145 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms