RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
SMN1-204ENST00000506163 LINC00167Q96N53 147 aa10.86□□□□□ -0.67
SMN1-204ENST00000506163 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
SMN1-204ENST00000506163 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
SMN1-204ENST00000506163 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 IGKCP01834 107 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 S100A1P23297 94 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 LBHQ53QV2 105 aaPredicted RBP10.84□□□□□ -0.67
SMN1-204ENST00000506163 LINC01600Q96MT4 127 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
SMN1-204ENST00000506163 LEPROTO15243 131 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 SMIM13P0DJ93 91 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 VPREB1P12018 145 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 LINC00158P58513 81 aa10.83□□□□□ -0.68
SMN1-204ENST00000506163 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
SMN1-204ENST00000506163 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
SMN1-204ENST00000506163 J3QQQ9 107 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 HERV-K104P63124 156 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
SMN1-204ENST00000506163 MYMXA0A1B0GTQ4 84 aa10.78□□□□□ -0.68
SMN1-204ENST00000506163 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
SMN1-204ENST00000506163 H0Y9J4 135 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 PET117Q6UWS5 81 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 DIRC1Q969H9 104 aa10.77□□□□□ -0.68
SMN1-204ENST00000506163 HERVK_113P61574 105 aa10.76□□□□□ -0.69
SMN1-204ENST00000506163 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 ZNF861PO60384 105 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 LOC100996750A0A140TA64 210 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 E9PLD3 99 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 BCE1O60756 84 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
SMN1-204ENST00000506163 KRTAP4-6Q9BYQ5 205 aa10.75□□□□□ -0.69
SMN1-204ENST00000506163 DAND5Q8N907 189 aa10.74□□□□□ -0.69
SMN1-204ENST00000506163 LGALS3P17931 250 aaKnown RBP10.73□□□□□ -0.69
SMN1-204ENST00000506163 KRTDAPP60985 99 aa10.73□□□□□ -0.69
SMN1-204ENST00000506163 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 NMUP48645 174 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 KRTAP13-1Q8IUC0 172 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 BOD1L2Q8IYS8 172 aa10.72□□□□□ -0.69
SMN1-204ENST00000506163 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 CTAG1AP78358 180 aa10.71□□□□□ -0.69
SMN1-204ENST00000506163 ADAMTSL4-AS1Q5T5F5 129 aa10.7□□□□□ -0.7
SMN1-204ENST00000506163 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 M0R378 163 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
SMN1-204ENST00000506163 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
SMN1-204ENST00000506163 HIST3H2BBQ8N257 126 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 TTTY13Q9BZ97 58 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 TMEM126AQ9H061 195 aa10.68□□□□□ -0.7
SMN1-204ENST00000506163 NCR3O14931 201 aa10.67□□□□□ -0.7
SMN1-204ENST00000506163 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
SMN1-204ENST00000506163 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
SMN1-204ENST00000506163 PRLHP81277 87 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 LITAFQ99732 161 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
SMN1-204ENST00000506163 UBE2AP49459 152 aa10.64□□□□□ -0.71
SMN1-204ENST00000506163 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
SMN1-204ENST00000506163 NPC2P61916 151 aa10.62□□□□□ -0.71
SMN1-204ENST00000506163 FAM19A1Q7Z5A9 133 aa10.62□□□□□ -0.71
SMN1-204ENST00000506163 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
SMN1-204ENST00000506163 ANAPC11Q9NYG5 84 aa10.61□□□□□ -0.71
SMN1-204ENST00000506163 C20orf202A1L168 122 aa10.6□□□□□ -0.71
SMN1-204ENST00000506163 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
SMN1-204ENST00000506163 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
SMN1-204ENST00000506163 A0A087X002 238 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 S100A2P29034 98 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 SPRR1AP35321 89 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
SMN1-204ENST00000506163 TRBV10-2A0A0K0K1G8 114 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
SMN1-204ENST00000506163 TIMM17BO60830 172 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 S100A6P06703 90 aa10.58□□□□□ -0.72
SMN1-204ENST00000506163 PRYO14603 147 aa10.57□□□□□ -0.72
SMN1-204ENST00000506163 NDUFC2O95298 119 aa10.57□□□□□ -0.72
SMN1-204ENST00000506163 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
SMN1-204ENST00000506163 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
SMN1-204ENST00000506163 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
SMN1-204ENST00000506163 SPANXB1Q9NS25 103 aaPredicted RBP10.56□□□□□ -0.72
SMN1-204ENST00000506163 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
SMN1-204ENST00000506163 IGLV6-57P01721 117 aa10.54□□□□□ -0.72
SMN1-204ENST00000506163 DDTP30046 118 aa10.54□□□□□ -0.72
SMN1-204ENST00000506163 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
SMN1-204ENST00000506163 KRTAP13-2Q52LG2 175 aa10.52□□□□□ -0.73
SMN1-204ENST00000506163 HIGD2AQ9BW72 106 aa10.52□□□□□ -0.73
SMN1-204ENST00000506163 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms