RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TPRXLQ17RH7 258 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 ORMDL2Q53FV1 153 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 Q8NDZ9 215 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 COX7B2Q8TF08 81 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 ATP6V1G1O75348 118 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 SPINK8P0C7L1 97 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 UBE2AP49459 152 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 KIAA1644Q3SXP7 199 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 FAM229BQ4G0N7 80 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 C3orf22Q8N5N4 141 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 TOMM6Q96B49 74 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
GYPB-205ENST00000505583 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
GYPB-205ENST00000505583 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 K7EMI3 77 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 CXCL5P42830 114 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 SEC11AP67812 179 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 ERASQ7Z444 233 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 CST9LQ9H4G1 147 aa3.34□□□□□ -1.87
GYPB-205ENST00000505583 IGKV2D-26A0A0A0MRZ7 120 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 M0R378 163 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 PFN2P35080 140 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 FAM19A1Q7Z5A9 133 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 NKAPP1Q8N9T2 125 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
GYPB-205ENST00000505583 MT-ND4LP03901 98 aa3.32□□□□□ -1.88
GYPB-205ENST00000505583 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
GYPB-205ENST00000505583 ATP5LO75964 103 aa3.31□□□□□ -1.88
GYPB-205ENST00000505583 RAB14P61106 215 aa3.31□□□□□ -1.88
GYPB-205ENST00000505583 PMVKQ15126 192 aa3.31□□□□□ -1.88
GYPB-205ENST00000505583 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
GYPB-205ENST00000505583 DAND5Q8N907 189 aa3.31□□□□□ -1.88
GYPB-205ENST00000505583 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
GYPB-205ENST00000505583 A0A096LNJ9 63 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 ZNF22P17026 224 aaPredicted RBP3.3□□□□□ -1.88
GYPB-205ENST00000505583 G0S2P27469 103 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 HIGD2AQ9BW72 106 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 ERG28Q9UKR5 140 aa3.3□□□□□ -1.88
GYPB-205ENST00000505583 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
GYPB-205ENST00000505583 H3BRM9 83 aa3.29□□□□□ -1.88
GYPB-205ENST00000505583 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
GYPB-205ENST00000505583 C11orf86A6NJI1 115 aa3.28□□□□□ -1.88
GYPB-205ENST00000505583 NDUFA6P56556 154 aa3.28□□□□□ -1.88
GYPB-205ENST00000505583 CTAG1AP78358 180 aa3.28□□□□□ -1.88
GYPB-205ENST00000505583 PMCHL1Q16048 86 aa3.28□□□□□ -1.88
GYPB-205ENST00000505583 Q8NBF4 154 aa3.28□□□□□ -1.88
GYPB-205ENST00000505583 A0A0U1RRA0 63 aa3.27□□□□□ -1.89
GYPB-205ENST00000505583 RPL24P83731 157 aaKnown RBP3.27□□□□□ -1.89
GYPB-205ENST00000505583 COX17Q14061 63 aa3.27□□□□□ -1.89
GYPB-205ENST00000505583 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
GYPB-205ENST00000505583 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
GYPB-205ENST00000505583 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
GYPB-205ENST00000505583 FA2HQ7L5A8 372 aa3.27□□□□□ -1.89
GYPB-205ENST00000505583 GNB1LQ9BYB4 327 aa3.27□□□□□ -1.89
GYPB-205ENST00000505583 TRAV9-1A0A075B6T8 112 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 LINC01549A6NIU2 74 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
GYPB-205ENST00000505583 SPRR1AP35321 89 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 LINC01547P58512 204 aaPredicted RBP3.26□□□□□ -1.89
GYPB-205ENST00000505583 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 LINC00337Q8N6G1 96 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 SMCR5Q8TEV8 140 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 SMCO4Q9NRQ5 59 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
GYPB-205ENST00000505583 TMEM218A2RU14 115 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 NCR3O14931 201 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 ERC2-IT1O76042 136 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 LINC00158P58513 81 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 FABP9Q0Z7S8 132 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 TMEM170BQ5T4T1 132 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 BAGE3Q86Y29 109 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 Q8N377 158 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 C18orf32Q8TCD1 76 aa3.25□□□□□ -1.89
GYPB-205ENST00000505583 TRBV10-3A0A0K0K1G6 114 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 SPINK1P00995 79 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 HBDP02042 147 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 LINC00614P0C842 121 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 SMIM13P0DJ93 91 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 CLLU1Q5K131 121 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 BOD1L2Q8IYS8 172 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 KCNQ1DNQ9H478 68 aa3.24□□□□□ -1.89
GYPB-205ENST00000505583 ZNF706Q9Y5V0 76 aaPredicted RBP3.24□□□□□ -1.89
GYPB-205ENST00000505583 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
GYPB-205ENST00000505583 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
GYPB-205ENST00000505583 S100PP25815 95 aa3.23□□□□□ -1.89
GYPB-205ENST00000505583 MOBPQ13875 183 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms