RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 C9orf129Q5T035 196 aaKnown RBP3.12□□□□□ -1.91
LMNB1-208ENST00000504788 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 ATOH7Q8N100 152 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 TOMM7Q9P0U1 55 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.11□□□□□ -1.91
LMNB1-208ENST00000504788 A0A1W2PNN7 141 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 NDUFC2-KCTD14E9PQ53 114 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 J3QQQ9 107 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 LEPROTO15243 131 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 PTTG1IPP53801 180 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 HAMPP81172 84 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 C6orf226Q5I0X4 101 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 PLAC8Q9NZF1 115 aa3.11□□□□□ -1.91
LMNB1-208ENST00000504788 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 A0A087WYN8 130 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 LOC107984156A0A0G2JMH3 177 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 PCP4P48539 62 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 ARL17AQ8IVW1 177 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 TP73-AS1Q9UF72 201 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 NDUFA12Q9UI09 145 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
LMNB1-208ENST00000504788 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
LMNB1-208ENST00000504788 LOC107984640A0A0U1RRK4 108 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 FAM168BA1KXE4 195 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 SMIM6P0DI80 62 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 AKR1D1P51857 326 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 CKS1BP61024 79 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 COX17Q14061 63 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 ADAMTSL4-AS1Q5T5F5 129 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 KRTAP11-1Q8IUC1 163 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 PCP2Q8IVA1 136 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 ERG28Q9UKR5 140 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.91
LMNB1-208ENST00000504788 A0A0J9YXY3 114 aa3.09□□□□□ -1.92
LMNB1-208ENST00000504788 PRSS2P07478 247 aa3.09□□□□□ -1.92
LMNB1-208ENST00000504788 NMUP48645 174 aa3.09□□□□□ -1.92
LMNB1-208ENST00000504788 SERTAD4-AS1Q5TG53 156 aa3.09□□□□□ -1.92
LMNB1-208ENST00000504788 SOSTDC1Q6X4U4 206 aa3.09□□□□□ -1.92
LMNB1-208ENST00000504788 PLEKHB2Q96CS7 222 aa3.09□□□□□ -1.92
LMNB1-208ENST00000504788 IGKV2-24A0A0C4DH68 120 aa3.08□□□□□ -1.92
LMNB1-208ENST00000504788 HERV-K104P63124 156 aa3.08□□□□□ -1.92
LMNB1-208ENST00000504788 SFTA2Q6UW10 78 aa3.08□□□□□ -1.92
LMNB1-208ENST00000504788 SND1-IT1Q9HBX3 110 aa3.08□□□□□ -1.92
LMNB1-208ENST00000504788 XAGE1AQ9HD64 81 aa3.08□□□□□ -1.92
LMNB1-208ENST00000504788 PLA2G2DQ9UNK4 145 aa3.08□□□□□ -1.92
LMNB1-208ENST00000504788 IGLV5-37A0A075B6J1 123 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 MYMXA0A1B0GTQ4 84 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 C20orf202A1L168 122 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 SMIM13P0DJ93 91 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 VPREB1P12018 145 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 BOD1L2Q8IYS8 172 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 FAT3Q8TDW7 4589 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 A0A1B0GV90 55 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 TIMM17BO60830 172 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 SCGB1D1O95968 90 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 PFN2P35080 140 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 HERVK_113P61574 105 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 RPL18AQ02543 176 aaKnown RBP3.07□□□□□ -1.92
LMNB1-208ENST00000504788 GAGE2BQ13066 116 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 GAGE2EQ4V326 116 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 MIR7-3HGQ8N6C7 128 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 DAND5Q8N907 189 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 LINC00474Q9P2X8 69 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 GAGE2DQ9UEU5 116 aa3.07□□□□□ -1.92
LMNB1-208ENST00000504788 ZNF815PA8K554 130 aa3.06□□□□□ -1.92
LMNB1-208ENST00000504788 DLEU1O43261 78 aa3.06□□□□□ -1.92
LMNB1-208ENST00000504788 COX8AP10176 69 aa3.06□□□□□ -1.92
LMNB1-208ENST00000504788 LGALS3P17931 250 aaKnown RBP3.06□□□□□ -1.92
LMNB1-208ENST00000504788 C2orf91Q6ZV80 131 aa3.06□□□□□ -1.92
LMNB1-208ENST00000504788 Q8N1X5 172 aa3.06□□□□□ -1.92
LMNB1-208ENST00000504788 PPDPFQ9H3Y8 114 aa3.06□□□□□ -1.92
LMNB1-208ENST00000504788 A0A0U1RRA0 63 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-208ENST00000504788 HNRNPA3P51991 378 aaKnown RBP3.05□□□□□ -1.92
LMNB1-208ENST00000504788 SPANXDQ9BXN6 97 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 SPANXCQ9NY87 97 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 IGKV2-28A0A075B6P5 120 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 IGKV2D-28P01615 120 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 PRR3P79522 188 aaKnown RBP3.05□□□□□ -1.92
LMNB1-208ENST00000504788 SPATA45Q537H7 98 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 PHF5AQ7RTV0 110 aaKnown RBP3.05□□□□□ -1.92
LMNB1-208ENST00000504788 LINC00308Q8TCZ7 52 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 SPANXB1Q9NS25 103 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-208ENST00000504788 PKIGQ9Y2B9 76 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 PAM16Q9Y3D7 125 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 C22orf24Q9Y442 160 aa3.05□□□□□ -1.92
LMNB1-208ENST00000504788 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
LMNB1-208ENST00000504788 LINC00158P58513 81 aa3.04□□□□□ -1.92
LMNB1-208ENST00000504788 LBHQ53QV2 105 aaPredicted RBP3.04□□□□□ -1.92
LMNB1-208ENST00000504788 MEIG1Q5JSS6 88 aa3.04□□□□□ -1.92
LMNB1-208ENST00000504788 KRTAP13-1Q8IUC0 172 aa3.04□□□□□ -1.92
LMNB1-208ENST00000504788 C7orf33Q8WU49 177 aa3.04□□□□□ -1.92
LMNB1-208ENST00000504788 C14orf144Q96I85 54 aa3.04□□□□□ -1.92
LMNB1-208ENST00000504788 LINC00167Q96N53 147 aa3.04□□□□□ -1.92
LMNB1-208ENST00000504788 TNXBP22105 4242 aa3.03□□□□□ -1.92
LMNB1-208ENST00000504788 IGLV1-50A0A075B6I6 118 aa3.03□□□□□ -1.92
LMNB1-208ENST00000504788 M0QXV9 152 aa3.03□□□□□ -1.92
LMNB1-208ENST00000504788 NDUFC2O95298 119 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms