RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SMIM11BQ8TCY0 68 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 RNF5Q99942 180 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 PSORS1C2Q9UIG4 136 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 MYO7AQ13402 2215 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGKV2-40A0A087WW87 121 aaPredicted RBP1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGKV3OR2-268A0A0C4DH90 116 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 LINC00959A0A1B0GUT2 108 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 H3BRN7 92 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 H3BSH0 61 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGKV2D-40P01614 121 aaPredicted RBP1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 ST20-AS1Q8NBB2 130 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 PATE1Q8WXA2 126 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 ARFGEF3Q5TH69 2177 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 MUC4Q99102 2169 aa1.13□□□□□ -2.23
HMGB3P17-201ENST00000504195 TRGV1A0A0A0MS02 117 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 LINC00158P58513 81 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 Q6ZQY7 126 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 Q6ZTI0 123 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 MINOS1-NBL1R4GNA1 71 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 COL4A5P29400 1685 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 MYO7BQ6PIF6 2116 aa1.12□□□□□ -2.23
HMGB3P17-201ENST00000504195 TET2Q6N021 2002 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 INTS1Q8N201 2190 aaKnown RBP1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 A0A087WTM6 91 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 A0A1B0GU69 56 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 A0A1W2PNN7 141 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 LYNX1G3V0Z9 82 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 RNASE3P12724 160 aaKnown RBP1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 LINC00575Q6W349 94 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 Q8IZM0 81 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 TMEM167AQ8TBQ9 72 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 LINC00472Q9H8W2 130 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 TP53AIP1Q9HCN2 124 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 PRO2289Q9P1D8 64 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 MED12Q93074 2177 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 OTOGLQ3ZCN5 2332 aa1.11□□□□□ -2.23
HMGB3P17-201ENST00000504195 FREM3P0C091 2139 aa1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 A0A0G2JQZ4 141 aa1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 LY6G6CO95867 125 aa1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 ANGP03950 147 aaKnown RBP1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 SPINK9Q5DT21 86 aa1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 SPINT4Q6UDR6 99 aa1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 RPL39LQ96EH5 51 aaKnown RBP1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 CR1P17927 2039 aa1.1□□□□□ -2.23
HMGB3P17-201ENST00000504195 CABIN1Q9Y6J0 2220 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 SPTBP11277 2137 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 PI4KAP42356 2102 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 SHANK1Q9Y566 2161 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGLV5-48A0A075B6I7 105 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 M0QY20 66 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 RPL37AP61513 92 aaKnown RBP1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 RPL39P62891 51 aaKnown RBP1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB116Q30KQ4 102 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 CDKN2A-AS1Q9UH64 79 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 CCL26Q9Y258 94 aa1.09□□□□□ -2.23
HMGB3P17-201ENST00000504195 COL27A1Q8IZC6 1860 aaPredicted RBP1.09□□□□□ -2.24
HMGB3P17-201ENST00000504195 ARHGAP32A7KAX9 2087 aa1.09□□□□□ -2.24
HMGB3P17-201ENST00000504195 A0A096LNT2 108 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 NBDYA0A0U1RRE5 68 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 K7EIM0 57 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 HRES1P13985 223 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 ACYP2P14621 99 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 WT1-ASQ06250 92 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 LY6EQ16553 131 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 ZGRF1Q86YA3 2104 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 C5orf56Q8N8D9 126 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 Q96NJ1 140 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 MED13Q9UHV7 2174 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 FBN1P35555 2871 aaKnown RBP1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 HEATR5BQ9P2D3 2071 aa1.08□□□□□ -2.24
HMGB3P17-201ENST00000504195 PLXNB1O43157 2135 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 SPTY2D1-AS1A0A0U1RR47 76 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 I3L2K1 104 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 IGLV6-57P01721 117 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 KRTAP12-4P60329 112 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 KLK9Q2XQG4 91 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 COX6B2Q6YFQ2 88 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 LINC00304Q8N9R0 145 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 CCL19Q99731 98 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 MALRD1Q5VYJ5 2156 aa1.07□□□□□ -2.24
HMGB3P17-201ENST00000504195 M0R2N4 97 aa1.06□□□□□ -2.24
HMGB3P17-201ENST00000504195 INE1O15225 51 aa1.06□□□□□ -2.24
HMGB3P17-201ENST00000504195 C10orf55Q5SWW7 151 aa1.06□□□□□ -2.24
HMGB3P17-201ENST00000504195 COX14Q96I36 57 aa1.06□□□□□ -2.24
HMGB3P17-201ENST00000504195 ZNF407Q9C0G0 2248 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 IGKV2-24A0A0C4DH68 120 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 K7EQZ3 153 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 DEFB131AP59861 70 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 DEFB134Q4QY38 66 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 RPL39P5Q59GN2 51 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 C10orf99Q6UWK7 81 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 C6orf48Q9UBA6 75 aa1.05□□□□□ -2.24
HMGB3P17-201ENST00000504195 SVILO95425 2214 aa1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 GOLGA4Q13439 2230 aaKnown RBP1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 BPTFQ12830 3046 aa1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 MINOS1Q5TGZ0 78 aa1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 IGFL1Q6UW32 110 aa1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 R4GN34 69 aa1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 CACNA1DQ01668 2161 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms