RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 COX6CP09669 75 aa5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 WFDC2Q14508 124 aa5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 Q6ZRP5 223 aa5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 H3BUT2 72 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 TSPAN13O95857 204 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 FABP2P12104 132 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 RPL13AP40429 203 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 Q1RN00 199 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 GAGE2EQ4V326 116 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 LINC00474Q9P2X8 69 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 GAGE2DQ9UEU5 116 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 PLA2G2DQ9UNK4 145 aa5.28□□□□□ -1.56
TOPBP1-202ENST00000503338 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
TOPBP1-202ENST00000503338 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
TOPBP1-202ENST00000503338 C16orf90A8MZG2 172 aa5.27□□□□□ -1.57
TOPBP1-202ENST00000503338 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
TOPBP1-202ENST00000503338 C9orf163Q8N9P6 203 aa5.27□□□□□ -1.57
TOPBP1-202ENST00000503338 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 TRBV20-1A0A075B6N2 111 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 LCE6AA0A183 80 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 PSMB2P49721 201 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 VAMP3Q15836 100 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 S100A7L2Q5SY68 101 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 GTF2H5Q6ZYL4 71 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 OR13C6PQ8NH95 151 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 XAGE1AQ9HD64 81 aa5.26□□□□□ -1.57
TOPBP1-202ENST00000503338 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 A0A1B0GV90 55 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 H7C2G1 150 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 M0R378 163 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 SCGB1C2P0DMR2 95 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 VPREB1P12018 145 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 GAGE2BQ13066 116 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 LINC00337Q8N6G1 96 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 NKAPP1Q8N9T2 125 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 TGP01266 2768 aa5.25□□□□□ -1.57
TOPBP1-202ENST00000503338 GAGE10A6NGK3 116 aa5.24□□□□□ -1.57
TOPBP1-202ENST00000503338 C9orf129Q5T035 196 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-202ENST00000503338 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
TOPBP1-202ENST00000503338 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
TOPBP1-202ENST00000503338 H0YGX0 51 aa5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 NCR3O14931 201 aa5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 TRIAP1O43715 76 aa5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 IGLV6-57P01721 117 aa5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 LINC00336Q6ZUF6 198 aa5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 SPCS1Q9Y6A9 102 aa5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-202ENST00000503338 IGLV5-52A0A0A0MRZ9 124 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 K7EP34 96 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 RTL8CO15255 209 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 SNCGO76070 127 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 SDIM1Q6ZPB5 146 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 NAA38Q9BRA0 125 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 LYSTQ99698 3801 aa5.22□□□□□ -1.57
TOPBP1-202ENST00000503338 A0A096LNI7 61 aa5.21□□□□□ -1.58
TOPBP1-202ENST00000503338 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-202ENST00000503338 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
TOPBP1-202ENST00000503338 ATXN8Q156A1 80 aa5.21□□□□□ -1.58
TOPBP1-202ENST00000503338 Q8NDZ9 215 aa5.21□□□□□ -1.58
TOPBP1-202ENST00000503338 TRAV23DV6A0A075B6W5 121 aa5.2□□□□□ -1.58
TOPBP1-202ENST00000503338 IGKV2-24A0A0C4DH68 120 aa5.2□□□□□ -1.58
TOPBP1-202ENST00000503338 TRBV7-6A0A0J9YX20 115 aa5.2□□□□□ -1.58
TOPBP1-202ENST00000503338 TRBV10-3A0A0K0K1G6 114 aa5.2□□□□□ -1.58
TOPBP1-202ENST00000503338 A0A1B0GX51 115 aa5.2□□□□□ -1.58
TOPBP1-202ENST00000503338 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-202ENST00000503338 SERTAD4-AS1Q5TG53 156 aa5.19□□□□□ -1.58
TOPBP1-202ENST00000503338 DIRC1Q969H9 104 aa5.19□□□□□ -1.58
TOPBP1-202ENST00000503338 KCNQ1DNQ9H478 68 aa5.19□□□□□ -1.58
TOPBP1-202ENST00000503338 C22orf24Q9Y442 160 aa5.19□□□□□ -1.58
TOPBP1-202ENST00000503338 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 M0QXV9 152 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 LST1O00453 97 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 PRYO14603 147 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 ZNF73O43830 326 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 TCL1BO95988 128 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 TRACP01848 142 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 FAM19A5Q7Z5A7 132 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 C7orf33Q8WU49 177 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 DPH3Q96FX2 82 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 DNAH1Q9P2D7 4330 aa5.18□□□□□ -1.58
TOPBP1-202ENST00000503338 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
TOPBP1-202ENST00000503338 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
TOPBP1-202ENST00000503338 F8W1H4 67 aa5.17□□□□□ -1.58
TOPBP1-202ENST00000503338 C6orf99Q4VX62 202 aa5.17□□□□□ -1.58
TOPBP1-202ENST00000503338 LINC00167Q96N53 147 aa5.17□□□□□ -1.58
TOPBP1-202ENST00000503338 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
TOPBP1-202ENST00000503338 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 FAM168BA1KXE4 195 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 EPM2AB3EWF7 344 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 H3BMG7 143 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 SLC25A20O43772 301 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 DNAL4O96015 105 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 GHRHP01286 108 aa5.16□□□□□ -1.58
TOPBP1-202ENST00000503338 DNAH6Q9C0G6 4158 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms