RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	MT3	P25713	68 aa		4.75	□□□□□ -1.65
GARNL3-222	ENST00000498801	SYCN	Q0VAF6	134 aa		4.75	□□□□□ -1.65
GARNL3-222	ENST00000498801	C6orf226	Q5I0X4	101 aa		4.75	□□□□□ -1.65
GARNL3-222	ENST00000498801	NDUFA1	O15239	70 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	CXCL5	P42830	114 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	AKR1D1	P51857	326 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	CKS1B	P61024	79 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	HERVK_113	P61574	105 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	C2orf82	Q6UX34	121 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801		Q6ZRU5	148 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	ATOH7	Q8N100	152 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	CARD19	Q96LW7	228 aa		4.74	□□□□□ -1.65
GARNL3-222	ENST00000498801	LINC01620	Q4KN68	170 aa		4.73	□□□□□ -1.65
GARNL3-222	ENST00000498801	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.73	□□□□□ -1.65
GARNL3-222	ENST00000498801	C9orf163	Q8N9P6	203 aa		4.73	□□□□□ -1.65
GARNL3-222	ENST00000498801	DNAH11	Q96DT5	4516 aa		4.73	□□□□□ -1.65
GARNL3-222	ENST00000498801		E9PLD3	99 aa		4.72	□□□□□ -1.65
GARNL3-222	ENST00000498801	LEPROT	O15243	131 aa		4.72	□□□□□ -1.65
GARNL3-222	ENST00000498801	KRTAP10-1	P60331	282 aa		4.72	□□□□□ -1.65
GARNL3-222	ENST00000498801	PLEKHB2	Q96CS7	222 aa		4.72	□□□□□ -1.65
GARNL3-222	ENST00000498801	C6orf48	Q9UBA6	75 aa		4.72	□□□□□ -1.65
GARNL3-222	ENST00000498801	TRBV30	A0A0K0K1B3	111 aa		4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801		J3QQQ9	107 aa		4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	LGALS3	P17931	250 aa	Known RBP	4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	TSPEAR-AS2	P59090	65 aa		4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	CIRBP	Q14011	172 aa	Known RBP	4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	JOSD1	Q15040	202 aa	Predicted RBP	4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	SFTA2	Q6UW10	78 aa		4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	SDIM1	Q6ZPB5	146 aa		4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	ZNF625	Q96I27	306 aa	Predicted RBP	4.71	□□□□□ -1.66
GARNL3-222	ENST00000498801	IGKV2D-26	A0A0A0MRZ7	120 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801		A0A0U1RRA0	63 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801	HSBP1L1	C9JCN9	74 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801	MAJIN	Q3KP22	176 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801		Q8NBF4	154 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801	NDUFA12	Q9UI09	145 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801	PKIG	Q9Y2B9	76 aa		4.7	□□□□□ -1.66
GARNL3-222	ENST00000498801	LOC107984640	A0A0U1RRK4	108 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	MYMX	A0A1B0GTQ4	84 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	NDUFAF8	A1L188	74 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	TLX1NB	P0CAT3	122 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	NMU	P48645	174 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	C9orf116	Q5BN46	136 aa	Predicted RBP	4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	PYY3	Q5JQD4	70 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	HERC2	O95714	4834 aa		4.69	□□□□□ -1.66
GARNL3-222	ENST00000498801	LRP1B	Q9NZR2	4599 aa		4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801	KIAA1109	Q2LD37	5005 aa		4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801		A0A096LNI7	61 aa		4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801	NDUFC2-KCTD14	E9PQ53	114 aa		4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801	RPL18A	Q02543	176 aa	Known RBP	4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801	ERG28	Q9UKR5	140 aa		4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801	DYNC1H1	Q14204	4646 aa	Known RBP	4.68	□□□□□ -1.66
GARNL3-222	ENST00000498801	IGKV2-24	A0A0C4DH68	120 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	ZNF815P	A8K554	130 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	PANO1	I0J062	215 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	CHTF8	P0CG12	524 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	PFN2	P35080	140 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	COX17	Q14061	63 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	MEIG1	Q5JSS6	88 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	SPACA4	Q8TDM5	124 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	KRTAP2-2	Q9BYT5	123 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	TTTY13	Q9BZ97	58 aa		4.67	□□□□□ -1.66
GARNL3-222	ENST00000498801	DNAH5	Q8TE73	4624 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801		A0A0J9YXY3	114 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	LINC00587	B1AMM8	73 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	EPM2A	B3EWF7	344 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	LINC00158	P58513	81 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	PCP2	Q8IVA1	136 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	VAMP8	Q9BV40	100 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	LINC00474	Q9P2X8	69 aa		4.66	□□□□□ -1.66
GARNL3-222	ENST00000498801	LOC105371267	A0A1B0GV96	52 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	SMIM13	P0DJ93	91 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	NDUFV3	P56181	108 aa	Known RBP	4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	SPATA45	Q537H7	98 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	SCX	Q7RTU7	201 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	DPH3	Q96FX2	82 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	KRTAP17-1	Q9BYP8	105 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	XAGE1A	Q9HD64	81 aa		4.65	□□□□□ -1.67
GARNL3-222	ENST00000498801	C9orf129	Q5T035	196 aa	Known RBP	4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	SCGB1D4	Q6XE38	83 aa		4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	KRTAP7-1	Q8IUC3	87 aa		4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	MIR7-3HG	Q8N6C7	128 aa		4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	CIRBP-AS1	Q8TBR5	109 aa		4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	SND1-IT1	Q9HBX3	110 aa		4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	RYR1	P21817	5038 aa		4.64	□□□□□ -1.67
GARNL3-222	ENST00000498801	TIMM17B	O60830	172 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	SMIM6	P0DI80	62 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	COX8A	P10176	69 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	HAMP	P81172	84 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	KRTAP5-3	Q6L8H2	238 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	LINC00518	Q8N0U6	118 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	DAND5	Q8N907	189 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	OCR1	Q9BZK8	76 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	PLAC8	Q9NZF1	115 aa		4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	APOB	P04114	4563 aa	Known RBP	4.63	□□□□□ -1.67
GARNL3-222	ENST00000498801	HSPG2	P98160	4391 aa		4.62	□□□□□ -1.67
GARNL3-222	ENST00000498801		A0A1W2PNN7	141 aa		4.62	□□□□□ -1.67
GARNL3-222	ENST00000498801	FAM168B	A1KXE4	195 aa		4.62	□□□□□ -1.67
GARNL3-222	ENST00000498801	S100A12	P80511	92 aa		4.62	□□□□□ -1.67
GARNL3-222	ENST00000498801	BOD1L2	Q8IYS8	172 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms