RNA–Protein interactions for RNA: ENST00000495517.5

RBM41-208, Transcript of RNA binding motif protein 41, human

TSL 2

Gene RBM41, Length 3,315 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM41-208	ENST00000495517	CSMD3	Q7Z407	3707 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	IGLV4-60	A0A075B6I1	120 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	IGLV5-37	A0A075B6J1	123 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	IGLV9-49	A0A0B4J1Y8	123 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	TTC32	Q5I0X7	151 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517		Q6ZR54	194 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	LINC00588	Q9Y4M8	146 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	IGHV3-73	A0A0B4J1V6	119 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	NDUFC2	O95298	119 aa		4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	NANOS2	P60321	138 aa	Known RBP	4.6	□□□□□ -1.67
RBM41-208	ENST00000495517	DNHD1	Q96M86	4753 aa		4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	HTN1	P15515	57 aa		4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	CNBP	P62633	177 aa	Known RBP	4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	SOSTDC1	Q6X4U4	206 aa		4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	SORL1	Q92673	2214 aa		4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	C4orf26	Q17RF5	130 aa		4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	DNAH10	Q8IVF4	4471 aa		4.59	□□□□□ -1.67
RBM41-208	ENST00000495517	REG3A	Q06141	175 aa		4.59	□□□□□ -1.68
RBM41-208	ENST00000495517		Q6ZRN7	208 aa	Predicted RBP	4.59	□□□□□ -1.68
RBM41-208	ENST00000495517	STARD9	Q9P2P6	4700 aa		4.58	□□□□□ -1.68
RBM41-208	ENST00000495517	ACYP1	P07311	99 aa		4.58	□□□□□ -1.68
RBM41-208	ENST00000495517	CCL18	P55774	89 aa		4.58	□□□□□ -1.68
RBM41-208	ENST00000495517	COX6A2	Q02221	97 aa		4.58	□□□□□ -1.68
RBM41-208	ENST00000495517	REG3G	Q6UW15	175 aa		4.58	□□□□□ -1.68
RBM41-208	ENST00000495517	C2orf82	Q6UX34	121 aa		4.58	□□□□□ -1.68
RBM41-208	ENST00000495517	SNCG	O76070	127 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	CLEC2B	Q92478	149 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	PKHD1L1	Q86WI1	4243 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	IGHV3-38	A0A0C4DH36	116 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	FAM19A1	Q7Z5A9	133 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	COX7A2L	O14548	114 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	TRAC	P01848	142 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	CDKN2A-AS1	Q9UH64	79 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	NDUFA12	Q9UI09	145 aa		4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	PLEC	Q15149	4684 aa	Known RBP	4.57	□□□□□ -1.68
RBM41-208	ENST00000495517	LINC00308	Q8TCZ7	52 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	COX7B2	Q8TF08	81 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	TMEM126A	Q9H061	195 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	DAND5	Q8N907	189 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	C14orf177	Q52M58	125 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	DEFB104A	Q8WTQ1	72 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	CHCHD5	Q9BSY4	110 aa		4.56	□□□□□ -1.68
RBM41-208	ENST00000495517	PKD1L1	Q8TDX9	2849 aa		4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	LINC00526	Q96FQ7	95 aa		4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	PRAC1	Q96KF2	57 aa		4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	TRBV7-6	A0A0J9YX20	115 aa		4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	C15orf56	Q8N910	161 aa		4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	LINC00167	Q96N53	147 aa		4.55	□□□□□ -1.68
RBM41-208	ENST00000495517	CIRBP	Q14011	172 aa	Known RBP	4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	MTOR	P42345	2549 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	CRYGA	P11844	174 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	LINC00643	Q86TS7	51 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	HECTD4	Q9Y4D8	3996 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	COL7A1	Q02388	2944 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517		A0A1B0GX51	115 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	RPL28	P46779	137 aa	Known RBP	4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	WFDC10B	Q8IUB3	73 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	LINC00476	Q8WZB0	136 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	PRO0628	Q9UI54	55 aa		4.54	□□□□□ -1.68
RBM41-208	ENST00000495517	IGKV2-28	A0A075B6P5	120 aa		4.53	□□□□□ -1.68
RBM41-208	ENST00000495517	IGKV2D-28	P01615	120 aa		4.53	□□□□□ -1.68
RBM41-208	ENST00000495517	C3orf22	Q8N5N4	141 aa		4.53	□□□□□ -1.68
RBM41-208	ENST00000495517	OR13C6P	Q8NH95	151 aa		4.53	□□□□□ -1.68
RBM41-208	ENST00000495517	LRCOL1	A6NCL2	159 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	DEFB4A	O15263	64 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	RPS28	P62857	69 aa	Known RBP	4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	MEIG1	Q5JSS6	88 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	C9orf129	Q5T035	196 aa	Known RBP	4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	LINC00269	Q8N2A0	174 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	CYSTM1	Q9H1C7	97 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	NBDY	A0A0U1RRE5	68 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	CDK2AP2	O75956	126 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	IGLV10-54	A0A075B6I4	117 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	ATR	Q13535	2644 aa		4.52	□□□□□ -1.69
RBM41-208	ENST00000495517	MEGF8	Q7Z7M0	2845 aa		4.51	□□□□□ -1.69
RBM41-208	ENST00000495517	PKD1	P98161	4303 aa		4.51	□□□□□ -1.69
RBM41-208	ENST00000495517	UQCRQ	O14949	82 aa		4.51	□□□□□ -1.69
RBM41-208	ENST00000495517	IGLV5-52	A0A0A0MRZ9	124 aa		4.51	□□□□□ -1.69
RBM41-208	ENST00000495517		H7C2G1	150 aa		4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	FAT2	Q9NYQ8	4349 aa		4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	CRP	P02741	224 aa		4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	ANG	P03950	147 aa	Known RBP	4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	COX6C	P09669	75 aa		4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	RNASE13	Q5GAN3	156 aa	Known RBP	4.5	□□□□□ -1.69
RBM41-208	ENST00000495517	LINC00337	Q8N6G1	96 aa		4.5	□□□□□ -1.69
RBM41-208	ENST00000495517		Q9HAA7	133 aa		4.5	□□□□□ -1.69
RBM41-208	ENST00000495517		H3BQ85	93 aa		4.49	□□□□□ -1.69
RBM41-208	ENST00000495517	COX7C	P15954	63 aa		4.49	□□□□□ -1.69
RBM41-208	ENST00000495517	C1orf195	Q5TG92	126 aa		4.49	□□□□□ -1.69
RBM41-208	ENST00000495517	FAM236A	A0A1B0GUQ0	79 aa		4.49	□□□□□ -1.69
RBM41-208	ENST00000495517	FAM236B	A0A1B0GV22	79 aa		4.49	□□□□□ -1.69
RBM41-208	ENST00000495517	CASC10	Q5T4H9	136 aa		4.49	□□□□□ -1.69
RBM41-208	ENST00000495517		Q6JHZ5	121 aa		4.48	□□□□□ -1.69
RBM41-208	ENST00000495517	DNAH11	Q96DT5	4516 aa		4.48	□□□□□ -1.69
RBM41-208	ENST00000495517		Q1RN00	199 aa		4.48	□□□□□ -1.69
RBM41-208	ENST00000495517	NDUFC2-KCTD14	E9PQ53	114 aa		4.47	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms